RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 WFDC10AQ9H1F0 79 aa4.21□□□□□ -1.74
UBQLN4-202ENST00000459954 ANK2Q01484 3957 aa4.21□□□□□ -1.74
UBQLN4-202ENST00000459954 GVQW2A0A096LPI5 108 aaPredicted RBP4.2□□□□□ -1.74
UBQLN4-202ENST00000459954 IGKV3OR2-268A0A0C4DH90 116 aa4.2□□□□□ -1.74
UBQLN4-202ENST00000459954 A0A0J9YWU9 116 aa4.2□□□□□ -1.74
UBQLN4-202ENST00000459954 GHRHP01286 108 aa4.2□□□□□ -1.74
UBQLN4-202ENST00000459954 IGHV4-30-4P0DP06 118 aa4.2□□□□□ -1.74
UBQLN4-202ENST00000459954 DEFB130BP0DP73 79 aa4.2□□□□□ -1.74
UBQLN4-202ENST00000459954 DEFB130AP0DP74 79 aa4.2□□□□□ -1.74
UBQLN4-202ENST00000459954 C9orf153Q5TBE3 101 aa4.2□□□□□ -1.74
UBQLN4-202ENST00000459954 SMIM20Q8N5G0 67 aa4.2□□□□□ -1.74
UBQLN4-202ENST00000459954 C14orf132Q9NPU4 83 aa4.2□□□□□ -1.74
UBQLN4-202ENST00000459954 LINC00846Q9NV44 126 aa4.2□□□□□ -1.74
UBQLN4-202ENST00000459954 FBN3Q75N90 2809 aa4.2□□□□□ -1.74
UBQLN4-202ENST00000459954 TRRAPQ9Y4A5 3859 aa4.19□□□□□ -1.74
UBQLN4-202ENST00000459954 MIFP14174 115 aa4.19□□□□□ -1.74
UBQLN4-202ENST00000459954 PDE6GP18545 87 aa4.19□□□□□ -1.74
UBQLN4-202ENST00000459954 XCL1P47992 114 aa4.19□□□□□ -1.74
UBQLN4-202ENST00000459954 APOC4P55056 127 aa4.19□□□□□ -1.74
UBQLN4-202ENST00000459954 RPS28P62857 69 aaKnown RBP4.19□□□□□ -1.74
UBQLN4-202ENST00000459954 EGFEM1PQ0D2K5 195 aa4.19□□□□□ -1.74
UBQLN4-202ENST00000459954 SERP2Q8N6R1 65 aa4.19□□□□□ -1.74
UBQLN4-202ENST00000459954 CHCHD10Q8WYQ3 142 aaPredicted RBP4.19□□□□□ -1.74
UBQLN4-202ENST00000459954 C1orf43Q9BWL3 253 aa4.19□□□□□ -1.74
UBQLN4-202ENST00000459954 NOTCH1P46531 2555 aa4.19□□□□□ -1.74
UBQLN4-202ENST00000459954 LOC110117498A0A087WWA1 95 aa4.18□□□□□ -1.74
UBQLN4-202ENST00000459954 TRBV7-6A0A0J9YX20 115 aa4.18□□□□□ -1.74
UBQLN4-202ENST00000459954 REG3AQ06141 175 aa4.18□□□□□ -1.74
UBQLN4-202ENST00000459954 C9orf129Q5T035 196 aaKnown RBP4.18□□□□□ -1.74
UBQLN4-202ENST00000459954 LELP1Q5T871 98 aa4.18□□□□□ -1.74
UBQLN4-202ENST00000459954 LINC00575Q6W349 94 aa4.18□□□□□ -1.74
UBQLN4-202ENST00000459954 PRR34Q9NV39 138 aa4.18□□□□□ -1.74
UBQLN4-202ENST00000459954 hADV29S1A0JD25 119 aa4.17□□□□□ -1.74
UBQLN4-202ENST00000459954 NCR3O14931 201 aa4.17□□□□□ -1.74
UBQLN4-202ENST00000459954 IGLV6-57P01721 117 aa4.17□□□□□ -1.74
UBQLN4-202ENST00000459954 LINC00269Q8N2A0 174 aa4.17□□□□□ -1.74
UBQLN4-202ENST00000459954 C6orf223Q8N319 242 aa4.17□□□□□ -1.74
UBQLN4-202ENST00000459954 NDUFC2-KCTD14E9PQ53 114 aa4.16□□□□□ -1.74
UBQLN4-202ENST00000459954 H3BNG1 76 aa4.16□□□□□ -1.74
UBQLN4-202ENST00000459954 ANGP03950 147 aaKnown RBP4.16□□□□□ -1.74
UBQLN4-202ENST00000459954 DAD1P61803 113 aa4.16□□□□□ -1.74
UBQLN4-202ENST00000459954 UBL5Q9BZL1 73 aa4.16□□□□□ -1.74
UBQLN4-202ENST00000459954 USP17L23D6RBM5 183 aa4.15□□□□□ -1.75
UBQLN4-202ENST00000459954 SLPIP03973 132 aa4.15□□□□□ -1.75
UBQLN4-202ENST00000459954 SPART-AS1P0CW21 52 aa4.15□□□□□ -1.75
UBQLN4-202ENST00000459954 TMEM258P61165 79 aa4.15□□□□□ -1.75
UBQLN4-202ENST00000459954 RBM3P98179 157 aaKnown RBP4.15□□□□□ -1.75
UBQLN4-202ENST00000459954 SPAG11BQ08648 103 aa4.15□□□□□ -1.75
UBQLN4-202ENST00000459954 C6orf99Q4VX62 202 aa4.15□□□□□ -1.75
UBQLN4-202ENST00000459954 Q6ZQT0 140 aa4.15□□□□□ -1.75
UBQLN4-202ENST00000459954 Q8NAQ8 132 aa4.15□□□□□ -1.75
UBQLN4-202ENST00000459954 UPK3BQ9BT76 320 aa4.15□□□□□ -1.75
UBQLN4-202ENST00000459954 V9GYY9 64 aa4.15□□□□□ -1.75
UBQLN4-202ENST00000459954 MEGF8Q7Z7M0 2845 aa4.15□□□□□ -1.75
UBQLN4-202ENST00000459954 IGKV3D-7A0A0C4DH55 119 aa4.14□□□□□ -1.75
UBQLN4-202ENST00000459954 J3KT08 172 aa4.14□□□□□ -1.75
UBQLN4-202ENST00000459954 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.14□□□□□ -1.75
UBQLN4-202ENST00000459954 C11orf68Q9H3H3 251 aaKnown RBP4.14□□□□□ -1.75
UBQLN4-202ENST00000459954 CXCL6P80162 114 aa4.13□□□□□ -1.75
UBQLN4-202ENST00000459954 CLPSL2Q6UWE3 100 aa4.13□□□□□ -1.75
UBQLN4-202ENST00000459954 UNQ6190/PRO20217Q6UXQ8 127 aa4.13□□□□□ -1.75
UBQLN4-202ENST00000459954 DNHD1Q96M86 4753 aa4.13□□□□□ -1.75
UBQLN4-202ENST00000459954 A0A096LPF7 62 aa4.12□□□□□ -1.75
UBQLN4-202ENST00000459954 LOC107984640A0A0U1RRK4 108 aa4.12□□□□□ -1.75
UBQLN4-202ENST00000459954 PRR3P79522 188 aaKnown RBP4.12□□□□□ -1.75
UBQLN4-202ENST00000459954 DEFB135Q30KP9 77 aa4.12□□□□□ -1.75
UBQLN4-202ENST00000459954 ENHOQ6UWT2 76 aa4.12□□□□□ -1.75
UBQLN4-202ENST00000459954 DIRC1Q969H9 104 aa4.12□□□□□ -1.75
UBQLN4-202ENST00000459954 TRAV7A0A075B6U4 112 aa4.11□□□□□ -1.75
UBQLN4-202ENST00000459954 TRAV23DV6A0A075B6W5 121 aa4.11□□□□□ -1.75
UBQLN4-202ENST00000459954 TRBV7-4A0A0J9YYF1 115 aa4.11□□□□□ -1.75
UBQLN4-202ENST00000459954 M0R378 163 aa4.11□□□□□ -1.75
UBQLN4-202ENST00000459954 ELOF1P60002 83 aaKnown RBP4.11□□□□□ -1.75
UBQLN4-202ENST00000459954 C9orf116Q5BN46 136 aaPredicted RBP4.11□□□□□ -1.75
UBQLN4-202ENST00000459954 C10orf25Q5T742 122 aa4.11□□□□□ -1.75
UBQLN4-202ENST00000459954 Q8NDZ9 215 aa4.11□□□□□ -1.75
UBQLN4-202ENST00000459954 DSCR8Q96T75 97 aa4.11□□□□□ -1.75
UBQLN4-202ENST00000459954 IGLV10-54A0A075B6I4 117 aa4.1□□□□□ -1.75
UBQLN4-202ENST00000459954 A0A1B0GW54 56 aa4.1□□□□□ -1.75
UBQLN4-202ENST00000459954 COX7BP24311 80 aa4.1□□□□□ -1.75
UBQLN4-202ENST00000459954 C4orf48Q5BLP8 95 aa4.1□□□□□ -1.75
UBQLN4-202ENST00000459954 B9D2Q9BPU9 175 aa4.1□□□□□ -1.75
UBQLN4-202ENST00000459954 C6orf48Q9UBA6 75 aa4.1□□□□□ -1.75
UBQLN4-202ENST00000459954 LAMTOR3Q9UHA4 124 aa4.1□□□□□ -1.75
UBQLN4-202ENST00000459954 KLK12Q9UKR0 248 aa4.1□□□□□ -1.75
UBQLN4-202ENST00000459954 CELA1Q9UNI1 258 aa4.1□□□□□ -1.75
UBQLN4-202ENST00000459954 A0A087WVE0 104 aa4.09□□□□□ -1.75
UBQLN4-202ENST00000459954 ZNF73O43830 326 aaPredicted RBP4.09□□□□□ -1.75
UBQLN4-202ENST00000459954 VPREB1P12018 145 aa4.09□□□□□ -1.75
UBQLN4-202ENST00000459954 LINC01547P58512 204 aaPredicted RBP4.09□□□□□ -1.75
UBQLN4-202ENST00000459954 KRTAP10-11P60412 298 aa4.09□□□□□ -1.75
UBQLN4-202ENST00000459954 KRTAP26-1Q6PEX3 210 aa4.09□□□□□ -1.75
UBQLN4-202ENST00000459954 Q6ZQY7 126 aa4.09□□□□□ -1.75
UBQLN4-202ENST00000459954 Q6ZVQ6 151 aa4.09□□□□□ -1.75
UBQLN4-202ENST00000459954 DPH3Q96FX2 82 aa4.09□□□□□ -1.75
UBQLN4-202ENST00000459954 FAM19A1Q7Z5A9 133 aa4.08□□□□□ -1.76
UBQLN4-202ENST00000459954 LINC00528Q8N1L1 170 aa4.08□□□□□ -1.76
UBQLN4-202ENST00000459954 Q8N3U1 123 aa4.08□□□□□ -1.76
UBQLN4-202ENST00000459954 PRO0628Q9UI54 55 aa4.08□□□□□ -1.76
UBQLN4-202ENST00000459954 DEFB4AO15263 64 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms