RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 PLEKHB2Q96CS7 222 aa7.5□□□□□ -1.21
CNOT3-205ENST00000457463 PLA2G2DQ9UNK4 145 aa7.5□□□□□ -1.21
CNOT3-205ENST00000457463 GAGE10A6NGK3 116 aa7.49□□□□□ -1.21
CNOT3-205ENST00000457463 SRSF9Q13242 221 aaKnown RBP eCLIP7.49□□□□□ -1.21
CNOT3-205ENST00000457463 SFTA2Q6UW10 78 aa7.49□□□□□ -1.21
CNOT3-205ENST00000457463 HIST1H2BLQ99880 126 aa7.49□□□□□ -1.21
CNOT3-205ENST00000457463 IGKV2D-26A0A0A0MRZ7 120 aa7.48□□□□□ -1.21
CNOT3-205ENST00000457463 MYMXA0A1B0GTQ4 84 aa7.48□□□□□ -1.21
CNOT3-205ENST00000457463 E9PLD3 99 aa7.48□□□□□ -1.21
CNOT3-205ENST00000457463 VPREB1P12018 145 aa7.48□□□□□ -1.21
CNOT3-205ENST00000457463 LGALS3P17931 250 aaKnown RBP7.48□□□□□ -1.21
CNOT3-205ENST00000457463 SNRPEP62304 92 aaKnown RBP7.48□□□□□ -1.21
CNOT3-205ENST00000457463 MRPL55Q7Z7F7 128 aaKnown RBP7.48□□□□□ -1.21
CNOT3-205ENST00000457463 ATOH7Q8N100 152 aa7.48□□□□□ -1.21
CNOT3-205ENST00000457463 MIR7-3HGQ8N6C7 128 aa7.48□□□□□ -1.21
CNOT3-205ENST00000457463 DAND5Q8N907 189 aa7.48□□□□□ -1.21
CNOT3-205ENST00000457463 LINC00167Q96N53 147 aa7.48□□□□□ -1.21
CNOT3-205ENST00000457463 IGLV5-37A0A075B6J1 123 aa7.47□□□□□ -1.21
CNOT3-205ENST00000457463 RPL37AP8A6NKH3 93 aa7.47□□□□□ -1.21
CNOT3-205ENST00000457463 HERV-K104P63124 156 aa7.47□□□□□ -1.21
CNOT3-205ENST00000457463 TTTY13Q9BZ97 58 aa7.47□□□□□ -1.21
CNOT3-205ENST00000457463 KRTAP29-1A8MX34 341 aaPredicted RBP7.46□□□□□ -1.22
CNOT3-205ENST00000457463 S100A6P06703 90 aa7.46□□□□□ -1.22
CNOT3-205ENST00000457463 TP73-AS1Q9UF72 201 aa7.46□□□□□ -1.22
CNOT3-205ENST00000457463 IGLV7-43P04211 117 aa7.45□□□□□ -1.22
CNOT3-205ENST00000457463 S100A2P29034 98 aa7.45□□□□□ -1.22
CNOT3-205ENST00000457463 LBHQ53QV2 105 aaPredicted RBP7.45□□□□□ -1.22
CNOT3-205ENST00000457463 ANKRD39Q53RE8 183 aa7.45□□□□□ -1.22
CNOT3-205ENST00000457463 A0A0J9YXY3 114 aa7.44□□□□□ -1.22
CNOT3-205ENST00000457463 C5orf52A6NGY3 159 aa7.44□□□□□ -1.22
CNOT3-205ENST00000457463 NMUP48645 174 aa7.44□□□□□ -1.22
CNOT3-205ENST00000457463 ADAMTSL4-AS1Q5T5F5 129 aa7.44□□□□□ -1.22
CNOT3-205ENST00000457463 SPINK6Q6UWN8 80 aa7.44□□□□□ -1.22
CNOT3-205ENST00000457463 NKAPP1Q8N9T2 125 aa7.44□□□□□ -1.22
CNOT3-205ENST00000457463 IGKV2-28A0A075B6P5 120 aa7.43□□□□□ -1.22
CNOT3-205ENST00000457463 C20orf202A1L168 122 aa7.43□□□□□ -1.22
CNOT3-205ENST00000457463 IGKV2D-28P01615 120 aa7.43□□□□□ -1.22
CNOT3-205ENST00000457463 BOD1L2Q8IYS8 172 aa7.43□□□□□ -1.22
CNOT3-205ENST00000457463 J3QL48 77 aa7.42□□□□□ -1.22
CNOT3-205ENST00000457463 EIF4EBP3O60516 100 aaPredicted RBP7.42□□□□□ -1.22
CNOT3-205ENST00000457463 NPC2P61916 151 aa7.42□□□□□ -1.22
CNOT3-205ENST00000457463 RPL24P83731 157 aaKnown RBP7.42□□□□□ -1.22
CNOT3-205ENST00000457463 IGLV1-50A0A075B6I6 118 aa7.41□□□□□ -1.22
CNOT3-205ENST00000457463 LINC00587B1AMM8 73 aa7.41□□□□□ -1.22
CNOT3-205ENST00000457463 OXTP01178 125 aa7.41□□□□□ -1.22
CNOT3-205ENST00000457463 MT1HL1P0DM35 61 aa7.41□□□□□ -1.22
CNOT3-205ENST00000457463 SOSTDC1Q6X4U4 206 aa7.41□□□□□ -1.22
CNOT3-205ENST00000457463 LITAFQ99732 161 aa7.41□□□□□ -1.22
CNOT3-205ENST00000457463 DMBT1Q9UGM3 2413 aaPredicted RBP7.4□□□□□ -1.22
CNOT3-205ENST00000457463 ZNF815PA8K554 130 aa7.4□□□□□ -1.22
CNOT3-205ENST00000457463 TMEM238C9JI98 176 aa7.4□□□□□ -1.22
CNOT3-205ENST00000457463 NCR3O14931 201 aa7.4□□□□□ -1.22
CNOT3-205ENST00000457463 PCP2Q8IVA1 136 aa7.39□□□□□ -1.23
CNOT3-205ENST00000457463 HMCN2Q8NDA2 5059 aa7.39□□□□□ -1.23
CNOT3-205ENST00000457463 LOC107984156A0A0G2JMH3 177 aa7.38□□□□□ -1.23
CNOT3-205ENST00000457463 ZNF861PO60384 105 aa7.38□□□□□ -1.23
CNOT3-205ENST00000457463 BCE1O60756 84 aa7.38□□□□□ -1.23
CNOT3-205ENST00000457463 ARL17AQ8IVW1 177 aa7.38□□□□□ -1.23
CNOT3-205ENST00000457463 H0Y9J4 135 aa7.37□□□□□ -1.23
CNOT3-205ENST00000457463 M0R378 163 aa7.37□□□□□ -1.23
CNOT3-205ENST00000457463 LINC01600Q96MT4 127 aa7.37□□□□□ -1.23
CNOT3-205ENST00000457463 PRLHP81277 87 aa7.36□□□□□ -1.23
CNOT3-205ENST00000457463 KRTAP13-1Q8IUC0 172 aa7.36□□□□□ -1.23
CNOT3-205ENST00000457463 DIRC1Q969H9 104 aa7.36□□□□□ -1.23
CNOT3-205ENST00000457463 TMEM126AQ9H061 195 aa7.36□□□□□ -1.23
CNOT3-205ENST00000457463 TRBV10-3A0A0K0K1G6 114 aa7.35□□□□□ -1.23
CNOT3-205ENST00000457463 SCGB1D1O95968 90 aa7.35□□□□□ -1.23
CNOT3-205ENST00000457463 KRTAP1-4P0C5Y4 121 aa7.35□□□□□ -1.23
CNOT3-205ENST00000457463 REG3GQ6UW15 175 aa7.35□□□□□ -1.23
CNOT3-205ENST00000457463 TIMM17BO60830 172 aa7.34□□□□□ -1.23
CNOT3-205ENST00000457463 LINC00308Q8TCZ7 52 aa7.34□□□□□ -1.23
CNOT3-205ENST00000457463 MIEN1Q9BRT3 115 aa7.34□□□□□ -1.23
CNOT3-205ENST00000457463 KRTAP10-8P60410 259 aa7.33□□□□□ -1.24
CNOT3-205ENST00000457463 SCGB1D4Q6XE38 83 aa7.33□□□□□ -1.24
CNOT3-205ENST00000457463 FAM19A1Q7Z5A9 133 aa7.33□□□□□ -1.24
CNOT3-205ENST00000457463 TMA7Q9Y2S6 64 aaKnown RBP7.33□□□□□ -1.24
CNOT3-205ENST00000457463 RPL28P46779 137 aaKnown RBP7.32□□□□□ -1.24
CNOT3-205ENST00000457463 UBE2AP49459 152 aa7.32□□□□□ -1.24
CNOT3-205ENST00000457463 AKR1D1P51857 326 aa7.32□□□□□ -1.24
CNOT3-205ENST00000457463 PRR26Q8N8Z3 221 aa7.32□□□□□ -1.24
CNOT3-205ENST00000457463 NDUFC2O95298 119 aa7.31□□□□□ -1.24
CNOT3-205ENST00000457463 DDTP30046 118 aa7.31□□□□□ -1.24
CNOT3-205ENST00000457463 SPANXB1Q9NS25 103 aaPredicted RBP7.31□□□□□ -1.24
CNOT3-205ENST00000457463 TRBV10-2A0A0K0K1G8 114 aa7.3□□□□□ -1.24
CNOT3-205ENST00000457463 HSBP1L1C9JCN9 74 aa7.3□□□□□ -1.24
CNOT3-205ENST00000457463 KRTAP4-16G5E9R7 235 aaPredicted RBP7.3□□□□□ -1.24
CNOT3-205ENST00000457463 PRYO14603 147 aa7.3□□□□□ -1.24
CNOT3-205ENST00000457463 SPRR1AP35321 89 aa7.3□□□□□ -1.24
CNOT3-205ENST00000457463 SPANXDQ9BXN6 97 aa7.3□□□□□ -1.24
CNOT3-205ENST00000457463 KCNQ1DNQ9H478 68 aa7.3□□□□□ -1.24
CNOT3-205ENST00000457463 SPANXCQ9NY87 97 aa7.3□□□□□ -1.24
CNOT3-205ENST00000457463 ANAPC11Q9NYG5 84 aa7.3□□□□□ -1.24
CNOT3-205ENST00000457463 IGLV6-57P01721 117 aa7.29□□□□□ -1.24
CNOT3-205ENST00000457463 MUSTN1Q8IVN3 82 aa7.28□□□□□ -1.24
CNOT3-205ENST00000457463 JOSD1Q15040 202 aaPredicted RBP7.27□□□□□ -1.25
CNOT3-205ENST00000457463 S100A7L2Q5SY68 101 aa7.27□□□□□ -1.25
CNOT3-205ENST00000457463 HIGD2AQ9BW72 106 aa7.27□□□□□ -1.25
CNOT3-205ENST00000457463 A0A087X002 238 aa7.26□□□□□ -1.25
CNOT3-205ENST00000457463 LINC00337Q8N6G1 96 aa7.26□□□□□ -1.25
CNOT3-205ENST00000457463 B5MCH6 92 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms