RNA–Protein interactions for RNA: ENST00000456991.5

TMEM56-203, Transcript of transmembrane protein 56, humanhuman

TSL 3

Gene TMEM56, Length 992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-203ENST00000456991 COX7B2Q8TF08 81 aa12.64□□□□□ -0.39
TMEM56-203ENST00000456991 BCE1O60756 84 aa12.63□□□□□ -0.39
TMEM56-203ENST00000456991 TMEM170BQ5T4T1 132 aa12.63□□□□□ -0.39
TMEM56-203ENST00000456991 MRPL55Q7Z7F7 128 aaKnown RBP12.63□□□□□ -0.39
TMEM56-203ENST00000456991 TRAV12-1A0A0B4J245 112 aa12.62□□□□□ -0.39
TMEM56-203ENST00000456991 F8VRH5 84 aa12.61□□□□□ -0.39
TMEM56-203ENST00000456991 HSPB8Q9UJY1 196 aa12.6□□□□□ -0.39
TMEM56-203ENST00000456991 FAT4Q6V0I7 4981 aa12.6□□□□□ -0.39
TMEM56-203ENST00000456991 IGLV5-39A0A0G2JS06 123 aa12.57□□□□□ -0.4
TMEM56-203ENST00000456991 LCE2AQ5TA79 106 aaPredicted RBP12.56□□□□□ -0.4
TMEM56-203ENST00000456991 LINC00167Q96N53 147 aa12.56□□□□□ -0.4
TMEM56-203ENST00000456991 PMCHL2Q9BQD1 86 aa12.56□□□□□ -0.4
TMEM56-203ENST00000456991 RPL37AP8A6NKH3 93 aa12.55□□□□□ -0.4
TMEM56-203ENST00000456991 CXCL5P42830 114 aa12.55□□□□□ -0.4
TMEM56-203ENST00000456991 ANAPC11Q9NYG5 84 aa12.55□□□□□ -0.4
TMEM56-203ENST00000456991 TMEM223A0PJW6 202 aa12.54□□□□□ -0.4
TMEM56-203ENST00000456991 MAP1LC3CQ9BXW4 147 aa12.53□□□□□ -0.4
TMEM56-203ENST00000456991 GAGE10A6NGK3 116 aa12.51□□□□□ -0.41
TMEM56-203ENST00000456991 UBE2AP49459 152 aa12.51□□□□□ -0.41
TMEM56-203ENST00000456991 KRTAP13-2Q52LG2 175 aa12.51□□□□□ -0.41
TMEM56-203ENST00000456991 ZNF625Q96I27 306 aaPredicted RBP12.51□□□□□ -0.41
TMEM56-203ENST00000456991 COA6Q5JTJ3 125 aaKnown RBP12.5□□□□□ -0.41
TMEM56-203ENST00000456991 FAM229BQ4G0N7 80 aa12.49□□□□□ -0.41
TMEM56-203ENST00000456991 LINC00304Q8N9R0 145 aa12.49□□□□□ -0.41
TMEM56-203ENST00000456991 RETNLBQ9BQ08 111 aa12.49□□□□□ -0.41
TMEM56-203ENST00000456991 DPM2O94777 84 aa12.48□□□□□ -0.41
TMEM56-203ENST00000456991 PFN2P35080 140 aa12.48□□□□□ -0.41
TMEM56-203ENST00000456991 KRTAP13-1Q8IUC0 172 aa12.48□□□□□ -0.41
TMEM56-203ENST00000456991 CDIP1Q9H305 208 aa12.48□□□□□ -0.41
TMEM56-203ENST00000456991 IGLV5-37A0A075B6J1 123 aa12.47□□□□□ -0.41
TMEM56-203ENST00000456991 SYS1-DBNDD2H3BUS1 97 aa12.47□□□□□ -0.41
TMEM56-203ENST00000456991 IGKCP01834 107 aa12.47□□□□□ -0.41
TMEM56-203ENST00000456991 NKAPP1Q8N9T2 125 aa12.47□□□□□ -0.41
TMEM56-203ENST00000456991 MUC17Q685J3 4493 aa12.47□□□□□ -0.41
TMEM56-203ENST00000456991 PLNP26678 52 aa12.46□□□□□ -0.41
TMEM56-203ENST00000456991 IGKV2D-26A0A0A0MRZ7 120 aa12.45□□□□□ -0.42
TMEM56-203ENST00000456991 TPRXLQ17RH7 258 aa12.45□□□□□ -0.42
TMEM56-203ENST00000456991 IGLV7-46A0A075B6I9 117 aa12.43□□□□□ -0.42
TMEM56-203ENST00000456991 C3orf79P0CE67 100 aa12.43□□□□□ -0.42
TMEM56-203ENST00000456991 CTAG1AP78358 180 aa12.43□□□□□ -0.42
TMEM56-203ENST00000456991 ERG28Q9UKR5 140 aa12.43□□□□□ -0.42
TMEM56-203ENST00000456991 A0A0U1RRA0 63 aa12.42□□□□□ -0.42
TMEM56-203ENST00000456991 KRTDAPP60985 99 aa12.42□□□□□ -0.42
TMEM56-203ENST00000456991 KRTAP9-6A0A140TA67 174 aa12.41□□□□□ -0.42
TMEM56-203ENST00000456991 TSPEAR-AS2P59090 65 aa12.41□□□□□ -0.42
TMEM56-203ENST00000456991 IGKV2-28A0A075B6P5 120 aa12.4□□□□□ -0.42
TMEM56-203ENST00000456991 LEPROTO15243 131 aa12.4□□□□□ -0.42
TMEM56-203ENST00000456991 IGKV2D-28P01615 120 aa12.4□□□□□ -0.42
TMEM56-203ENST00000456991 PET117Q6UWS5 81 aa12.4□□□□□ -0.42
TMEM56-203ENST00000456991 LINC00158P58513 81 aa12.39□□□□□ -0.43
TMEM56-203ENST00000456991 HERVK_113P61574 105 aa12.39□□□□□ -0.43
TMEM56-203ENST00000456991 LINC01545Q5VT33 79 aa12.39□□□□□ -0.43
TMEM56-203ENST00000456991 NDUFA12Q9UI09 145 aa12.39□□□□□ -0.43
TMEM56-203ENST00000456991 SFTA2Q6UW10 78 aa12.37□□□□□ -0.43
TMEM56-203ENST00000456991 PLEKHB2Q96CS7 222 aa12.37□□□□□ -0.43
TMEM56-203ENST00000456991 J3QQQ9 107 aa12.36□□□□□ -0.43
TMEM56-203ENST00000456991 SMIM13P0DJ93 91 aa12.36□□□□□ -0.43
TMEM56-203ENST00000456991 PRLHP81277 87 aa12.36□□□□□ -0.43
TMEM56-203ENST00000456991 COX17Q14061 63 aa12.36□□□□□ -0.43
TMEM56-203ENST00000456991 HIST3H2BBQ8N257 126 aa12.36□□□□□ -0.43
TMEM56-203ENST00000456991 SND1-IT1Q9HBX3 110 aa12.36□□□□□ -0.43
TMEM56-203ENST00000456991 S100A6P06703 90 aa12.35□□□□□ -0.43
TMEM56-203ENST00000456991 MEIG1Q5JSS6 88 aa12.35□□□□□ -0.43
TMEM56-203ENST00000456991 FAM19A1Q7Z5A9 133 aa12.35□□□□□ -0.43
TMEM56-203ENST00000456991 MYMXA0A1B0GTQ4 84 aa12.34□□□□□ -0.43
TMEM56-203ENST00000456991 PPDPFQ9H3Y8 114 aa12.34□□□□□ -0.43
TMEM56-203ENST00000456991 LGALS3P17931 250 aaKnown RBP12.33□□□□□ -0.44
TMEM56-203ENST00000456991 S100A2P29034 98 aa12.33□□□□□ -0.44
TMEM56-203ENST00000456991 TMEM126AQ9H061 195 aa12.33□□□□□ -0.44
TMEM56-203ENST00000456991 SNRPEP62304 92 aaKnown RBP12.32□□□□□ -0.44
TMEM56-203ENST00000456991 HERV-K104P63124 156 aa12.32□□□□□ -0.44
TMEM56-203ENST00000456991 TMEM238C9JI98 176 aa12.31□□□□□ -0.44
TMEM56-203ENST00000456991 E9PLD3 99 aa12.31□□□□□ -0.44
TMEM56-203ENST00000456991 RPL24P83731 157 aaKnown RBP12.31□□□□□ -0.44
TMEM56-203ENST00000456991 HIST1H2BLQ99880 126 aa12.31□□□□□ -0.44
TMEM56-203ENST00000456991 VPREB1P12018 145 aa12.3□□□□□ -0.44
TMEM56-203ENST00000456991 SPAG11AQ6PDA7 123 aa12.3□□□□□ -0.44
TMEM56-203ENST00000456991 ATOH7Q8N100 152 aa12.3□□□□□ -0.44
TMEM56-203ENST00000456991 M0R378 163 aa12.29□□□□□ -0.44
TMEM56-203ENST00000456991 C3orf22Q8N5N4 141 aa12.29□□□□□ -0.44
TMEM56-203ENST00000456991 MIR7-3HGQ8N6C7 128 aa12.29□□□□□ -0.44
TMEM56-203ENST00000456991 Q8NDZ9 215 aa12.29□□□□□ -0.44
TMEM56-203ENST00000456991 C20orf202A1L168 122 aa12.28□□□□□ -0.44
TMEM56-203ENST00000456991 DAND5Q8N907 189 aa12.27□□□□□ -0.45
TMEM56-203ENST00000456991 NMUP48645 174 aa12.26□□□□□ -0.45
TMEM56-203ENST00000456991 TTTY13Q9BZ97 58 aa12.25□□□□□ -0.45
TMEM56-203ENST00000456991 LINC00587B1AMM8 73 aa12.24□□□□□ -0.45
TMEM56-203ENST00000456991 FP248Q71RG6 208 aaPredicted RBP12.24□□□□□ -0.45
TMEM56-203ENST00000456991 LINC00337Q8N6G1 96 aa12.24□□□□□ -0.45
TMEM56-203ENST00000456991 HIGD2AQ9BW72 106 aa12.24□□□□□ -0.45
TMEM56-203ENST00000456991 A0A0J9YXY3 114 aa12.23□□□□□ -0.45
TMEM56-203ENST00000456991 C5orf52A6NGY3 159 aa12.23□□□□□ -0.45
TMEM56-203ENST00000456991 C4orf48Q5BLP8 95 aa12.23□□□□□ -0.45
TMEM56-203ENST00000456991 ANKRD39Q53RE8 183 aa12.22□□□□□ -0.45
TMEM56-203ENST00000456991 BOD1L2Q8IYS8 172 aa12.22□□□□□ -0.45
TMEM56-203ENST00000456991 ADAMTSL4-AS1Q5T5F5 129 aa12.2□□□□□ -0.46
TMEM56-203ENST00000456991 SPRR4Q96PI1 79 aa12.2□□□□□ -0.46
TMEM56-203ENST00000456991 ZNF815PA8K554 130 aa12.19□□□□□ -0.46
TMEM56-203ENST00000456991 NPC2P61916 151 aa12.19□□□□□ -0.46
TMEM56-203ENST00000456991 NCR3O14931 201 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms