RNA–Protein interactions for RNA: ENST00000453933.5

HMG20B-206, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-206ENST00000453933 COX17Q14061 63 aa12.37□□□□□ -0.43
HMG20B-206ENST00000453933 LINC00337Q8N6G1 96 aa12.36□□□□□ -0.43
HMG20B-206ENST00000453933 ZNF22P17026 224 aaPredicted RBP12.35□□□□□ -0.43
HMG20B-206ENST00000453933 KRTAP13-3Q3SY46 172 aa12.34□□□□□ -0.43
HMG20B-206ENST00000453933 Q8NDZ9 215 aa12.34□□□□□ -0.43
HMG20B-206ENST00000453933 S100PP25815 95 aa12.33□□□□□ -0.44
HMG20B-206ENST00000453933 C4orf48Q5BLP8 95 aa12.33□□□□□ -0.44
HMG20B-206ENST00000453933 FP248Q71RG6 208 aaPredicted RBP12.33□□□□□ -0.44
HMG20B-206ENST00000453933 SPRR4Q96PI1 79 aa12.32□□□□□ -0.44
HMG20B-206ENST00000453933 FABP9Q0Z7S8 132 aa12.3□□□□□ -0.44
HMG20B-206ENST00000453933 SFTA2Q6UW10 78 aa12.29□□□□□ -0.44
HMG20B-206ENST00000453933 ZNF706Q9Y5V0 76 aaPredicted RBP12.29□□□□□ -0.44
HMG20B-206ENST00000453933 COX19Q49B96 90 aa12.28□□□□□ -0.44
HMG20B-206ENST00000453933 LINC00158P58513 81 aa12.27□□□□□ -0.45
HMG20B-206ENST00000453933 TMEM170BQ5T4T1 132 aa12.27□□□□□ -0.45
HMG20B-206ENST00000453933 UQCC3Q6UW78 93 aa12.27□□□□□ -0.45
HMG20B-206ENST00000453933 COMMD7Q86VX2 200 aa12.27□□□□□ -0.45
HMG20B-206ENST00000453933 A0A096LNJ9 63 aa12.26□□□□□ -0.45
HMG20B-206ENST00000453933 SEC61BP60468 96 aaKnown RBP12.26□□□□□ -0.45
HMG20B-206ENST00000453933 DAND5Q8N907 189 aa12.26□□□□□ -0.45
HMG20B-206ENST00000453933 TMEM218A2RU14 115 aa12.25□□□□□ -0.45
HMG20B-206ENST00000453933 Q8NBF4 154 aa12.25□□□□□ -0.45
HMG20B-206ENST00000453933 A0A0U1RRA0 63 aa12.24□□□□□ -0.45
HMG20B-206ENST00000453933 C11orf86A6NJI1 115 aa12.24□□□□□ -0.45
HMG20B-206ENST00000453933 BAGE3Q86Y29 109 aa12.24□□□□□ -0.45
HMG20B-206ENST00000453933 HBDP02042 147 aa12.22□□□□□ -0.45
HMG20B-206ENST00000453933 LINC00614P0C842 121 aa12.22□□□□□ -0.45
HMG20B-206ENST00000453933 LCE2CQ5TA81 110 aa12.22□□□□□ -0.45
HMG20B-206ENST00000453933 PMCHL1Q16048 86 aa12.21□□□□□ -0.45
HMG20B-206ENST00000453933 NDUFA5Q16718 116 aa12.21□□□□□ -0.45
HMG20B-206ENST00000453933 PRYO14603 147 aa12.2□□□□□ -0.46
HMG20B-206ENST00000453933 URB1-AS1Q96HZ7 61 aa12.2□□□□□ -0.46
HMG20B-206ENST00000453933 SEC11CQ9BY50 192 aa12.2□□□□□ -0.46
HMG20B-206ENST00000453933 ATP6V1G1O75348 118 aa12.19□□□□□ -0.46
HMG20B-206ENST00000453933 SPINK1P00995 79 aa12.19□□□□□ -0.46
HMG20B-206ENST00000453933 SMCR5Q8TEV8 140 aa12.19□□□□□ -0.46
HMG20B-206ENST00000453933 C18orf32Q8TCD1 76 aa12.18□□□□□ -0.46
HMG20B-206ENST00000453933 BOD1L2Q8IYS8 172 aa12.17□□□□□ -0.46
HMG20B-206ENST00000453933 ETDCA0A1B0GVM5 59 aa12.16□□□□□ -0.46
HMG20B-206ENST00000453933 NCR3O14931 201 aa12.16□□□□□ -0.46
HMG20B-206ENST00000453933 CHTOPQ9Y3Y2 248 aaKnown RBP12.16□□□□□ -0.46
HMG20B-206ENST00000453933 SMIM13P0DJ93 91 aa12.15□□□□□ -0.46
HMG20B-206ENST00000453933 SPRR1AP35321 89 aa12.15□□□□□ -0.46
HMG20B-206ENST00000453933 KCNQ1DNQ9H478 68 aa12.15□□□□□ -0.46
HMG20B-206ENST00000453933 MEIG1Q5JSS6 88 aa12.14□□□□□ -0.47
HMG20B-206ENST00000453933 NDUFA12Q9UI09 145 aa12.14□□□□□ -0.47
HMG20B-206ENST00000453933 TRAPPC1Q9Y5R8 145 aa12.14□□□□□ -0.47
HMG20B-206ENST00000453933 TMEM223A0PJW6 202 aa12.13□□□□□ -0.47
HMG20B-206ENST00000453933 GAGE2AQ6NT46 116 aa12.13□□□□□ -0.47
HMG20B-206ENST00000453933 RPS10P5Q9NQ39 176 aa12.13□□□□□ -0.47
HMG20B-206ENST00000453933 KRTAP4-16G5E9R7 235 aaPredicted RBP12.11□□□□□ -0.47
HMG20B-206ENST00000453933 LINC00483Q53H64 154 aa12.11□□□□□ -0.47
HMG20B-206ENST00000453933 MIR7-3HGQ8N6C7 128 aa12.11□□□□□ -0.47
HMG20B-206ENST00000453933 IGLV9-49A0A0B4J1Y8 123 aa12.1□□□□□ -0.47
HMG20B-206ENST00000453933 S100A12P80511 92 aa12.1□□□□□ -0.47
HMG20B-206ENST00000453933 MOBPQ13875 183 aa12.1□□□□□ -0.47
HMG20B-206ENST00000453933 KRTAP19-2Q3LHN2 52 aa12.1□□□□□ -0.47
HMG20B-206ENST00000453933 TRBV10-3A0A0K0K1G6 114 aa12.09□□□□□ -0.47
HMG20B-206ENST00000453933 MT1HP80294 61 aa12.09□□□□□ -0.47
HMG20B-206ENST00000453933 RHEBQ15382 184 aa12.09□□□□□ -0.47
HMG20B-206ENST00000453933 SLC7A5P1Q8MH63 180 aa12.09□□□□□ -0.47
HMG20B-206ENST00000453933 FAM19A2Q8N3H0 131 aa12.09□□□□□ -0.47
HMG20B-206ENST00000453933 C10orf91Q5T1B1 145 aa12.08□□□□□ -0.48
HMG20B-206ENST00000453933 XP32Q5T750 250 aa12.08□□□□□ -0.48
HMG20B-206ENST00000453933 RPS29P62273 56 aaKnown RBP12.07□□□□□ -0.48
HMG20B-206ENST00000453933 HERV-K104P63124 156 aa12.07□□□□□ -0.48
HMG20B-206ENST00000453933 SSBP3-AS1Q7Z2R9 100 aa12.07□□□□□ -0.48
HMG20B-206ENST00000453933 Q8N377 158 aa12.07□□□□□ -0.48
HMG20B-206ENST00000453933 LINC00587B1AMM8 73 aa12.06□□□□□ -0.48
HMG20B-206ENST00000453933 TRAV12-1A0A0B4J245 112 aa12.05□□□□□ -0.48
HMG20B-206ENST00000453933 B5MCH6 92 aa12.04□□□□□ -0.48
HMG20B-206ENST00000453933 SLC25A20O43772 301 aa12.04□□□□□ -0.48
HMG20B-206ENST00000453933 ERC2-IT1O76042 136 aa12.04□□□□□ -0.48
HMG20B-206ENST00000453933 IFI27L1Q96BM0 104 aa12.04□□□□□ -0.48
HMG20B-206ENST00000453933 MAP1LC3CQ9BXW4 147 aa12.04□□□□□ -0.48
HMG20B-206ENST00000453933 SVBPQ8N300 66 aa12.02□□□□□ -0.49
HMG20B-206ENST00000453933 APOC3P02656 99 aa12.01□□□□□ -0.49
HMG20B-206ENST00000453933 CFC1BP0CG36 223 aa12.01□□□□□ -0.49
HMG20B-206ENST00000453933 MYMXA0A1B0GTQ4 84 aa12□□□□□ -0.49
HMG20B-206ENST00000453933 DDTP30046 118 aa12□□□□□ -0.49
HMG20B-206ENST00000453933 SNAPINO95295 136 aa11.99□□□□□ -0.49
HMG20B-206ENST00000453933 LORP23490 312 aaPredicted RBP11.98□□□□□ -0.49
HMG20B-206ENST00000453933 CHCHD1Q96BP2 118 aaKnown RBP11.98□□□□□ -0.49
HMG20B-206ENST00000453933 Q9BRP9 147 aa11.98□□□□□ -0.49
HMG20B-206ENST00000453933 Q6ZRX8 168 aa11.97□□□□□ -0.49
HMG20B-206ENST00000453933 TRBV10-2A0A0K0K1G8 114 aa11.96□□□□□ -0.49
HMG20B-206ENST00000453933 C9orf153Q5TBE3 101 aa11.96□□□□□ -0.49
HMG20B-206ENST00000453933 KRTAP10-6P60371 365 aaPredicted RBP11.95□□□□□ -0.5
HMG20B-206ENST00000453933 LOC107984156A0A0G2JMH3 177 aa11.93□□□□□ -0.5
HMG20B-206ENST00000453933 ARL17AQ8IVW1 177 aa11.93□□□□□ -0.5
HMG20B-206ENST00000453933 H0Y8G0 127 aa11.92□□□□□ -0.5
HMG20B-206ENST00000453933 S100A7L2Q5SY68 101 aa11.92□□□□□ -0.5
HMG20B-206ENST00000453933 MIEN1Q9BRT3 115 aa11.92□□□□□ -0.5
HMG20B-206ENST00000453933 SPANXB1Q9NS25 103 aaPredicted RBP11.92□□□□□ -0.5
HMG20B-206ENST00000453933 JOSD1Q15040 202 aaPredicted RBP11.91□□□□□ -0.5
HMG20B-206ENST00000453933 PCOTHQ58A44 107 aa11.91□□□□□ -0.5
HMG20B-206ENST00000453933 S100A1P23297 94 aa11.9□□□□□ -0.5
HMG20B-206ENST00000453933 TSPEAR-AS2P59090 65 aa11.9□□□□□ -0.5
HMG20B-206ENST00000453933 IGLV8-61A0A075B6I0 122 aa11.89□□□□□ -0.51
HMG20B-206ENST00000453933 LEPROTO15243 131 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms