RNA–Protein interactions for RNA: ENST00000451506.5

PTPRN-209, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-209ENST00000451506 SCO1O75880 301 aa9.83□□□□□ -0.84
PTPRN-209ENST00000451506 SLC7A5P1Q8MH63 180 aa9.83□□□□□ -0.84
PTPRN-209ENST00000451506 IGKV2-28A0A075B6P5 120 aa9.82□□□□□ -0.84
PTPRN-209ENST00000451506 IGKV2D-28P01615 120 aa9.82□□□□□ -0.84
PTPRN-209ENST00000451506 ZNF22P17026 224 aaPredicted RBP9.82□□□□□ -0.84
PTPRN-209ENST00000451506 BAGE3Q86Y29 109 aa9.82□□□□□ -0.84
PTPRN-209ENST00000451506 PRLHP81277 87 aa9.81□□□□□ -0.84
PTPRN-209ENST00000451506 IFI27L1Q96BM0 104 aa9.81□□□□□ -0.84
PTPRN-209ENST00000451506 TRAV12-1A0A0B4J245 112 aa9.8□□□□□ -0.84
PTPRN-209ENST00000451506 TRGC2P03986 189 aa9.8□□□□□ -0.84
PTPRN-209ENST00000451506 C11orf86A6NJI1 115 aa9.79□□□□□ -0.84
PTPRN-209ENST00000451506 PPDPFQ9H3Y8 114 aa9.79□□□□□ -0.84
PTPRN-209ENST00000451506 CHTOPQ9Y3Y2 248 aaKnown RBP9.79□□□□□ -0.84
PTPRN-209ENST00000451506 TMEM170BQ5T4T1 132 aa9.78□□□□□ -0.84
PTPRN-209ENST00000451506 TMEM126AQ9H061 195 aa9.78□□□□□ -0.84
PTPRN-209ENST00000451506 TMEM238C9JI98 176 aa9.77□□□□□ -0.85
PTPRN-209ENST00000451506 FAM19A1Q7Z5A9 133 aa9.77□□□□□ -0.85
PTPRN-209ENST00000451506 C3orf22Q8N5N4 141 aa9.77□□□□□ -0.85
PTPRN-209ENST00000451506 PLEKHB2Q96CS7 222 aa9.77□□□□□ -0.85
PTPRN-209ENST00000451506 VPREB1P12018 145 aa9.76□□□□□ -0.85
PTPRN-209ENST00000451506 M0R378 163 aa9.75□□□□□ -0.85
PTPRN-209ENST00000451506 COX17Q14061 63 aa9.75□□□□□ -0.85
PTPRN-209ENST00000451506 COLCA2A8K830 154 aa9.74□□□□□ -0.85
PTPRN-209ENST00000451506 SERF1AO75920 110 aa9.74□□□□□ -0.85
PTPRN-209ENST00000451506 PFN2P35080 140 aa9.74□□□□□ -0.85
PTPRN-209ENST00000451506 SND1-IT1Q9HBX3 110 aa9.74□□□□□ -0.85
PTPRN-209ENST00000451506 LEPROTL1O95214 131 aa9.73□□□□□ -0.85
PTPRN-209ENST00000451506 FAM19A2Q8N3H0 131 aa9.73□□□□□ -0.85
PTPRN-209ENST00000451506 HSPB8Q9UJY1 196 aa9.73□□□□□ -0.85
PTPRN-209ENST00000451506 ERG28Q9UKR5 140 aa9.73□□□□□ -0.85
PTPRN-209ENST00000451506 SPAG11AQ6PDA7 123 aa9.72□□□□□ -0.85
PTPRN-209ENST00000451506 Q8NDZ9 215 aa9.72□□□□□ -0.85
PTPRN-209ENST00000451506 TMEM223A0PJW6 202 aa9.71□□□□□ -0.86
PTPRN-209ENST00000451506 FP248Q71RG6 208 aaPredicted RBP9.71□□□□□ -0.86
PTPRN-209ENST00000451506 ZNF625Q96I27 306 aaPredicted RBP9.71□□□□□ -0.86
PTPRN-209ENST00000451506 PLNP26678 52 aa9.7□□□□□ -0.86
PTPRN-209ENST00000451506 LINC00310P59036 64 aa9.7□□□□□ -0.86
PTPRN-209ENST00000451506 RPL24P83731 157 aaKnown RBP9.7□□□□□ -0.86
PTPRN-209ENST00000451506 KRTAP13-3Q3SY46 172 aa9.69□□□□□ -0.86
PTPRN-209ENST00000451506 ASB16-AS1Q495Z4 193 aa9.68□□□□□ -0.86
PTPRN-209ENST00000451506 SPRR4Q96PI1 79 aa9.68□□□□□ -0.86
PTPRN-209ENST00000451506 HIGD2AQ9BW72 106 aa9.68□□□□□ -0.86
PTPRN-209ENST00000451506 H0Y8G0 127 aa9.67□□□□□ -0.86
PTPRN-209ENST00000451506 HERV-K104P63124 156 aa9.66□□□□□ -0.86
PTPRN-209ENST00000451506 LINC00337Q8N6G1 96 aa9.66□□□□□ -0.86
PTPRN-209ENST00000451506 LINC00587B1AMM8 73 aa9.65□□□□□ -0.86
PTPRN-209ENST00000451506 LCE2DQ5TA82 110 aaPredicted RBP9.65□□□□□ -0.86
PTPRN-209ENST00000451506 KRTAP4-1Q9BYQ7 146 aa9.65□□□□□ -0.86
PTPRN-209ENST00000451506 DPM2O94777 84 aa9.64□□□□□ -0.87
PTPRN-209ENST00000451506 LINC01547P58512 204 aaPredicted RBP9.64□□□□□ -0.87
PTPRN-209ENST00000451506 HERVK_113P61574 105 aa9.64□□□□□ -0.87
PTPRN-209ENST00000451506 MAP1LC3CQ9BXW4 147 aa9.64□□□□□ -0.87
PTPRN-209ENST00000451506 FABP4P15090 132 aa9.63□□□□□ -0.87
PTPRN-209ENST00000451506 C4orf48Q5BLP8 95 aa9.63□□□□□ -0.87
PTPRN-209ENST00000451506 MYMXA0A1B0GTQ4 84 aa9.62□□□□□ -0.87
PTPRN-209ENST00000451506 HIST1H2BKO60814 126 aa9.62□□□□□ -0.87
PTPRN-209ENST00000451506 HIST1H2BJP06899 126 aa9.62□□□□□ -0.87
PTPRN-209ENST00000451506 HIST1H2BOP23527 126 aa9.62□□□□□ -0.87
PTPRN-209ENST00000451506 HIST1H2BBP33778 126 aa9.62□□□□□ -0.87
PTPRN-209ENST00000451506 LINC00158P58513 81 aa9.62□□□□□ -0.87
PTPRN-209ENST00000451506 HIST1H2BDP58876 126 aa9.62□□□□□ -0.87
PTPRN-209ENST00000451506 HIST1H2BCP62807 126 aa9.62□□□□□ -0.87
PTPRN-209ENST00000451506 HIST2H2BEQ16778 126 aa9.62□□□□□ -0.87
PTPRN-209ENST00000451506 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.62□□□□□ -0.87
PTPRN-209ENST00000451506 DAND5Q8N907 189 aa9.62□□□□□ -0.87
PTPRN-209ENST00000451506 Q8NBF4 154 aa9.62□□□□□ -0.87
PTPRN-209ENST00000451506 HIST1H2BHQ93079 126 aa9.62□□□□□ -0.87
PTPRN-209ENST00000451506 HIST1H2BNQ99877 126 aa9.62□□□□□ -0.87
PTPRN-209ENST00000451506 HIST1H2BMQ99879 126 aa9.62□□□□□ -0.87
PTPRN-209ENST00000451506 NDUFA12Q9UI09 145 aa9.62□□□□□ -0.87
PTPRN-209ENST00000451506 ATP6V1G1O75348 118 aa9.61□□□□□ -0.87
PTPRN-209ENST00000451506 MEIG1Q5JSS6 88 aa9.61□□□□□ -0.87
PTPRN-209ENST00000451506 ZNF706Q9Y5V0 76 aaPredicted RBP9.61□□□□□ -0.87
PTPRN-209ENST00000451506 LEPROTO15243 131 aa9.6□□□□□ -0.87
PTPRN-209ENST00000451506 IGKCP01834 107 aa9.6□□□□□ -0.87
PTPRN-209ENST00000451506 NMUP48645 174 aa9.6□□□□□ -0.87
PTPRN-209ENST00000451506 FSIP2Q5CZC0 6907 aa9.59□□□□□ -0.87
PTPRN-209ENST00000451506 SPINK1P00995 79 aa9.58□□□□□ -0.88
PTPRN-209ENST00000451506 SEC61BP60468 96 aaKnown RBP9.58□□□□□ -0.88
PTPRN-209ENST00000451506 J3QQQ9 107 aa9.57□□□□□ -0.88
PTPRN-209ENST00000451506 SMIM13P0DJ93 91 aa9.57□□□□□ -0.88
PTPRN-209ENST00000451506 LGALS3P17931 250 aaKnown RBP9.56□□□□□ -0.88
PTPRN-209ENST00000451506 SPRR1AP35321 89 aa9.56□□□□□ -0.88
PTPRN-209ENST00000451506 A0A0U1RRA0 63 aa9.55□□□□□ -0.88
PTPRN-209ENST00000451506 SYS1-DBNDD2H3BUS1 97 aa9.55□□□□□ -0.88
PTPRN-209ENST00000451506 PRYO14603 147 aa9.55□□□□□ -0.88
PTPRN-209ENST00000451506 TSPEAR-AS2P59090 65 aa9.55□□□□□ -0.88
PTPRN-209ENST00000451506 MIR7-3HGQ8N6C7 128 aa9.55□□□□□ -0.88
PTPRN-209ENST00000451506 SMCR5Q8TEV8 140 aa9.55□□□□□ -0.88
PTPRN-209ENST00000451506 PMCHL2Q9BQD1 86 aa9.55□□□□□ -0.88
PTPRN-209ENST00000451506 CRCT1Q9UGL9 99 aa9.55□□□□□ -0.88
PTPRN-209ENST00000451506 KRTAP4-16G5E9R7 235 aaPredicted RBP9.54□□□□□ -0.88
PTPRN-209ENST00000451506 LINC00483Q53H64 154 aa9.54□□□□□ -0.88
PTPRN-209ENST00000451506 COA6Q5JTJ3 125 aaKnown RBP9.54□□□□□ -0.88
PTPRN-209ENST00000451506 BOD1L2Q8IYS8 172 aa9.53□□□□□ -0.88
PTPRN-209ENST00000451506 KCNQ1DNQ9H478 68 aa9.53□□□□□ -0.88
PTPRN-209ENST00000451506 LINC01545Q5VT33 79 aa9.52□□□□□ -0.89
PTPRN-209ENST00000451506 PET117Q6UWS5 81 aa9.52□□□□□ -0.89
PTPRN-209ENST00000451506 E9PLD3 99 aa9.51□□□□□ -0.89
PTPRN-209ENST00000451506 Q8N377 158 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms