RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 RNF213Q63HN8 5207 aa5.78□□□□□ -1.48
USP54-207ENST00000451492 LPAP08519 4548 aa5.77□□□□□ -1.49
USP54-207ENST00000451492 LEPROTL1O95214 131 aa5.77□□□□□ -1.49
USP54-207ENST00000451492 SMIM13P0DJ93 91 aa5.77□□□□□ -1.49
USP54-207ENST00000451492 FABP4P15090 132 aa5.77□□□□□ -1.49
USP54-207ENST00000451492 RPL13AP40429 203 aaKnown RBP5.77□□□□□ -1.49
USP54-207ENST00000451492 LINC00310P59036 64 aa5.77□□□□□ -1.49
USP54-207ENST00000451492 COX17Q14061 63 aa5.77□□□□□ -1.49
USP54-207ENST00000451492 FAM19A1Q7Z5A9 133 aa5.77□□□□□ -1.49
USP54-207ENST00000451492 ANAPC11Q9NYG5 84 aa5.77□□□□□ -1.49
USP54-207ENST00000451492 A0A087X002 238 aa5.76□□□□□ -1.49
USP54-207ENST00000451492 ATP6V1G1O75348 118 aa5.76□□□□□ -1.49
USP54-207ENST00000451492 RPL24P83731 157 aaKnown RBP5.76□□□□□ -1.49
USP54-207ENST00000451492 SFTA2Q6UW10 78 aa5.76□□□□□ -1.49
USP54-207ENST00000451492 PMCHL2Q9BQD1 86 aa5.76□□□□□ -1.49
USP54-207ENST00000451492 TMEM126AQ9H061 195 aa5.76□□□□□ -1.49
USP54-207ENST00000451492 NCR3O14931 201 aa5.75□□□□□ -1.49
USP54-207ENST00000451492 TSPAN13O95857 204 aa5.75□□□□□ -1.49
USP54-207ENST00000451492 TSPEAR-AS2P59090 65 aa5.74□□□□□ -1.49
USP54-207ENST00000451492 PRR4Q16378 134 aa5.74□□□□□ -1.49
USP54-207ENST00000451492 MIR7-3HGQ8N6C7 128 aa5.74□□□□□ -1.49
USP54-207ENST00000451492 TYMSOSQ8TAI1 123 aa5.74□□□□□ -1.49
USP54-207ENST00000451492 NDUFA12Q9UI09 145 aa5.74□□□□□ -1.49
USP54-207ENST00000451492 M0R378 163 aa5.73□□□□□ -1.49
USP54-207ENST00000451492 CRYGAP11844 174 aa5.73□□□□□ -1.49
USP54-207ENST00000451492 KRTAP13-1Q8IUC0 172 aa5.73□□□□□ -1.49
USP54-207ENST00000451492 MYMXA0A1B0GTQ4 84 aa5.72□□□□□ -1.49
USP54-207ENST00000451492 COLCA2A8K830 154 aa5.72□□□□□ -1.49
USP54-207ENST00000451492 BOD1L2Q8IYS8 172 aa5.72□□□□□ -1.49
USP54-207ENST00000451492 DAND5Q8N907 189 aa5.72□□□□□ -1.49
USP54-207ENST00000451492 HIGD2AQ9BW72 106 aa5.72□□□□□ -1.49
USP54-207ENST00000451492 HSPB8Q9UJY1 196 aa5.72□□□□□ -1.49
USP54-207ENST00000451492 LEPROTO15243 131 aa5.71□□□□□ -1.5
USP54-207ENST00000451492 IGKCP01834 107 aa5.71□□□□□ -1.5
USP54-207ENST00000451492 PLNP26678 52 aa5.71□□□□□ -1.5
USP54-207ENST00000451492 HERV-K104P63124 156 aa5.71□□□□□ -1.5
USP54-207ENST00000451492 KRTAP13-2Q52LG2 175 aa5.71□□□□□ -1.5
USP54-207ENST00000451492 DPM2O94777 84 aa5.7□□□□□ -1.5
USP54-207ENST00000451492 HERVK_113P61574 105 aa5.7□□□□□ -1.5
USP54-207ENST00000451492 J3QQQ9 107 aa5.69□□□□□ -1.5
USP54-207ENST00000451492 LGALS3P17931 250 aaKnown RBP5.69□□□□□ -1.5
USP54-207ENST00000451492 NPC2P61916 151 aa5.69□□□□□ -1.5
USP54-207ENST00000451492 PLEKHB2Q96CS7 222 aa5.69□□□□□ -1.5
USP54-207ENST00000451492 MAP1LC3CQ9BXW4 147 aa5.69□□□□□ -1.5
USP54-207ENST00000451492 IGKV2D-26A0A0A0MRZ7 120 aa5.68□□□□□ -1.5
USP54-207ENST00000451492 PRYO14603 147 aa5.68□□□□□ -1.5
USP54-207ENST00000451492 TRBV10-3A0A0K0K1G6 114 aa5.67□□□□□ -1.5
USP54-207ENST00000451492 ETDCA0A1B0GVM5 59 aa5.67□□□□□ -1.5
USP54-207ENST00000451492 LINC00587B1AMM8 73 aa5.67□□□□□ -1.5
USP54-207ENST00000451492 C3orf22Q8N5N4 141 aa5.67□□□□□ -1.5
USP54-207ENST00000451492 RETNLBQ9BQ08 111 aa5.67□□□□□ -1.5
USP54-207ENST00000451492 MIEN1Q9BRT3 115 aa5.67□□□□□ -1.5
USP54-207ENST00000451492 HIST1H2BKO60814 126 aa5.66□□□□□ -1.5
USP54-207ENST00000451492 HIST1H2BJP06899 126 aa5.66□□□□□ -1.5
USP54-207ENST00000451492 HIST1H2BOP23527 126 aa5.66□□□□□ -1.5
USP54-207ENST00000451492 HIST1H2BBP33778 126 aa5.66□□□□□ -1.5
USP54-207ENST00000451492 HIST1H2BDP58876 126 aa5.66□□□□□ -1.5
USP54-207ENST00000451492 HIST1H2BCP62807 126 aa5.66□□□□□ -1.5
USP54-207ENST00000451492 HIST2H2BEQ16778 126 aa5.66□□□□□ -1.5
USP54-207ENST00000451492 FAM229BQ4G0N7 80 aa5.66□□□□□ -1.5
USP54-207ENST00000451492 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.66□□□□□ -1.5
USP54-207ENST00000451492 LINC00304Q8N9R0 145 aa5.66□□□□□ -1.5
USP54-207ENST00000451492 HIST1H2BHQ93079 126 aa5.66□□□□□ -1.5
USP54-207ENST00000451492 HIST1H2BNQ99877 126 aa5.66□□□□□ -1.5
USP54-207ENST00000451492 HIST1H2BMQ99879 126 aa5.66□□□□□ -1.5
USP54-207ENST00000451492 NMUP48645 174 aa5.65□□□□□ -1.5
USP54-207ENST00000451492 PPDPFQ9H3Y8 114 aa5.65□□□□□ -1.5
USP54-207ENST00000451492 SYS1-DBNDD2H3BUS1 97 aa5.64□□□□□ -1.51
USP54-207ENST00000451492 DDTP30046 118 aa5.64□□□□□ -1.51
USP54-207ENST00000451492 S100A12P80511 92 aa5.64□□□□□ -1.51
USP54-207ENST00000451492 SPRR4Q96PI1 79 aa5.64□□□□□ -1.51
USP54-207ENST00000451492 A0A0J9YXY3 114 aa5.63□□□□□ -1.51
USP54-207ENST00000451492 E9PLD3 99 aa5.63□□□□□ -1.51
USP54-207ENST00000451492 S100A7L2Q5SY68 101 aa5.63□□□□□ -1.51
USP54-207ENST00000451492 LINC00337Q8N6G1 96 aa5.63□□□□□ -1.51
USP54-207ENST00000451492 SMCR5Q8TEV8 140 aa5.63□□□□□ -1.51
USP54-207ENST00000451492 KCNQ1DNQ9H478 68 aa5.63□□□□□ -1.51
USP54-207ENST00000451492 ZNF706Q9Y5V0 76 aaPredicted RBP5.63□□□□□ -1.51
USP54-207ENST00000451492 SPRR1AP35321 89 aa5.62□□□□□ -1.51
USP54-207ENST00000451492 ADAMTSL4-AS1Q5T5F5 129 aa5.62□□□□□ -1.51
USP54-207ENST00000451492 SOSTDC1Q6X4U4 206 aa5.62□□□□□ -1.51
USP54-207ENST00000451492 SPANXB1Q9NS25 103 aaPredicted RBP5.62□□□□□ -1.51
USP54-207ENST00000451492 EIF4EBP3O60516 100 aaPredicted RBP5.61□□□□□ -1.51
USP54-207ENST00000451492 KRTDAPP60985 99 aa5.61□□□□□ -1.51
USP54-207ENST00000451492 TTTY13Q9BZ97 58 aa5.61□□□□□ -1.51
USP54-207ENST00000451492 TRAV23DV6A0A075B6W5 121 aa5.6□□□□□ -1.51
USP54-207ENST00000451492 TRBV10-2A0A0K0K1G8 114 aa5.6□□□□□ -1.51
USP54-207ENST00000451492 B5MCH6 92 aa5.6□□□□□ -1.51
USP54-207ENST00000451492 KRTAP4-16G5E9R7 235 aaPredicted RBP5.6□□□□□ -1.51
USP54-207ENST00000451492 C3orf79P0CE67 100 aa5.6□□□□□ -1.51
USP54-207ENST00000451492 LINC01545Q5VT33 79 aa5.6□□□□□ -1.51
USP54-207ENST00000451492 GAGE2AQ6NT46 116 aa5.6□□□□□ -1.51
USP54-207ENST00000451492 IGLV9-49A0A0B4J1Y8 123 aa5.59□□□□□ -1.51
USP54-207ENST00000451492 LOC107984156A0A0G2JMH3 177 aa5.59□□□□□ -1.51
USP54-207ENST00000451492 ZNF815PA8K554 130 aa5.59□□□□□ -1.51
USP54-207ENST00000451492 ERC2-IT1O76042 136 aa5.59□□□□□ -1.51
USP54-207ENST00000451492 NDUFC2O95298 119 aa5.59□□□□□ -1.51
USP54-207ENST00000451492 PET117Q6UWS5 81 aa5.59□□□□□ -1.51
USP54-207ENST00000451492 ARL17AQ8IVW1 177 aa5.59□□□□□ -1.51
USP54-207ENST00000451492 ATOH7Q8N100 152 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms