RNA–Protein interactions for RNA: ENST00000449944.5

GGA1-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 5

Gene GGA1, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-214ENST00000449944 UBR4Q5T4S7 5183 aa12.13□□□□□ -0.47
GGA1-214ENST00000449944 HNRNPA3P51991 378 aaKnown RBP12.13□□□□□ -0.47
GGA1-214ENST00000449944 ANKRD39Q53RE8 183 aa12.13□□□□□ -0.47
GGA1-214ENST00000449944 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.13□□□□□ -0.47
GGA1-214ENST00000449944 VAMP8Q9BV40 100 aa12.12□□□□□ -0.47
GGA1-214ENST00000449944 SCGB1D4Q6XE38 83 aa12.11□□□□□ -0.47
GGA1-214ENST00000449944 IGKV2D-26A0A0A0MRZ7 120 aa12.1□□□□□ -0.47
GGA1-214ENST00000449944 A0A0U1RRA0 63 aa12.1□□□□□ -0.47
GGA1-214ENST00000449944 SMIM13P0DJ93 91 aa12.1□□□□□ -0.47
GGA1-214ENST00000449944 XAGE1AQ9HD64 81 aa12.09□□□□□ -0.47
GGA1-214ENST00000449944 A0A087WYN8 130 aa12.08□□□□□ -0.48
GGA1-214ENST00000449944 MIEN1Q9BRT3 115 aa12.08□□□□□ -0.48
GGA1-214ENST00000449944 FAT3Q8TDW7 4589 aa12.07□□□□□ -0.48
GGA1-214ENST00000449944 A0A0J9YXY3 114 aa12.07□□□□□ -0.48
GGA1-214ENST00000449944 S100A12P80511 92 aa12.06□□□□□ -0.48
GGA1-214ENST00000449944 SND1-IT1Q9HBX3 110 aa12.06□□□□□ -0.48
GGA1-214ENST00000449944 PLAC8Q9NZF1 115 aa12.06□□□□□ -0.48
GGA1-214ENST00000449944 PAM16Q9Y3D7 125 aa12.06□□□□□ -0.48
GGA1-214ENST00000449944 TMEM238C9JI98 176 aa12.05□□□□□ -0.48
GGA1-214ENST00000449944 PANO1I0J062 215 aa12.05□□□□□ -0.48
GGA1-214ENST00000449944 RPL24P83731 157 aaKnown RBP12.05□□□□□ -0.48
GGA1-214ENST00000449944 SPATA45Q537H7 98 aa12.05□□□□□ -0.48
GGA1-214ENST00000449944 FAM19A5Q7Z5A7 132 aaPredicted RBP12.05□□□□□ -0.48
GGA1-214ENST00000449944 MIR7-3HGQ8N6C7 128 aa12.05□□□□□ -0.48
GGA1-214ENST00000449944 C7orf33Q8WU49 177 aa12.05□□□□□ -0.48
GGA1-214ENST00000449944 TIMM17BO60830 172 aa12.04□□□□□ -0.48
GGA1-214ENST00000449944 PYY3Q5JQD4 70 aa12.04□□□□□ -0.48
GGA1-214ENST00000449944 C9orf129Q5T035 196 aaKnown RBP12.04□□□□□ -0.48
GGA1-214ENST00000449944 COPS9Q8WXC6 57 aa12.04□□□□□ -0.48
GGA1-214ENST00000449944 PCP2Q8IVA1 136 aa12.03□□□□□ -0.48
GGA1-214ENST00000449944 NKAPP1Q8N9T2 125 aa12.03□□□□□ -0.48
GGA1-214ENST00000449944 TTTY13Q9BZ97 58 aa12.03□□□□□ -0.48
GGA1-214ENST00000449944 MT1HL1P0DM35 61 aa12.02□□□□□ -0.49
GGA1-214ENST00000449944 LBHQ53QV2 105 aaPredicted RBP12.01□□□□□ -0.49
GGA1-214ENST00000449944 PKHD1L1Q86WI1 4243 aa12□□□□□ -0.49
GGA1-214ENST00000449944 M0QXV9 152 aa12□□□□□ -0.49
GGA1-214ENST00000449944 A0A1W2PNN7 141 aa11.99□□□□□ -0.49
GGA1-214ENST00000449944 FAM168BA1KXE4 195 aa11.99□□□□□ -0.49
GGA1-214ENST00000449944 COX8AP10176 69 aa11.99□□□□□ -0.49
GGA1-214ENST00000449944 DAND5Q8N907 189 aa11.99□□□□□ -0.49
GGA1-214ENST00000449944 Q6ZVH6 145 aa11.98□□□□□ -0.49
GGA1-214ENST00000449944 BOD1L2Q8IYS8 172 aa11.98□□□□□ -0.49
GGA1-214ENST00000449944 UBE2BP63146 152 aa11.97□□□□□ -0.49
GGA1-214ENST00000449944 DLEU1O43261 78 aa11.96□□□□□ -0.49
GGA1-214ENST00000449944 SMIM6P0DI80 62 aa11.96□□□□□ -0.49
GGA1-214ENST00000449944 SRSF9Q13242 221 aaKnown RBP eCLIP11.96□□□□□ -0.494e-6■■■■□ 22.1
GGA1-214ENST00000449944 SLC25A34Q6PIV7 304 aa11.96□□□□□ -0.49
GGA1-214ENST00000449944 TP73-AS1Q9UF72 201 aa11.96□□□□□ -0.49
GGA1-214ENST00000449944 C14orf144Q96I85 54 aa11.95□□□□□ -0.5
GGA1-214ENST00000449944 C22orf24Q9Y442 160 aa11.95□□□□□ -0.5
GGA1-214ENST00000449944 IFITM1P13164 125 aa11.94□□□□□ -0.5
GGA1-214ENST00000449944 NPC2P61916 151 aa11.94□□□□□ -0.5
GGA1-214ENST00000449944 ADAMTSL4-AS1Q5T5F5 129 aa11.94□□□□□ -0.5
GGA1-214ENST00000449944 MRPL55Q7Z7F7 128 aaKnown RBP11.94□□□□□ -0.5
GGA1-214ENST00000449944 SPANXDQ9BXN6 97 aa11.94□□□□□ -0.5
GGA1-214ENST00000449944 SPANXCQ9NY87 97 aa11.94□□□□□ -0.5
GGA1-214ENST00000449944 IGLV5-37A0A075B6J1 123 aa11.93□□□□□ -0.5
GGA1-214ENST00000449944 PHF5AQ7RTV0 110 aaKnown RBP11.93□□□□□ -0.5
GGA1-214ENST00000449944 LOC107984156A0A0G2JMH3 177 aa11.92□□□□□ -0.5
GGA1-214ENST00000449944 ARL17AQ8IVW1 177 aa11.92□□□□□ -0.5
GGA1-214ENST00000449944 LINC00308Q8TCZ7 52 aa11.92□□□□□ -0.5
GGA1-214ENST00000449944 LITAFQ99732 161 aa11.92□□□□□ -0.5
GGA1-214ENST00000449944 VPREB1P12018 145 aa11.91□□□□□ -0.5
GGA1-214ENST00000449944 SPANXB1Q9NS25 103 aaPredicted RBP11.91□□□□□ -0.5
GGA1-214ENST00000449944 LOC105371267A0A1B0GV96 52 aa11.9□□□□□ -0.5
GGA1-214ENST00000449944 NDUFC2O95298 119 aa11.9□□□□□ -0.5
GGA1-214ENST00000449944 M0R378 163 aa11.89□□□□□ -0.51
GGA1-214ENST00000449944 HIST1H4GQ99525 98 aa11.89□□□□□ -0.51
GGA1-214ENST00000449944 GAGE10A6NGK3 116 aa11.87□□□□□ -0.51
GGA1-214ENST00000449944 NCR3O14931 201 aa11.87□□□□□ -0.51
GGA1-214ENST00000449944 LINC00518Q8N0U6 118 aa11.87□□□□□ -0.51
GGA1-214ENST00000449944 LINC00167Q96N53 147 aa11.87□□□□□ -0.51
GGA1-214ENST00000449944 PPDPFQ9H3Y8 114 aa11.87□□□□□ -0.51
GGA1-214ENST00000449944 HIGD1BQ9P298 99 aa11.87□□□□□ -0.51
GGA1-214ENST00000449944 TRBV10-2A0A0K0K1G8 114 aa11.86□□□□□ -0.51
GGA1-214ENST00000449944 S100A7L2Q5SY68 101 aa11.86□□□□□ -0.51
GGA1-214ENST00000449944 KRTAP7-1Q8IUC3 87 aa11.86□□□□□ -0.51
GGA1-214ENST00000449944 UQCR10Q9UDW1 63 aa11.86□□□□□ -0.51
GGA1-214ENST00000449944 CBY1Q9Y3M2 126 aa11.86□□□□□ -0.51
GGA1-214ENST00000449944 MUSTN1Q8IVN3 82 aa11.85□□□□□ -0.51
GGA1-214ENST00000449944 RPL37AP8A6NKH3 93 aa11.84□□□□□ -0.51
GGA1-214ENST00000449944 SOSTDC1Q6X4U4 206 aa11.84□□□□□ -0.51
GGA1-214ENST00000449944 IGKV2-28A0A075B6P5 120 aa11.82□□□□□ -0.52
GGA1-214ENST00000449944 IGKV2D-28P01615 120 aa11.82□□□□□ -0.52
GGA1-214ENST00000449944 PRR3P79522 188 aaKnown RBP11.81□□□□□ -0.52
GGA1-214ENST00000449944 C1orf137Q5JT78 98 aa11.81□□□□□ -0.52
GGA1-214ENST00000449944 OR13C6PQ8NH95 151 aa11.81□□□□□ -0.52
GGA1-214ENST00000449944 PSORS1C2Q9UIG4 136 aa11.81□□□□□ -0.52
GGA1-214ENST00000449944 IGLV1-50A0A075B6I6 118 aa11.8□□□□□ -0.52
GGA1-214ENST00000449944 DDTP30046 118 aa11.8□□□□□ -0.52
GGA1-214ENST00000449944 TAL2Q16559 108 aa11.8□□□□□ -0.52
GGA1-214ENST00000449944 Q8NDZ9 215 aa11.8□□□□□ -0.52
GGA1-214ENST00000449944 C12orf57Q99622 126 aa11.8□□□□□ -0.52
GGA1-214ENST00000449944 LINC01600Q96MT4 127 aa11.79□□□□□ -0.52
GGA1-214ENST00000449944 TSTD3H0UI37 97 aa11.78□□□□□ -0.52
GGA1-214ENST00000449944 TMEM126AQ9H061 195 aa11.78□□□□□ -0.52
GGA1-214ENST00000449944 TMEM238LA0A1B0GVL6 79 aa11.77□□□□□ -0.53
GGA1-214ENST00000449944 A6NJY4 79 aa11.77□□□□□ -0.53
GGA1-214ENST00000449944 PRYO14603 147 aa11.77□□□□□ -0.53
GGA1-214ENST00000449944 EIF4EBP3O60516 100 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms