RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.4	□□□□□ -0.58
TOM1-210	ENST00000449058	C6orf99	Q4VX62	202 aa		11.4	□□□□□ -0.58
TOM1-210	ENST00000449058	S100A7L2	Q5SY68	101 aa		11.39	□□□□□ -0.59
TOM1-210	ENST00000449058		H3BNG1	76 aa		11.39	□□□□□ -0.59
TOM1-210	ENST00000449058	LINC00846	Q9NV44	126 aa		11.39	□□□□□ -0.59
TOM1-210	ENST00000449058	TRRAP	Q9Y4A5	3859 aa		11.39	□□□□□ -0.59
TOM1-210	ENST00000449058	TMEM256-PLSCR3	K7ERE1	68 aa		11.38	□□□□□ -0.59
TOM1-210	ENST00000449058	JMJD7-PLA2G4B	H0Y9G9	81 aa		11.37	□□□□□ -0.59
TOM1-210	ENST00000449058	IGLV6-57	P01721	117 aa		11.36	□□□□□ -0.59
TOM1-210	ENST00000449058	LINC00575	Q6W349	94 aa		11.36	□□□□□ -0.59
TOM1-210	ENST00000449058	CCK	P06307	115 aa		11.36	□□□□□ -0.59
TOM1-210	ENST00000449058	C6orf48	Q9UBA6	75 aa		11.36	□□□□□ -0.59
TOM1-210	ENST00000449058	FLNB	O75369	2602 aa	Known RBP	11.36	□□□□□ -0.59
TOM1-210	ENST00000449058	KRTAP10-11	P60412	298 aa		11.35	□□□□□ -0.59
TOM1-210	ENST00000449058	OXLD1	Q5BKU9	147 aa		11.35	□□□□□ -0.59
TOM1-210	ENST00000449058	RETN	Q9HD89	108 aa		11.35	□□□□□ -0.59
TOM1-210	ENST00000449058	KPRP	Q5T749	579 aa	Predicted RBP	11.35	□□□□□ -0.59
TOM1-210	ENST00000449058		Q6JHZ5	121 aa		11.35	□□□□□ -0.59
TOM1-210	ENST00000449058	WFDC10B	Q8IUB3	73 aa		11.35	□□□□□ -0.59
TOM1-210	ENST00000449058	RPL18A	Q02543	176 aa	Known RBP	11.33	□□□□□ -0.6
TOM1-210	ENST00000449058	KRTAP26-1	Q6PEX3	210 aa		11.33	□□□□□ -0.6
TOM1-210	ENST00000449058	HIST1H4A	P62805	103 aa	Known RBP	11.32	□□□□□ -0.6
TOM1-210	ENST00000449058		Q6ZTC4	211 aa		11.31	□□□□□ -0.6
TOM1-210	ENST00000449058	hADV29S1	A0JD25	119 aa		11.31	□□□□□ -0.6
TOM1-210	ENST00000449058	EGFEM1P	Q0D2K5	195 aa		11.3	□□□□□ -0.6
TOM1-210	ENST00000449058	IGKV3D-7	A0A0C4DH55	119 aa		11.28	□□□□□ -0.6
TOM1-210	ENST00000449058	XAGE1A	Q9HD64	81 aa		11.28	□□□□□ -0.6
TOM1-210	ENST00000449058	TRBV10-3	A0A0K0K1G6	114 aa		11.28	□□□□□ -0.6
TOM1-210	ENST00000449058	ZNF561-AS1	K7EIQ3	104 aa		11.27	□□□□□ -0.6
TOM1-210	ENST00000449058	ESRG	Q1W209	222 aa		11.27	□□□□□ -0.61
TOM1-210	ENST00000449058	HIGD2B	Q4VC39	106 aa		11.27	□□□□□ -0.61
TOM1-210	ENST00000449058	CAMK2N2	Q96S95	79 aa		11.27	□□□□□ -0.61
TOM1-210	ENST00000449058	TRAV23DV6	A0A075B6W5	121 aa		11.26	□□□□□ -0.61
TOM1-210	ENST00000449058	C15orf56	Q8N910	161 aa		11.26	□□□□□ -0.61
TOM1-210	ENST00000449058	C3orf22	Q8N5N4	141 aa		11.24	□□□□□ -0.61
TOM1-210	ENST00000449058	DIRC1	Q969H9	104 aa		11.24	□□□□□ -0.61
TOM1-210	ENST00000449058	F8	P00451	2351 aa		11.24	□□□□□ -0.61
TOM1-210	ENST00000449058	VPREB1	P12018	145 aa		11.24	□□□□□ -0.61
TOM1-210	ENST00000449058	C2orf48	Q96LS8	159 aa		11.24	□□□□□ -0.61
TOM1-210	ENST00000449058	ATOX1	O00244	68 aa		11.23	□□□□□ -0.61
TOM1-210	ENST00000449058	UQCRQ	O14949	82 aa		11.23	□□□□□ -0.61
TOM1-210	ENST00000449058		Q6ZRU5	148 aa		11.23	□□□□□ -0.61
TOM1-210	ENST00000449058	LOC110117498	A0A087WWA1	95 aa		11.23	□□□□□ -0.61
TOM1-210	ENST00000449058		Q6ZQY7	126 aa		11.23	□□□□□ -0.61
TOM1-210	ENST00000449058	RBM3	P98179	157 aa	Known RBP	11.22	□□□□□ -0.61
TOM1-210	ENST00000449058	KRTAP24-1	Q3LI83	254 aa		11.22	□□□□□ -0.61
TOM1-210	ENST00000449058		Q6ZQT0	140 aa		11.22	□□□□□ -0.61
TOM1-210	ENST00000449058		H3BQ85	93 aa		11.21	□□□□□ -0.61
TOM1-210	ENST00000449058	ZNF73	O43830	326 aa	Predicted RBP	11.21	□□□□□ -0.61
TOM1-210	ENST00000449058	LINC01556	Q5JQF7	62 aa		11.21	□□□□□ -0.61
TOM1-210	ENST00000449058	ATP5EP2	Q5VTU8	51 aa		11.21	□□□□□ -0.62
TOM1-210	ENST00000449058	TRBV7-6	A0A0J9YX20	115 aa		11.2	□□□□□ -0.62
TOM1-210	ENST00000449058	NDUFC2-KCTD14	E9PQ53	114 aa		11.2	□□□□□ -0.62
TOM1-210	ENST00000449058	PKD1L1	Q8TDX9	2849 aa		11.2	□□□□□ -0.62
TOM1-210	ENST00000449058		A0A087WVE0	104 aa		11.2	□□□□□ -0.62
TOM1-210	ENST00000449058	DEFB131B	A0A096LNP1	70 aa		11.2	□□□□□ -0.62
TOM1-210	ENST00000449058	COX7C	P15954	63 aa		11.2	□□□□□ -0.62
TOM1-210	ENST00000449058	C1orf43	Q9BWL3	253 aa		11.2	□□□□□ -0.62
TOM1-210	ENST00000449058	ELOF1	P60002	83 aa	Known RBP	11.19	□□□□□ -0.62
TOM1-210	ENST00000449058	LAMTOR3	Q9UHA4	124 aa		11.19	□□□□□ -0.62
TOM1-210	ENST00000449058		M0R378	163 aa		11.19	□□□□□ -0.62
TOM1-210	ENST00000449058	COX7B	P24311	80 aa		11.19	□□□□□ -0.62
TOM1-210	ENST00000449058	TENM3	Q9P273	2699 aa		11.18	□□□□□ -0.62
TOM1-210	ENST00000449058	C9orf153	Q5TBE3	101 aa		11.18	□□□□□ -0.62
TOM1-210	ENST00000449058	C11orf45	Q8TAV5	145 aa		11.18	□□□□□ -0.62
TOM1-210	ENST00000449058		F8WDY8	70 aa		11.18	□□□□□ -0.62
TOM1-210	ENST00000449058	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	11.18	□□□□□ -0.62
TOM1-210	ENST00000449058	BAHCC1	Q9P281	2608 aa		11.17	□□□□□ -0.62
TOM1-210	ENST00000449058	C3orf56	Q8N813	242 aa		11.17	□□□□□ -0.62
TOM1-210	ENST00000449058	UBL5	Q9BZL1	73 aa		11.17	□□□□□ -0.62
TOM1-210	ENST00000449058	IGKV2D-24	A0A075B6R9	120 aa		11.15	□□□□□ -0.62
TOM1-210	ENST00000449058	USP17L23	D6RBM5	183 aa		11.14	□□□□□ -0.63
TOM1-210	ENST00000449058		Q6ZRP5	223 aa		11.14	□□□□□ -0.63
TOM1-210	ENST00000449058	CMYA5	Q8N3K9	4069 aa		11.14	□□□□□ -0.63
TOM1-210	ENST00000449058	PDE6G	P18545	87 aa		11.14	□□□□□ -0.63
TOM1-210	ENST00000449058	DSCR8	Q96T75	97 aa		11.14	□□□□□ -0.63
TOM1-210	ENST00000449058		M0R2N4	97 aa		11.13	□□□□□ -0.63
TOM1-210	ENST00000449058	DNAH10OS	P0CZ25	163 aa		11.13	□□□□□ -0.63
TOM1-210	ENST00000449058	ANK2	Q01484	3957 aa		11.12	□□□□□ -0.63
TOM1-210	ENST00000449058	CRYGA	P11844	174 aa		11.12	□□□□□ -0.63
TOM1-210	ENST00000449058	SYCN	Q0VAF6	134 aa		11.12	□□□□□ -0.63
TOM1-210	ENST00000449058	LINC00528	Q8N1L1	170 aa		11.12	□□□□□ -0.63
TOM1-210	ENST00000449058	GHRH	P01286	108 aa		11.12	□□□□□ -0.63
TOM1-210	ENST00000449058	DNAH3	Q8TD57	4116 aa		11.11	□□□□□ -0.63
TOM1-210	ENST00000449058	SERP2	Q8N6R1	65 aa		11.11	□□□□□ -0.63
TOM1-210	ENST00000449058	FBN1	P35555	2871 aa	Known RBP	11.1	□□□□□ -0.63
TOM1-210	ENST00000449058	TRBV7-4	A0A0J9YYF1	115 aa		11.1	□□□□□ -0.63
TOM1-210	ENST00000449058	FAM19A1	Q7Z5A9	133 aa		11.1	□□□□□ -0.63
TOM1-210	ENST00000449058	STAB1	Q9NY15	2570 aa		11.09	□□□□□ -0.63
TOM1-210	ENST00000449058		J3KT08	172 aa		11.09	□□□□□ -0.63
TOM1-210	ENST00000449058	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.08	□□□□□ -0.64
TOM1-210	ENST00000449058	LOC107984640	A0A0U1RRK4	108 aa		11.08	□□□□□ -0.64
TOM1-210	ENST00000449058		Q6ZVQ6	151 aa		11.07	□□□□□ -0.64
TOM1-210	ENST00000449058	TRAV10	A0A0B4J240	114 aa		11.05	□□□□□ -0.64
TOM1-210	ENST00000449058	LINC01547	P58512	204 aa	Predicted RBP	11.05	□□□□□ -0.64
TOM1-210	ENST00000449058	UPK3B	Q9BT76	320 aa		11.05	□□□□□ -0.64
TOM1-210	ENST00000449058	KCNQ1DN	Q9H478	68 aa		11.05	□□□□□ -0.64
TOM1-210	ENST00000449058	TLX1NB	P0CAT3	122 aa		11.05	□□□□□ -0.64
TOM1-210	ENST00000449058	SERTAD4-AS1	Q5TG53	156 aa		11.04	□□□□□ -0.64
TOM1-210	ENST00000449058	LINC00588	Q9Y4M8	146 aa		11.04	□□□□□ -0.64

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