RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 ANKRD17O75179 2603 aaKnown RBP1.01□□□□□ -2.25
PMS1-216ENST00000447734 SPTY2D1-AS1A0A0U1RR47 76 aa1.01□□□□□ -2.25
PMS1-216ENST00000447734 SMIM31A0A1B0GVY4 71 aa1.01□□□□□ -2.25
PMS1-216ENST00000447734 K7EQZ3 153 aa1.01□□□□□ -2.25
PMS1-216ENST00000447734 PRB3Q04118 309 aaPredicted RBP1.01□□□□□ -2.25
PMS1-216ENST00000447734 Q5BKY6 102 aa1.01□□□□□ -2.25
PMS1-216ENST00000447734 HEPN1Q6WQI6 88 aa1.01□□□□□ -2.25
PMS1-216ENST00000447734 CEP170BQ9Y4F5 1589 aaPredicted RBP1□□□□□ -2.25
PMS1-216ENST00000447734 PLCE1Q9P212 2302 aa1□□□□□ -2.25
PMS1-216ENST00000447734 CLIP1P30622 1438 aa0.99□□□□□ -2.25
PMS1-216ENST00000447734 H3BVH4 76 aa0.99□□□□□ -2.25
PMS1-216ENST00000447734 I3L3M4 83 aa0.99□□□□□ -2.25
PMS1-216ENST00000447734 RPL38P63173 70 aaKnown RBP0.99□□□□□ -2.25
PMS1-216ENST00000447734 USP32Q8NFA0 1604 aa0.99□□□□□ -2.25
PMS1-216ENST00000447734 CACNA1HO95180 2353 aa0.99□□□□□ -2.25
PMS1-216ENST00000447734 DOPEY2Q9Y3R5 2298 aa0.99□□□□□ -2.25
PMS1-216ENST00000447734 ZNF831Q5JPB2 1677 aa0.98□□□□□ -2.25
PMS1-216ENST00000447734 COX8AP10176 69 aa0.98□□□□□ -2.25
PMS1-216ENST00000447734 COX6B1P14854 86 aa0.98□□□□□ -2.25
PMS1-216ENST00000447734 BIVM-ERCC5R4GMW8 1640 aa0.97□□□□□ -2.25
PMS1-216ENST00000447734 NREPQ16612 68 aa0.97□□□□□ -2.25
PMS1-216ENST00000447734 COL14A1Q05707 1796 aaKnown RBP0.97□□□□□ -2.25
PMS1-216ENST00000447734 ZC3H13Q5T200 1668 aaKnown RBP0.97□□□□□ -2.25
PMS1-216ENST00000447734 ADAMTS12P58397 1594 aa0.96□□□□□ -2.26
PMS1-216ENST00000447734 MAGI3Q5TCQ9 1506 aa0.96□□□□□ -2.26
PMS1-216ENST00000447734 QSER1Q2KHR3 1735 aa0.96□□□□□ -2.26
PMS1-216ENST00000447734 CPSF4LA6NMK7 179 aaKnown RBP0.96□□□□□ -2.26
PMS1-216ENST00000447734 ARFGEF2Q9Y6D5 1785 aa0.96□□□□□ -2.26
PMS1-216ENST00000447734 ERICH3Q5RHP9 1530 aa0.95□□□□□ -2.26
PMS1-216ENST00000447734 MEGF8Q7Z7M0 2845 aa0.95□□□□□ -2.26
PMS1-216ENST00000447734 POLR1AO95602 1720 aaPredicted RBP0.95□□□□□ -2.26
PMS1-216ENST00000447734 USF3Q68DE3 2245 aa0.95□□□□□ -2.26
PMS1-216ENST00000447734 CD163L1Q9NR16 1453 aa0.94□□□□□ -2.26
PMS1-216ENST00000447734 HMGA1P17096 107 aaKnown RBP0.94□□□□□ -2.26
PMS1-216ENST00000447734 FMN2Q9NZ56 1722 aa0.94□□□□□ -2.26
PMS1-216ENST00000447734 TTC28Q96AY4 2481 aa0.94□□□□□ -2.26
PMS1-216ENST00000447734 C2CD3Q4AC94 2353 aa0.93□□□□□ -2.26
PMS1-216ENST00000447734 Q5VSD8 79 aa0.93□□□□□ -2.26
PMS1-216ENST00000447734 MRPL34Q9BQ48 92 aaKnown RBP0.93□□□□□ -2.26
PMS1-216ENST00000447734 HILPDAQ9Y5L2 63 aa0.93□□□□□ -2.26
PMS1-216ENST00000447734 DOT1LQ8TEK3 1739 aa0.92□□□□□ -2.26
PMS1-216ENST00000447734 ANKRD50Q9ULJ7 1429 aa0.92□□□□□ -2.26
PMS1-216ENST00000447734 LCE6AA0A183 80 aa0.92□□□□□ -2.26
PMS1-216ENST00000447734 GNG13Q9P2W3 67 aa0.92□□□□□ -2.26
PMS1-216ENST00000447734 SPTBN2O15020 2390 aa0.92□□□□□ -2.26
PMS1-216ENST00000447734 CFAP43Q8NDM7 1665 aa0.91□□□□□ -2.26
PMS1-216ENST00000447734 CACNA1EQ15878 2313 aa0.91□□□□□ -2.26
PMS1-216ENST00000447734 SPRR1BP22528 89 aa0.91□□□□□ -2.26
PMS1-216ENST00000447734 SPRR1AP35321 89 aa0.91□□□□□ -2.26
PMS1-216ENST00000447734 SPINK6Q6UWN8 80 aa0.91□□□□□ -2.26
PMS1-216ENST00000447734 TIAM2Q8IVF5 1701 aa0.91□□□□□ -2.26
PMS1-216ENST00000447734 FBN3Q75N90 2809 aa0.9□□□□□ -2.26
PMS1-216ENST00000447734 MROH1Q8NDA8 1641 aa0.9□□□□□ -2.26
PMS1-216ENST00000447734 NDUFA4O00483 81 aa0.9□□□□□ -2.27
PMS1-216ENST00000447734 CCL22O00626 93 aa0.9□□□□□ -2.27
PMS1-216ENST00000447734 ATXN8Q156A1 80 aa0.9□□□□□ -2.27
PMS1-216ENST00000447734 EFCAB5A4FU69 1503 aa0.89□□□□□ -2.27
PMS1-216ENST00000447734 LMTK2Q8IWU2 1503 aa0.89□□□□□ -2.27
PMS1-216ENST00000447734 ASXL1Q8IXJ9 1541 aa0.89□□□□□ -2.27
PMS1-216ENST00000447734 PTPRQQ9UMZ3 2332 aa0.89□□□□□ -2.27
PMS1-216ENST00000447734 BCORQ6W2J9 1755 aa0.89□□□□□ -2.27
PMS1-216ENST00000447734 KRTAP19-3Q7Z4W3 81 aa0.89□□□□□ -2.27
PMS1-216ENST00000447734 APLNQ9ULZ1 77 aa0.89□□□□□ -2.27
PMS1-216ENST00000447734 PTPRZ1P23471 2315 aaPredicted RBP0.89□□□□□ -2.27
PMS1-216ENST00000447734 MADDQ8WXG6 1647 aa0.89□□□□□ -2.27
PMS1-216ENST00000447734 F8P00451 2351 aa0.89□□□□□ -2.27
PMS1-216ENST00000447734 CDC42BPGQ6DT37 1551 aa0.88□□□□□ -2.27
PMS1-216ENST00000447734 TSC2P49815 1807 aa0.88□□□□□ -2.27
PMS1-216ENST00000447734 A0A087WWC5 75 aa0.88□□□□□ -2.27
PMS1-216ENST00000447734 DEFB105AQ8NG35 78 aa0.88□□□□□ -2.27
PMS1-216ENST00000447734 FXYD6Q9H0Q3 95 aa0.88□□□□□ -2.27
PMS1-216ENST00000447734 ITSN1Q15811 1721 aa0.87□□□□□ -2.27
PMS1-216ENST00000447734 PREX1Q8TCU6 1659 aa0.87□□□□□ -2.27
PMS1-216ENST00000447734 NWD1Q149M9 1564 aa0.87□□□□□ -2.27
PMS1-216ENST00000447734 RICTORQ6R327 1708 aa0.86□□□□□ -2.27
PMS1-216ENST00000447734 ABCA9Q8IUA7 1624 aa0.86□□□□□ -2.27
PMS1-216ENST00000447734 POLQO75417 2590 aa0.86□□□□□ -2.27
PMS1-216ENST00000447734 S100ZQ8WXG8 99 aa0.86□□□□□ -2.27
PMS1-216ENST00000447734 HFM1A2PYH4 1435 aa0.86□□□□□ -2.27
PMS1-216ENST00000447734 DIP2AQ14689 1571 aa0.86□□□□□ -2.27
PMS1-216ENST00000447734 INO80Q9ULG1 1556 aaPredicted RBP0.86□□□□□ -2.27
PMS1-216ENST00000447734 ABCA12Q86UK0 2595 aa0.86□□□□□ -2.27
PMS1-216ENST00000447734 PLCH1Q4KWH8 1693 aa0.85□□□□□ -2.27
PMS1-216ENST00000447734 DEFB109BQ30KR1 87 aa0.85□□□□□ -2.27
PMS1-216ENST00000447734 ENHOQ6UWT2 76 aa0.85□□□□□ -2.27
PMS1-216ENST00000447734 SPINK4O60575 86 aa0.84□□□□□ -2.27
PMS1-216ENST00000447734 COX6B2Q6YFQ2 88 aa0.84□□□□□ -2.27
PMS1-216ENST00000447734 CDKN2A-AS1Q9UH64 79 aa0.84□□□□□ -2.27
PMS1-216ENST00000447734 EIF2AK4Q9P2K8 1649 aaKnown RBP0.84□□□□□ -2.28
PMS1-216ENST00000447734 WIZO95785 1651 aa0.84□□□□□ -2.28
PMS1-216ENST00000447734 PIEZO2Q9H5I5 2752 aa0.84□□□□□ -2.28
PMS1-216ENST00000447734 PARP4Q9UKK3 1724 aaKnown RBP0.84□□□□□ -2.28
PMS1-216ENST00000447734 TENM1Q9UKZ4 2725 aa0.83□□□□□ -2.28
PMS1-216ENST00000447734 CICQ96RK0 1608 aaPredicted RBP0.83□□□□□ -2.28
PMS1-216ENST00000447734 C3orf79P0CE67 100 aa0.83□□□□□ -2.28
PMS1-216ENST00000447734 KLK9Q2XQG4 91 aa0.83□□□□□ -2.28
PMS1-216ENST00000447734 H1FX-AS1Q4G0G2 97 aa0.83□□□□□ -2.28
PMS1-216ENST00000447734 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.83□□□□□ -2.282e-7■■■■■ 33.1
PMS1-216ENST00000447734 BDP1A6H8Y1 2624 aa0.83□□□□□ -2.28
PMS1-216ENST00000447734 FBN2P35556 2912 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms