RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 C22orf24Q9Y442 160 aa7.62□□□□□ -1.19
SSR4-205ENST00000447375 SYS1-DBNDD2H3BUS1 97 aa7.61□□□□□ -1.19
SSR4-205ENST00000447375 PMCHL2Q9BQD1 86 aa7.61□□□□□ -1.19
SSR4-205ENST00000447375 TP73-AS1Q9UF72 201 aa7.61□□□□□ -1.19
SSR4-205ENST00000447375 IGKCP01834 107 aa7.6□□□□□ -1.19
SSR4-205ENST00000447375 LBHQ53QV2 105 aaPredicted RBP7.6□□□□□ -1.19
SSR4-205ENST00000447375 SPINK6Q6UWN8 80 aa7.6□□□□□ -1.19
SSR4-205ENST00000447375 SND1-IT1Q9HBX3 110 aa7.6□□□□□ -1.19
SSR4-205ENST00000447375 LEPROTO15243 131 aa7.59□□□□□ -1.19
SSR4-205ENST00000447375 C1orf137Q5JT78 98 aa7.59□□□□□ -1.19
SSR4-205ENST00000447375 IGLV5-37A0A075B6J1 123 aa7.58□□□□□ -1.2
SSR4-205ENST00000447375 HERV-K104P63124 156 aa7.58□□□□□ -1.2
SSR4-205ENST00000447375 UBE2BP63146 152 aa7.58□□□□□ -1.2
SSR4-205ENST00000447375 LINC01545Q5VT33 79 aa7.58□□□□□ -1.2
SSR4-205ENST00000447375 PET117Q6UWS5 81 aa7.58□□□□□ -1.2
SSR4-205ENST00000447375 MRPL55Q7Z7F7 128 aaKnown RBP7.58□□□□□ -1.2
SSR4-205ENST00000447375 PLEKHB2Q96CS7 222 aa7.58□□□□□ -1.2
SSR4-205ENST00000447375 NDUFA12Q9UI09 145 aa7.58□□□□□ -1.2
SSR4-205ENST00000447375 MYMXA0A1B0GTQ4 84 aa7.57□□□□□ -1.2
SSR4-205ENST00000447375 IGLV7-43P04211 117 aa7.57□□□□□ -1.2
SSR4-205ENST00000447375 LINC00158P58513 81 aa7.57□□□□□ -1.2
SSR4-205ENST00000447375 TSPEAR-AS2P59090 65 aa7.57□□□□□ -1.2
SSR4-205ENST00000447375 HERVK_113P61574 105 aa7.57□□□□□ -1.2
SSR4-205ENST00000447375 LINC00587B1AMM8 73 aa7.56□□□□□ -1.2
SSR4-205ENST00000447375 J3QQQ9 107 aa7.56□□□□□ -1.2
SSR4-205ENST00000447375 C3orf79P0CE67 100 aa7.56□□□□□ -1.2
SSR4-205ENST00000447375 LINC00167Q96N53 147 aa7.56□□□□□ -1.2
SSR4-205ENST00000447375 SMIM13P0DJ93 91 aa7.55□□□□□ -1.2
SSR4-205ENST00000447375 A0A0U1RRA0 63 aa7.54□□□□□ -1.2
SSR4-205ENST00000447375 E9PLD3 99 aa7.54□□□□□ -1.2
SSR4-205ENST00000447375 VPREB1P12018 145 aa7.54□□□□□ -1.2
SSR4-205ENST00000447375 NMUP48645 174 aa7.54□□□□□ -1.2
SSR4-205ENST00000447375 RPL24P83731 157 aaKnown RBP7.54□□□□□ -1.2
SSR4-205ENST00000447375 NKAPP1Q8N9T2 125 aa7.54□□□□□ -1.2
SSR4-205ENST00000447375 RPL37AP8A6NKH3 93 aa7.53□□□□□ -1.2
SSR4-205ENST00000447375 KRTDAPP60985 99 aa7.53□□□□□ -1.2
SSR4-205ENST00000447375 MEIG1Q5JSS6 88 aa7.53□□□□□ -1.2
SSR4-205ENST00000447375 Q8NDZ9 215 aa7.53□□□□□ -1.2
SSR4-205ENST00000447375 GAGE10A6NGK3 116 aa7.52□□□□□ -1.21
SSR4-205ENST00000447375 LGALS3P17931 250 aaKnown RBP7.52□□□□□ -1.21
SSR4-205ENST00000447375 MIR7-3HGQ8N6C7 128 aa7.52□□□□□ -1.21
SSR4-205ENST00000447375 FSIP2Q5CZC0 6907 aa7.52□□□□□ -1.21
SSR4-205ENST00000447375 DIRC1Q969H9 104 aa7.51□□□□□ -1.21
SSR4-205ENST00000447375 CRCT1Q9UGL9 99 aa7.51□□□□□ -1.21
SSR4-205ENST00000447375 IGLV1-50A0A075B6I6 118 aa7.5□□□□□ -1.21
SSR4-205ENST00000447375 BCE1O60756 84 aa7.5□□□□□ -1.21
SSR4-205ENST00000447375 HIST3H2BBQ8N257 126 aa7.5□□□□□ -1.21
SSR4-205ENST00000447375 LOC107984156A0A0G2JMH3 177 aa7.49□□□□□ -1.21
SSR4-205ENST00000447375 H0Y9J4 135 aa7.49□□□□□ -1.21
SSR4-205ENST00000447375 ZNF861PO60384 105 aa7.49□□□□□ -1.21
SSR4-205ENST00000447375 ARL17AQ8IVW1 177 aa7.49□□□□□ -1.21
SSR4-205ENST00000447375 A0A0J9YXY3 114 aa7.48□□□□□ -1.21
SSR4-205ENST00000447375 C20orf202A1L168 122 aa7.48□□□□□ -1.21
SSR4-205ENST00000447375 BOD1L2Q8IYS8 172 aa7.48□□□□□ -1.21
SSR4-205ENST00000447375 HIST1H2BLQ99880 126 aa7.48□□□□□ -1.21
SSR4-205ENST00000447375 IGKV2-28A0A075B6P5 120 aa7.47□□□□□ -1.21
SSR4-205ENST00000447375 IGKV2D-26A0A0A0MRZ7 120 aa7.47□□□□□ -1.21
SSR4-205ENST00000447375 M0R378 163 aa7.47□□□□□ -1.21
SSR4-205ENST00000447375 IGKV2D-28P01615 120 aa7.47□□□□□ -1.21
SSR4-205ENST00000447375 S100A6P06703 90 aa7.47□□□□□ -1.21
SSR4-205ENST00000447375 S100A2P29034 98 aa7.47□□□□□ -1.21
SSR4-205ENST00000447375 AKR1D1P51857 326 aa7.47□□□□□ -1.21
SSR4-205ENST00000447375 PRR4Q16378 134 aa7.47□□□□□ -1.21
SSR4-205ENST00000447375 DAND5Q8N907 189 aa7.47□□□□□ -1.21
SSR4-205ENST00000447375 RPL28P46779 137 aaKnown RBP7.46□□□□□ -1.22
SSR4-205ENST00000447375 ADAMTSL4-AS1Q5T5F5 129 aa7.46□□□□□ -1.22
SSR4-205ENST00000447375 KRTAP13-1Q8IUC0 172 aa7.45□□□□□ -1.22
SSR4-205ENST00000447375 TMEM126AQ9H061 195 aa7.45□□□□□ -1.22
SSR4-205ENST00000447375 TMEM238C9JI98 176 aa7.44□□□□□ -1.22
SSR4-205ENST00000447375 SNRPEP62304 92 aaKnown RBP7.44□□□□□ -1.22
SSR4-205ENST00000447375 LCE2DQ5TA82 110 aaPredicted RBP7.44□□□□□ -1.22
SSR4-205ENST00000447375 C5orf52A6NGY3 159 aa7.43□□□□□ -1.22
SSR4-205ENST00000447375 ZNF815PA8K554 130 aa7.43□□□□□ -1.22
SSR4-205ENST00000447375 TIMM17BO60830 172 aa7.43□□□□□ -1.22
SSR4-205ENST00000447375 KRTAP1-4P0C5Y4 121 aa7.43□□□□□ -1.22
SSR4-205ENST00000447375 ANKRD39Q53RE8 183 aa7.43□□□□□ -1.22
SSR4-205ENST00000447375 ATOH7Q8N100 152 aa7.43□□□□□ -1.22
SSR4-205ENST00000447375 LITAFQ99732 161 aa7.43□□□□□ -1.22
SSR4-205ENST00000447375 TRBV10-2A0A0K0K1G8 114 aa7.42□□□□□ -1.22
SSR4-205ENST00000447375 NCR3O14931 201 aa7.42□□□□□ -1.22
SSR4-205ENST00000447375 EIF4EBP3O60516 100 aaPredicted RBP7.42□□□□□ -1.22
SSR4-205ENST00000447375 NDUFC2O95298 119 aa7.42□□□□□ -1.22
SSR4-205ENST00000447375 UBE2AP49459 152 aa7.42□□□□□ -1.22
SSR4-205ENST00000447375 SOSTDC1Q6X4U4 206 aa7.42□□□□□ -1.22
SSR4-205ENST00000447375 MIEN1Q9BRT3 115 aa7.42□□□□□ -1.22
SSR4-205ENST00000447375 TTTY13Q9BZ97 58 aa7.42□□□□□ -1.22
SSR4-205ENST00000447375 KCNQ1DNQ9H478 68 aa7.41□□□□□ -1.22
SSR4-205ENST00000447375 FAM19A1Q7Z5A9 133 aa7.4□□□□□ -1.22
SSR4-205ENST00000447375 PRR26Q8N8Z3 221 aa7.4□□□□□ -1.22
SSR4-205ENST00000447375 SPANXB1Q9NS25 103 aaPredicted RBP7.4□□□□□ -1.22
SSR4-205ENST00000447375 TRBV10-3A0A0K0K1G6 114 aa7.39□□□□□ -1.23
SSR4-205ENST00000447375 PRYO14603 147 aa7.39□□□□□ -1.23
SSR4-205ENST00000447375 SPRR1AP35321 89 aa7.39□□□□□ -1.23
SSR4-205ENST00000447375 PRLHP81277 87 aa7.39□□□□□ -1.23
SSR4-205ENST00000447375 LINC00308Q8TCZ7 52 aa7.39□□□□□ -1.23
SSR4-205ENST00000447375 NPC2P61916 151 aa7.38□□□□□ -1.23
SSR4-205ENST00000447375 PCP2Q8IVA1 136 aa7.38□□□□□ -1.23
SSR4-205ENST00000447375 LINC00337Q8N6G1 96 aa7.38□□□□□ -1.23
SSR4-205ENST00000447375 KRTAP4-16G5E9R7 235 aaPredicted RBP7.37□□□□□ -1.23
SSR4-205ENST00000447375 IGLV6-57P01721 117 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms