RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 J3QQQ9 107 aa7.34□□□□□ -1.23
RFC4-208ENST00000447345 SMIM13P0DJ93 91 aa7.34□□□□□ -1.23
RFC4-208ENST00000447345 LGALS3P17931 250 aaKnown RBP7.34□□□□□ -1.23
RFC4-208ENST00000447345 LINC01545Q5VT33 79 aa7.34□□□□□ -1.23
RFC4-208ENST00000447345 PET117Q6UWS5 81 aa7.34□□□□□ -1.23
RFC4-208ENST00000447345 MRPL55Q7Z7F7 128 aaKnown RBP7.34□□□□□ -1.23
RFC4-208ENST00000447345 NKAPP1Q8N9T2 125 aa7.34□□□□□ -1.23
RFC4-208ENST00000447345 MYMXA0A1B0GTQ4 84 aa7.33□□□□□ -1.24
RFC4-208ENST00000447345 RPL37AP8A6NKH3 93 aa7.32□□□□□ -1.24
RFC4-208ENST00000447345 KRTAP29-1A8MX34 341 aaPredicted RBP7.32□□□□□ -1.24
RFC4-208ENST00000447345 HERV-K104P63124 156 aa7.32□□□□□ -1.24
RFC4-208ENST00000447345 LBHQ53QV2 105 aaPredicted RBP7.32□□□□□ -1.24
RFC4-208ENST00000447345 PLA2G2DQ9UNK4 145 aa7.32□□□□□ -1.24
RFC4-208ENST00000447345 TMA7Q9Y2S6 64 aaKnown RBP7.32□□□□□ -1.24
RFC4-208ENST00000447345 SPINK6Q6UWN8 80 aa7.31□□□□□ -1.24
RFC4-208ENST00000447345 MIR7-3HGQ8N6C7 128 aa7.31□□□□□ -1.24
RFC4-208ENST00000447345 Q8NDZ9 215 aa7.31□□□□□ -1.24
RFC4-208ENST00000447345 LINC00167Q96N53 147 aa7.31□□□□□ -1.24
RFC4-208ENST00000447345 TP73-AS1Q9UF72 201 aa7.31□□□□□ -1.24
RFC4-208ENST00000447345 IGLV5-37A0A075B6J1 123 aa7.3□□□□□ -1.24
RFC4-208ENST00000447345 C20orf202A1L168 122 aa7.3□□□□□ -1.24
RFC4-208ENST00000447345 E9PLD3 99 aa7.3□□□□□ -1.24
RFC4-208ENST00000447345 IGLV7-43P04211 117 aa7.3□□□□□ -1.24
RFC4-208ENST00000447345 S100A6P06703 90 aa7.3□□□□□ -1.24
RFC4-208ENST00000447345 VPREB1P12018 145 aa7.3□□□□□ -1.24
RFC4-208ENST00000447345 S100A2P29034 98 aa7.3□□□□□ -1.24
RFC4-208ENST00000447345 HIST3H2BBQ8N257 126 aa7.3□□□□□ -1.24
RFC4-208ENST00000447345 DAND5Q8N907 189 aa7.3□□□□□ -1.24
RFC4-208ENST00000447345 IGKV2-28A0A075B6P5 120 aa7.29□□□□□ -1.24
RFC4-208ENST00000447345 OXTP01178 125 aa7.29□□□□□ -1.24
RFC4-208ENST00000447345 IGKV2D-28P01615 120 aa7.29□□□□□ -1.24
RFC4-208ENST00000447345 NMUP48645 174 aa7.29□□□□□ -1.24
RFC4-208ENST00000447345 SRSF9Q13242 221 aaKnown RBP eCLIP7.29□□□□□ -1.24
RFC4-208ENST00000447345 ATOH7Q8N100 152 aa7.29□□□□□ -1.24
RFC4-208ENST00000447345 RPL24P83731 157 aaKnown RBP7.28□□□□□ -1.24
RFC4-208ENST00000447345 HIST1H2BLQ99880 126 aa7.28□□□□□ -1.24
RFC4-208ENST00000447345 HERC1Q15751 4861 aa7.27□□□□□ -1.25
RFC4-208ENST00000447345 IGKV2D-26A0A0A0MRZ7 120 aa7.27□□□□□ -1.25
RFC4-208ENST00000447345 LINC00587B1AMM8 73 aa7.27□□□□□ -1.25
RFC4-208ENST00000447345 NCR3O14931 201 aa7.27□□□□□ -1.25
RFC4-208ENST00000447345 BOD1L2Q8IYS8 172 aa7.27□□□□□ -1.25
RFC4-208ENST00000447345 A0A0J9YXY3 114 aa7.26□□□□□ -1.25
RFC4-208ENST00000447345 NPC2P61916 151 aa7.26□□□□□ -1.25
RFC4-208ENST00000447345 SNRPEP62304 92 aaKnown RBP7.26□□□□□ -1.25
RFC4-208ENST00000447345 REG3GQ6UW15 175 aa7.26□□□□□ -1.25
RFC4-208ENST00000447345 TTTY13Q9BZ97 58 aa7.26□□□□□ -1.25
RFC4-208ENST00000447345 DIRC1Q969H9 104 aa7.25□□□□□ -1.25
RFC4-208ENST00000447345 ZNF815PA8K554 130 aa7.24□□□□□ -1.25
RFC4-208ENST00000447345 TMEM238C9JI98 176 aa7.24□□□□□ -1.25
RFC4-208ENST00000447345 H0Y9J4 135 aa7.24□□□□□ -1.25
RFC4-208ENST00000447345 BCE1O60756 84 aa7.24□□□□□ -1.25
RFC4-208ENST00000447345 ANKRD39Q53RE8 183 aa7.24□□□□□ -1.25
RFC4-208ENST00000447345 MIEN1Q9BRT3 115 aa7.24□□□□□ -1.25
RFC4-208ENST00000447345 IGLV1-50A0A075B6I6 118 aa7.23□□□□□ -1.25
RFC4-208ENST00000447345 MT1HL1P0DM35 61 aa7.23□□□□□ -1.25
RFC4-208ENST00000447345 M0R378 163 aa7.22□□□□□ -1.25
RFC4-208ENST00000447345 UBE2AP49459 152 aa7.22□□□□□ -1.25
RFC4-208ENST00000447345 ADAMTSL4-AS1Q5T5F5 129 aa7.22□□□□□ -1.25
RFC4-208ENST00000447345 LINC01600Q96MT4 127 aa7.22□□□□□ -1.25
RFC4-208ENST00000447345 ZNF861PO60384 105 aa7.21□□□□□ -1.26
RFC4-208ENST00000447345 RPL28P46779 137 aaKnown RBP7.21□□□□□ -1.26
RFC4-208ENST00000447345 PRLHP81277 87 aa7.21□□□□□ -1.26
RFC4-208ENST00000447345 SOSTDC1Q6X4U4 206 aa7.21□□□□□ -1.26
RFC4-208ENST00000447345 TMEM126AQ9H061 195 aa7.21□□□□□ -1.26
RFC4-208ENST00000447345 C5orf52A6NGY3 159 aa7.2□□□□□ -1.26
RFC4-208ENST00000447345 EIF4EBP3O60516 100 aaPredicted RBP7.2□□□□□ -1.26
RFC4-208ENST00000447345 FAM19A1Q7Z5A9 133 aa7.2□□□□□ -1.26
RFC4-208ENST00000447345 AKR1D1P51857 326 aa7.19□□□□□ -1.26
RFC4-208ENST00000447345 SCGB1D4Q6XE38 83 aa7.19□□□□□ -1.26
RFC4-208ENST00000447345 PCP2Q8IVA1 136 aa7.19□□□□□ -1.26
RFC4-208ENST00000447345 LITAFQ99732 161 aa7.19□□□□□ -1.26
RFC4-208ENST00000447345 TNXBP22105 4242 aa7.19□□□□□ -1.26
RFC4-208ENST00000447345 TRBV10-3A0A0K0K1G6 114 aa7.18□□□□□ -1.26
RFC4-208ENST00000447345 LOC107984156A0A0G2JMH3 177 aa7.17□□□□□ -1.26
RFC4-208ENST00000447345 PRYO14603 147 aa7.17□□□□□ -1.26
RFC4-208ENST00000447345 TIMM17BO60830 172 aa7.17□□□□□ -1.26
RFC4-208ENST00000447345 SCGB1D1O95968 90 aa7.17□□□□□ -1.26
RFC4-208ENST00000447345 KRTAP13-1Q8IUC0 172 aa7.17□□□□□ -1.26
RFC4-208ENST00000447345 ARL17AQ8IVW1 177 aa7.17□□□□□ -1.26
RFC4-208ENST00000447345 PRR26Q8N8Z3 221 aa7.17□□□□□ -1.26
RFC4-208ENST00000447345 SPANXB1Q9NS25 103 aaPredicted RBP7.17□□□□□ -1.26
RFC4-208ENST00000447345 HSBP1L1C9JCN9 74 aa7.16□□□□□ -1.26
RFC4-208ENST00000447345 KRTAP1-4P0C5Y4 121 aa7.16□□□□□ -1.26
RFC4-208ENST00000447345 DDTP30046 118 aa7.16□□□□□ -1.26
RFC4-208ENST00000447345 LINC00308Q8TCZ7 52 aa7.16□□□□□ -1.26
RFC4-208ENST00000447345 TRBV10-2A0A0K0K1G8 114 aa7.15□□□□□ -1.26
RFC4-208ENST00000447345 NDUFC2O95298 119 aa7.15□□□□□ -1.26
RFC4-208ENST00000447345 S100A7L2Q5SY68 101 aa7.15□□□□□ -1.26
RFC4-208ENST00000447345 KRTAP10-8P60410 259 aa7.14□□□□□ -1.27
RFC4-208ENST00000447345 S100A12P80511 92 aa7.14□□□□□ -1.27
RFC4-208ENST00000447345 HIGD2AQ9BW72 106 aa7.14□□□□□ -1.27
RFC4-208ENST00000447345 ETDCA0A1B0GVM5 59 aa7.13□□□□□ -1.27
RFC4-208ENST00000447345 SPANXDQ9BXN6 97 aa7.13□□□□□ -1.27
RFC4-208ENST00000447345 KCNQ1DNQ9H478 68 aa7.13□□□□□ -1.27
RFC4-208ENST00000447345 SPANXCQ9NY87 97 aa7.13□□□□□ -1.27
RFC4-208ENST00000447345 C4orf48Q5BLP8 95 aa7.12□□□□□ -1.27
RFC4-208ENST00000447345 ANAPC11Q9NYG5 84 aa7.12□□□□□ -1.27
RFC4-208ENST00000447345 TRAV23DV6A0A075B6W5 121 aa7.11□□□□□ -1.27
RFC4-208ENST00000447345 IGLV6-57P01721 117 aa7.11□□□□□ -1.27
RFC4-208ENST00000447345 SPRR1AP35321 89 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms