RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 RPS28P62857 69 aaKnown RBP12.91□□□□□ -0.34
SDCBP-204ENST00000447182 Q6ZQT0 140 aa12.91□□□□□ -0.34
SDCBP-204ENST00000447182 RBM3P98179 157 aaKnown RBP12.91□□□□□ -0.34
SDCBP-204ENST00000447182 PRR34Q9NV39 138 aa12.91□□□□□ -0.34
SDCBP-204ENST00000447182 CYSRT1A8MQ03 144 aa12.9□□□□□ -0.34
SDCBP-204ENST00000447182 TMEM258P61165 79 aa12.9□□□□□ -0.34
SDCBP-204ENST00000447182 GVQW2A0A096LPI5 108 aaPredicted RBP12.89□□□□□ -0.35
SDCBP-204ENST00000447182 Q8NAQ8 132 aa12.89□□□□□ -0.35
SDCBP-204ENST00000447182 CELA1Q9UNI1 258 aa12.89□□□□□ -0.35
SDCBP-204ENST00000447182 H3BQ85 93 aa12.88□□□□□ -0.35
SDCBP-204ENST00000447182 MIFP14174 115 aa12.88□□□□□ -0.35
SDCBP-204ENST00000447182 ENHOQ6UWT2 76 aa12.88□□□□□ -0.35
SDCBP-204ENST00000447182 SPATA3Q8NHX4 192 aa12.88□□□□□ -0.35
SDCBP-204ENST00000447182 TENM4Q6N022 2769 aa12.87□□□□□ -0.35
SDCBP-204ENST00000447182 FAM19A1Q7Z5A9 133 aa12.87□□□□□ -0.35
SDCBP-204ENST00000447182 WFDC9Q8NEX5 89 aa12.86□□□□□ -0.35
SDCBP-204ENST00000447182 LOC107984640A0A0U1RRK4 108 aa12.86□□□□□ -0.35
SDCBP-204ENST00000447182 GHRHP01286 108 aa12.85□□□□□ -0.35
SDCBP-204ENST00000447182 LAMTOR3Q9UHA4 124 aa12.85□□□□□ -0.35
SDCBP-204ENST00000447182 SPART-AS1P0CW21 52 aa12.84□□□□□ -0.35
SDCBP-204ENST00000447182 KLK12Q9UKR0 248 aa12.84□□□□□ -0.35
SDCBP-204ENST00000447182 ITPR2Q14571 2701 aa12.84□□□□□ -0.35
SDCBP-204ENST00000447182 PDE6GP18545 87 aa12.83□□□□□ -0.35
SDCBP-204ENST00000447182 HIVEP2P31629 2446 aa12.83□□□□□ -0.36
SDCBP-204ENST00000447182 TRAV23DV6A0A075B6W5 121 aa12.83□□□□□ -0.36
SDCBP-204ENST00000447182 Q6ZQY7 126 aa12.82□□□□□ -0.36
SDCBP-204ENST00000447182 DSCR8Q96T75 97 aa12.82□□□□□ -0.36
SDCBP-204ENST00000447182 SMR3AQ99954 134 aa12.82□□□□□ -0.36
SDCBP-204ENST00000447182 VWFP04275 2813 aa12.81□□□□□ -0.36
SDCBP-204ENST00000447182 C6orf48Q9UBA6 75 aa12.81□□□□□ -0.36
SDCBP-204ENST00000447182 BCE1O60756 84 aa12.8□□□□□ -0.36
SDCBP-204ENST00000447182 DPH3Q96FX2 82 aa12.8□□□□□ -0.36
SDCBP-204ENST00000447182 DIRC1Q969H9 104 aa12.8□□□□□ -0.36
SDCBP-204ENST00000447182 HTN3P15516 51 aa12.79□□□□□ -0.36
SDCBP-204ENST00000447182 M0R2N4 97 aa12.78□□□□□ -0.36
SDCBP-204ENST00000447182 FAM19A5Q7Z5A7 132 aaPredicted RBP12.78□□□□□ -0.36
SDCBP-204ENST00000447182 LINC01547P58512 204 aaPredicted RBP12.77□□□□□ -0.36
SDCBP-204ENST00000447182 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.77□□□□□ -0.36
SDCBP-204ENST00000447182 NDUFC2-KCTD14E9PQ53 114 aa12.77□□□□□ -0.37
SDCBP-204ENST00000447182 Q6ZVQ6 151 aa12.77□□□□□ -0.37
SDCBP-204ENST00000447182 TRBV7-6A0A0J9YX20 115 aa12.76□□□□□ -0.37
SDCBP-204ENST00000447182 ZNF73O43830 326 aaPredicted RBP12.76□□□□□ -0.37
SDCBP-204ENST00000447182 XAGE1AQ9HD64 81 aa12.76□□□□□ -0.37
SDCBP-204ENST00000447182 ELOF1P60002 83 aaKnown RBP12.74□□□□□ -0.37
SDCBP-204ENST00000447182 TRBV7-4A0A0J9YYF1 115 aa12.74□□□□□ -0.37
SDCBP-204ENST00000447182 COX7BP24311 80 aa12.74□□□□□ -0.37
SDCBP-204ENST00000447182 CXCL6P80162 114 aa12.74□□□□□ -0.37
SDCBP-204ENST00000447182 UNC79Q9P2D8 2635 aa12.73□□□□□ -0.37
SDCBP-204ENST00000447182 TRAV7A0A075B6U4 112 aa12.71□□□□□ -0.37
SDCBP-204ENST00000447182 VPREB1P12018 145 aa12.71□□□□□ -0.37
SDCBP-204ENST00000447182 HAMPP81172 84 aa12.71□□□□□ -0.37
SDCBP-204ENST00000447182 EGFEM1PQ0D2K5 195 aa12.7□□□□□ -0.38
SDCBP-204ENST00000447182 KRTAP26-1Q6PEX3 210 aa12.69□□□□□ -0.38
SDCBP-204ENST00000447182 C20orf197Q8N268 126 aa12.68□□□□□ -0.38
SDCBP-204ENST00000447182 CAMK2N2Q96S95 79 aa12.68□□□□□ -0.38
SDCBP-204ENST00000447182 M0R378 163 aa12.68□□□□□ -0.38
SDCBP-204ENST00000447182 H3BNG1 76 aa12.67□□□□□ -0.38
SDCBP-204ENST00000447182 J3QKU1 62 aa12.67□□□□□ -0.38
SDCBP-204ENST00000447182 WIPF1O43516 503 aa12.67□□□□□ -0.38
SDCBP-204ENST00000447182 OXTP01178 125 aa12.66□□□□□ -0.38
SDCBP-204ENST00000447182 HIGD2BQ4VC39 106 aa12.65□□□□□ -0.38
SDCBP-204ENST00000447182 WFDC10BQ8IUB3 73 aa12.65□□□□□ -0.38
SDCBP-204ENST00000447182 NOTCH2Q04721 2471 aa12.65□□□□□ -0.38
SDCBP-204ENST00000447182 FASNP49327 2511 aaKnown RBP12.64□□□□□ -0.39
SDCBP-204ENST00000447182 Q6ZRU5 148 aa12.64□□□□□ -0.39
SDCBP-204ENST00000447182 LINC00528Q8N1L1 170 aa12.64□□□□□ -0.39
SDCBP-204ENST00000447182 TRAV10A0A0B4J240 114 aa12.63□□□□□ -0.39
SDCBP-204ENST00000447182 C15orf56Q8N910 161 aa12.63□□□□□ -0.39
SDCBP-204ENST00000447182 KLKP1Q107X0 134 aa12.62□□□□□ -0.39
SDCBP-204ENST00000447182 KPRPQ5T749 579 aaPredicted RBP12.62□□□□□ -0.39
SDCBP-204ENST00000447182 TENM1Q9UKZ4 2725 aa12.62□□□□□ -0.39
SDCBP-204ENST00000447182 INAFM1C9JVW0 142 aa12.61□□□□□ -0.39
SDCBP-204ENST00000447182 HELZ2Q9BYK8 2649 aaKnown RBP12.6□□□□□ -0.39
SDCBP-204ENST00000447182 HIVEP1P15822 2718 aa12.6□□□□□ -0.39
SDCBP-204ENST00000447182 H7BZZ5 65 aa12.6□□□□□ -0.39
SDCBP-204ENST00000447182 C5orf47Q569G3 176 aa12.6□□□□□ -0.39
SDCBP-204ENST00000447182 FAM236DA0A1B0GTK5 79 aa12.58□□□□□ -0.4
SDCBP-204ENST00000447182 F8WDY8 70 aa12.58□□□□□ -0.4
SDCBP-204ENST00000447182 FAM236CP0DP71 79 aa12.58□□□□□ -0.4
SDCBP-204ENST00000447182 Q6ZRP5 223 aa12.55□□□□□ -0.4
SDCBP-204ENST00000447182 NSD1Q96L73 2696 aaPredicted RBP12.55□□□□□ -0.4
SDCBP-204ENST00000447182 TRRAPQ9Y4A5 3859 aa12.54□□□□□ -0.4
SDCBP-204ENST00000447182 SCXQ7RTU7 201 aa12.54□□□□□ -0.4
SDCBP-204ENST00000447182 EPM2AB3EWF7 344 aa12.53□□□□□ -0.4
SDCBP-204ENST00000447182 C1orf43Q9BWL3 253 aa12.53□□□□□ -0.4
SDCBP-204ENST00000447182 ESRGQ1W209 222 aa12.53□□□□□ -0.4
SDCBP-204ENST00000447182 Q5XG85 94 aa12.52□□□□□ -0.4
SDCBP-204ENST00000447182 Q6ZTC4 211 aa12.52□□□□□ -0.4
SDCBP-204ENST00000447182 KCNQ1DNQ9H478 68 aa12.52□□□□□ -0.41
SDCBP-204ENST00000447182 LINC01556Q5JQF7 62 aa12.51□□□□□ -0.41
SDCBP-204ENST00000447182 TEP1Q99973 2627 aaKnown RBP12.51□□□□□ -0.41
SDCBP-204ENST00000447182 SERP1Q9Y6X1 66 aa12.5□□□□□ -0.41
SDCBP-204ENST00000447182 ATRQ13535 2644 aa12.5□□□□□ -0.41
SDCBP-204ENST00000447182 TM2D3Q9BRN9 247 aa12.5□□□□□ -0.41
SDCBP-204ENST00000447182 SYCNQ0VAF6 134 aa12.49□□□□□ -0.41
SDCBP-204ENST00000447182 RETNQ9HD89 108 aa12.49□□□□□ -0.41
SDCBP-204ENST00000447182 SNURFQ9Y675 71 aa12.49□□□□□ -0.41
SDCBP-204ENST00000447182 OTOGQ6ZRI0 2925 aa12.49□□□□□ -0.41
SDCBP-204ENST00000447182 RMI2Q96E14 147 aa12.49□□□□□ -0.41
SDCBP-204ENST00000447182 NDUFC1O43677 76 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms