RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 UNC79Q9P2D8 2635 aa9.69□□□□□ -0.86
ERCC3-203ENST00000445889 LAMTOR3Q9UHA4 124 aa9.69□□□□□ -0.86
ERCC3-203ENST00000445889 CD164L2Q6UWJ8 174 aa9.69□□□□□ -0.86
ERCC3-203ENST00000445889 XAGE1AQ9HD64 81 aa9.69□□□□□ -0.86
ERCC3-203ENST00000445889 TEP1Q99973 2627 aaKnown RBP9.68□□□□□ -0.86
ERCC3-203ENST00000445889 DPH3Q96FX2 82 aa9.68□□□□□ -0.86
ERCC3-203ENST00000445889 OTOGQ6ZRI0 2925 aa9.68□□□□□ -0.86
ERCC3-203ENST00000445889 LINC00167Q96N53 147 aa9.68□□□□□ -0.86
ERCC3-203ENST00000445889 UBL5Q9BZL1 73 aa9.67□□□□□ -0.86
ERCC3-203ENST00000445889 CELA1Q9UNI1 258 aa9.67□□□□□ -0.86
ERCC3-203ENST00000445889 KLK12Q9UKR0 248 aa9.66□□□□□ -0.86
ERCC3-203ENST00000445889 OXTP01178 125 aa9.66□□□□□ -0.86
ERCC3-203ENST00000445889 C20orf197Q8N268 126 aa9.66□□□□□ -0.86
ERCC3-203ENST00000445889 HIVEP1P15822 2718 aa9.65□□□□□ -0.86
ERCC3-203ENST00000445889 HAMPP81172 84 aa9.65□□□□□ -0.86
ERCC3-203ENST00000445889 RBM3P98179 157 aaKnown RBP9.65□□□□□ -0.86
ERCC3-203ENST00000445889 CYSRT1A8MQ03 144 aa9.65□□□□□ -0.87
ERCC3-203ENST00000445889 NDUFC2O95298 119 aa9.65□□□□□ -0.87
ERCC3-203ENST00000445889 TMEM258P61165 79 aa9.65□□□□□ -0.87
ERCC3-203ENST00000445889 LINC00575Q6W349 94 aa9.65□□□□□ -0.87
ERCC3-203ENST00000445889 SPAG11BQ08648 103 aa9.64□□□□□ -0.87
ERCC3-203ENST00000445889 LINC00612Q8N6U2 182 aa9.64□□□□□ -0.87
ERCC3-203ENST00000445889 C16orf95Q9H693 158 aa9.64□□□□□ -0.87
ERCC3-203ENST00000445889 IGHV4-28A0A0C4DH34 117 aa9.63□□□□□ -0.87
ERCC3-203ENST00000445889 SMIM9A6NGZ8 99 aa9.63□□□□□ -0.87
ERCC3-203ENST00000445889 DAD1P61803 113 aa9.63□□□□□ -0.87
ERCC3-203ENST00000445889 COX17Q14061 63 aa9.63□□□□□ -0.87
ERCC3-203ENST00000445889 Q6ZQY7 126 aa9.63□□□□□ -0.87
ERCC3-203ENST00000445889 SCXQ7RTU7 201 aa9.62□□□□□ -0.87
ERCC3-203ENST00000445889 Q6ZQT0 140 aa9.61□□□□□ -0.87
ERCC3-203ENST00000445889 RPS28P62857 69 aaKnown RBP9.61□□□□□ -0.87
ERCC3-203ENST00000445889 TRBV10-3A0A0K0K1G6 114 aa9.59□□□□□ -0.87
ERCC3-203ENST00000445889 HIGD2BQ4VC39 106 aa9.59□□□□□ -0.87
ERCC3-203ENST00000445889 ATP5EP2Q5VTU8 51 aa9.59□□□□□ -0.87
ERCC3-203ENST00000445889 C4orf26Q17RF5 130 aa9.58□□□□□ -0.88
ERCC3-203ENST00000445889 LYPD5Q6UWN5 251 aa9.58□□□□□ -0.88
ERCC3-203ENST00000445889 ZNF561-AS1K7EIQ3 104 aa9.58□□□□□ -0.88
ERCC3-203ENST00000445889 LINC01547P58512 204 aaPredicted RBP9.58□□□□□ -0.88
ERCC3-203ENST00000445889 TRAV10A0A0B4J240 114 aa9.57□□□□□ -0.88
ERCC3-203ENST00000445889 Q6ZVQ6 151 aa9.57□□□□□ -0.88
ERCC3-203ENST00000445889 SNURFQ9Y675 71 aa9.56□□□□□ -0.88
ERCC3-203ENST00000445889 C5orf47Q569G3 176 aa9.55□□□□□ -0.88
ERCC3-203ENST00000445889 LYRM9A8MSI8 78 aa9.55□□□□□ -0.88
ERCC3-203ENST00000445889 C6orf48Q9UBA6 75 aa9.55□□□□□ -0.88
ERCC3-203ENST00000445889 IGLV6-57P01721 117 aa9.54□□□□□ -0.88
ERCC3-203ENST00000445889 HRCT1Q6UXD1 115 aa9.53□□□□□ -0.88
ERCC3-203ENST00000445889 LOC110117498A0A087WWA1 95 aa9.52□□□□□ -0.89
ERCC3-203ENST00000445889 Q8NAQ8 132 aa9.52□□□□□ -0.89
ERCC3-203ENST00000445889 Q8N9L7 120 aa9.51□□□□□ -0.89
ERCC3-203ENST00000445889 MUC7Q8TAX7 377 aa9.51□□□□□ -0.89
ERCC3-203ENST00000445889 DIRC1Q969H9 104 aa9.51□□□□□ -0.89
ERCC3-203ENST00000445889 A0A0J9YWU9 116 aa9.5□□□□□ -0.89
ERCC3-203ENST00000445889 IGHV4-30-4P0DP06 118 aa9.5□□□□□ -0.89
ERCC3-203ENST00000445889 WFDC10BQ8IUB3 73 aa9.5□□□□□ -0.89
ERCC3-203ENST00000445889 RMI2Q96E14 147 aa9.5□□□□□ -0.89
ERCC3-203ENST00000445889 ZNF73O43830 326 aaPredicted RBP9.49□□□□□ -0.89
ERCC3-203ENST00000445889 LELP1Q5T871 98 aa9.49□□□□□ -0.89
ERCC3-203ENST00000445889 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.49□□□□□ -0.89
ERCC3-203ENST00000445889 F8P00451 2351 aa9.49□□□□□ -0.89
ERCC3-203ENST00000445889 Q5XG85 94 aa9.49□□□□□ -0.89
ERCC3-203ENST00000445889 FAM236DA0A1B0GTK5 79 aa9.49□□□□□ -0.89
ERCC3-203ENST00000445889 SPART-AS1P0CW21 52 aa9.49□□□□□ -0.89
ERCC3-203ENST00000445889 FAM236CP0DP71 79 aa9.49□□□□□ -0.89
ERCC3-203ENST00000445889 H7BZZ5 65 aa9.48□□□□□ -0.89
ERCC3-203ENST00000445889 RETNQ9HD89 108 aa9.48□□□□□ -0.89
ERCC3-203ENST00000445889 TRAV7A0A075B6U4 112 aa9.48□□□□□ -0.89
ERCC3-203ENST00000445889 CAMK2N2Q96S95 79 aa9.48□□□□□ -0.89
ERCC3-203ENST00000445889 NSD1Q96L73 2696 aaPredicted RBP9.48□□□□□ -0.89
ERCC3-203ENST00000445889 TENM3Q9P273 2699 aa9.47□□□□□ -0.89
ERCC3-203ENST00000445889 INAFM1C9JVW0 142 aa9.47□□□□□ -0.89
ERCC3-203ENST00000445889 COX7BP24311 80 aa9.47□□□□□ -0.89
ERCC3-203ENST00000445889 APOC4P55056 127 aa9.47□□□□□ -0.89
ERCC3-203ENST00000445889 C9orf66Q5T8R8 295 aa9.47□□□□□ -0.89
ERCC3-203ENST00000445889 TM2D3Q9BRN9 247 aa9.47□□□□□ -0.89
ERCC3-203ENST00000445889 PRR34Q9NV39 138 aa9.46□□□□□ -0.89
ERCC3-203ENST00000445889 Q6ZRU5 148 aa9.45□□□□□ -0.9
ERCC3-203ENST00000445889 DEFB105AQ8NG35 78 aa9.45□□□□□ -0.9
ERCC3-203ENST00000445889 F8WEM9 126 aa9.44□□□□□ -0.9
ERCC3-203ENST00000445889 NDUFC2-KCTD14E9PQ53 114 aa9.43□□□□□ -0.9
ERCC3-203ENST00000445889 ANK2Q01484 3957 aa9.43□□□□□ -0.9
ERCC3-203ENST00000445889 TRBV7-4A0A0J9YYF1 115 aa9.42□□□□□ -0.9
ERCC3-203ENST00000445889 BAHCC1Q9P281 2608 aa9.42□□□□□ -0.9
ERCC3-203ENST00000445889 MIFP14174 115 aa9.42□□□□□ -0.9
ERCC3-203ENST00000445889 PDE6GP18545 87 aa9.42□□□□□ -0.9
ERCC3-203ENST00000445889 CXCL6P80162 114 aa9.42□□□□□ -0.9
ERCC3-203ENST00000445889 MAST4O15021 2626 aa9.42□□□□□ -0.9
ERCC3-203ENST00000445889 C3orf84H3BNL1 204 aa9.42□□□□□ -0.9
ERCC3-203ENST00000445889 VPREB1P12018 145 aa9.42□□□□□ -0.9
ERCC3-203ENST00000445889 ELOF1P60002 83 aaKnown RBP9.42□□□□□ -0.9
ERCC3-203ENST00000445889 FBN1P35555 2871 aaKnown RBP9.41□□□□□ -0.9
ERCC3-203ENST00000445889 FLNBO75369 2602 aaKnown RBP9.4□□□□□ -0.9
ERCC3-203ENST00000445889 KPRPQ5T749 579 aaPredicted RBP9.4□□□□□ -0.9
ERCC3-203ENST00000445889 KLKP1Q107X0 134 aa9.39□□□□□ -0.91
ERCC3-203ENST00000445889 Q6ZRP5 223 aa9.39□□□□□ -0.91
ERCC3-203ENST00000445889 NOTCH1P46531 2555 aa9.39□□□□□ -0.91
ERCC3-203ENST00000445889 GVQW2A0A096LPI5 108 aaPredicted RBP9.39□□□□□ -0.91
ERCC3-203ENST00000445889 OXLD1Q5BKU9 147 aa9.39□□□□□ -0.91
ERCC3-203ENST00000445889 Q6ZTC4 211 aa9.39□□□□□ -0.91
ERCC3-203ENST00000445889 BPY2O14599 106 aa9.38□□□□□ -0.91
ERCC3-203ENST00000445889 IGKV2D-24A0A075B6R9 120 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms