RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 COX17Q14061 63 aa13.15□□□□□ -0.3
NUP50-211ENST00000445721 KIAA1644Q3SXP7 199 aa13.15□□□□□ -0.3
NUP50-211ENST00000445721 IGLV5-39A0A0G2JS06 123 aa13.14□□□□□ -0.31
NUP50-211ENST00000445721 XP32Q5T750 250 aa13.14□□□□□ -0.31
NUP50-211ENST00000445721 MT1HP80294 61 aa13.13□□□□□ -0.31
NUP50-211ENST00000445721 MT-ND4LP03901 98 aa13.12□□□□□ -0.31
NUP50-211ENST00000445721 ANAPC16Q96DE5 110 aa13.12□□□□□ -0.31
NUP50-211ENST00000445721 LINC01549A6NIU2 74 aa13.11□□□□□ -0.31
NUP50-211ENST00000445721 KRTAP19-2Q3LHN2 52 aa13.11□□□□□ -0.31
NUP50-211ENST00000445721 Q8N377 158 aa13.11□□□□□ -0.31
NUP50-211ENST00000445721 FAM19A2Q8N3H0 131 aa13.11□□□□□ -0.31
NUP50-211ENST00000445721 SMCR5Q8TEV8 140 aa13.11□□□□□ -0.31
NUP50-211ENST00000445721 CFC1BP0CG36 223 aa13.1□□□□□ -0.31
NUP50-211ENST00000445721 SLC25A20O43772 301 aa13.07□□□□□ -0.32
NUP50-211ENST00000445721 IGLC3P0DOY3 106 aa13.07□□□□□ -0.32
NUP50-211ENST00000445721 ZNF22P17026 224 aaPredicted RBP13.06□□□□□ -0.32
NUP50-211ENST00000445721 MOBPQ13875 183 aa13.06□□□□□ -0.32
NUP50-211ENST00000445721 NDUFA6P56556 154 aa13.05□□□□□ -0.32
NUP50-211ENST00000445721 RPS29P62273 56 aaKnown RBP13.05□□□□□ -0.32
NUP50-211ENST00000445721 LINC00483Q53H64 154 aa13.05□□□□□ -0.32
NUP50-211ENST00000445721 GAGE2AQ6NT46 116 aa13.05□□□□□ -0.32
NUP50-211ENST00000445721 IGLV9-49A0A0B4J1Y8 123 aa13.04□□□□□ -0.32
NUP50-211ENST00000445721 LINC01546A6NGU7 62 aa13.04□□□□□ -0.32
NUP50-211ENST00000445721 PRYO14603 147 aa13.04□□□□□ -0.32
NUP50-211ENST00000445721 LINC00158P58513 81 aa13.04□□□□□ -0.32
NUP50-211ENST00000445721 ETDCA0A1B0GVM5 59 aa13.02□□□□□ -0.33
NUP50-211ENST00000445721 A0A0U1RRA0 63 aa13.01□□□□□ -0.33
NUP50-211ENST00000445721 SSBP3-AS1Q7Z2R9 100 aa13.01□□□□□ -0.33
NUP50-211ENST00000445721 LORP23490 312 aaPredicted RBP13□□□□□ -0.33
NUP50-211ENST00000445721 SPRR1AP35321 89 aa13□□□□□ -0.33
NUP50-211ENST00000445721 SFTA2Q6UW10 78 aa12.99□□□□□ -0.33
NUP50-211ENST00000445721 KCNQ1DNQ9H478 68 aa12.99□□□□□ -0.33
NUP50-211ENST00000445721 KRTAP4-16G5E9R7 235 aaPredicted RBP12.98□□□□□ -0.33
NUP50-211ENST00000445721 KRTAP10-6P60371 365 aaPredicted RBP12.98□□□□□ -0.33
NUP50-211ENST00000445721 FA2HQ7L5A8 372 aa12.98□□□□□ -0.33
NUP50-211ENST00000445721 NCR3O14931 201 aa12.97□□□□□ -0.33
NUP50-211ENST00000445721 PCOTHQ58A44 107 aa12.97□□□□□ -0.33
NUP50-211ENST00000445721 SMCO4Q9NRQ5 59 aa12.97□□□□□ -0.33
NUP50-211ENST00000445721 IGLV8-61A0A075B6I0 122 aa12.96□□□□□ -0.33
NUP50-211ENST00000445721 BOD1L2Q8IYS8 172 aa12.96□□□□□ -0.33
NUP50-211ENST00000445721 ERC2-IT1O76042 136 aa12.94□□□□□ -0.34
NUP50-211ENST00000445721 TMEM170BQ5T4T1 132 aa12.94□□□□□ -0.34
NUP50-211ENST00000445721 C11orf86A6NJI1 115 aa12.92□□□□□ -0.34
NUP50-211ENST00000445721 ATP6V1G1O75348 118 aa12.92□□□□□ -0.34
NUP50-211ENST00000445721 TRBV10-3A0A0K0K1G6 114 aa12.91□□□□□ -0.34
NUP50-211ENST00000445721 B5MCH6 92 aa12.89□□□□□ -0.35
NUP50-211ENST00000445721 SMIM13P0DJ93 91 aa12.89□□□□□ -0.35
NUP50-211ENST00000445721 M0R2T5 61 aa12.88□□□□□ -0.35
NUP50-211ENST00000445721 A0A096LNJ9 63 aa12.87□□□□□ -0.35
NUP50-211ENST00000445721 BAGE3Q86Y29 109 aa12.87□□□□□ -0.35
NUP50-211ENST00000445721 TRAV9-1A0A075B6T8 112 aa12.86□□□□□ -0.35
NUP50-211ENST00000445721 S100A12P80511 92 aa12.86□□□□□ -0.35
NUP50-211ENST00000445721 C9orf153Q5TBE3 101 aa12.86□□□□□ -0.35
NUP50-211ENST00000445721 MIR7-3HGQ8N6C7 128 aa12.85□□□□□ -0.35
NUP50-211ENST00000445721 C9orf92A6NGG3 77 aa12.84□□□□□ -0.35
NUP50-211ENST00000445721 MEIG1Q5JSS6 88 aa12.84□□□□□ -0.35
NUP50-211ENST00000445721 Q9BRP9 147 aa12.84□□□□□ -0.35
NUP50-211ENST00000445721 FABP9Q0Z7S8 132 aa12.83□□□□□ -0.36
NUP50-211ENST00000445721 PMCHL1Q16048 86 aa12.81□□□□□ -0.36
NUP50-211ENST00000445721 HBDP02042 147 aa12.8□□□□□ -0.36
NUP50-211ENST00000445721 TMEM223A0PJW6 202 aa12.78□□□□□ -0.36
NUP50-211ENST00000445721 Q6ZRX8 168 aa12.78□□□□□ -0.36
NUP50-211ENST00000445721 KRTAP9-7A8MTY7 169 aa12.77□□□□□ -0.37
NUP50-211ENST00000445721 S100PP25815 95 aa12.77□□□□□ -0.37
NUP50-211ENST00000445721 DDTP30046 118 aa12.77□□□□□ -0.37
NUP50-211ENST00000445721 URB1-AS1Q96HZ7 61 aa12.77□□□□□ -0.37
NUP50-211ENST00000445721 CHTOPQ9Y3Y2 248 aaKnown RBP12.77□□□□□ -0.37
NUP50-211ENST00000445721 LINC00614P0C842 121 aa12.76□□□□□ -0.37
NUP50-211ENST00000445721 COX19Q49B96 90 aa12.74□□□□□ -0.37
NUP50-211ENST00000445721 COX6B2Q6YFQ2 88 aa12.74□□□□□ -0.37
NUP50-211ENST00000445721 HERV-K104P63124 156 aa12.73□□□□□ -0.37
NUP50-211ENST00000445721 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.72□□□□□ -0.37
NUP50-211ENST00000445721 LINC00587B1AMM8 73 aa12.72□□□□□ -0.37
NUP50-211ENST00000445721 HRCT1Q6UXD1 115 aa12.72□□□□□ -0.37
NUP50-211ENST00000445721 LIMD2Q9BT23 127 aa12.72□□□□□ -0.37
NUP50-211ENST00000445721 SEC11CQ9BY50 192 aa12.72□□□□□ -0.37
NUP50-211ENST00000445721 FLGP20930 4061 aaPredicted RBP12.72□□□□□ -0.37
NUP50-211ENST00000445721 MAP1LC3CQ9BXW4 147 aa12.71□□□□□ -0.37
NUP50-211ENST00000445721 ST20-AS1Q8NBB2 130 aa12.7□□□□□ -0.38
NUP50-211ENST00000445721 C18orf32Q8TCD1 76 aa12.7□□□□□ -0.38
NUP50-211ENST00000445721 TRBV10-2A0A0K0K1G8 114 aa12.69□□□□□ -0.38
NUP50-211ENST00000445721 IGLV6-57P01721 117 aa12.69□□□□□ -0.38
NUP50-211ENST00000445721 JOSD1Q15040 202 aaPredicted RBP12.69□□□□□ -0.38
NUP50-211ENST00000445721 MYMXA0A1B0GTQ4 84 aa12.65□□□□□ -0.38
NUP50-211ENST00000445721 S100A7L2Q5SY68 101 aa12.65□□□□□ -0.38
NUP50-211ENST00000445721 LOC107984156A0A0G2JMH3 177 aa12.64□□□□□ -0.39
NUP50-211ENST00000445721 ARL17AQ8IVW1 177 aa12.64□□□□□ -0.39
NUP50-211ENST00000445721 SPANXB1Q9NS25 103 aaPredicted RBP12.63□□□□□ -0.39
NUP50-211ENST00000445721 TRAV12-1A0A0B4J245 112 aa12.62□□□□□ -0.39
NUP50-211ENST00000445721 TRAV23DV6A0A075B6W5 121 aa12.61□□□□□ -0.39
NUP50-211ENST00000445721 TMEM218A2RU14 115 aa12.61□□□□□ -0.39
NUP50-211ENST00000445721 TRAPPC1Q9Y5R8 145 aa12.6□□□□□ -0.39
NUP50-211ENST00000445721 IFI27L1Q96BM0 104 aa12.59□□□□□ -0.39
NUP50-211ENST00000445721 C5orf52A6NGY3 159 aa12.58□□□□□ -0.4
NUP50-211ENST00000445721 ZNF73O43830 326 aaPredicted RBP12.58□□□□□ -0.4
NUP50-211ENST00000445721 MIEN1Q9BRT3 115 aa12.57□□□□□ -0.4
NUP50-211ENST00000445721 SLC25A34Q6PIV7 304 aa12.56□□□□□ -0.4
NUP50-211ENST00000445721 TSPEAR-AS2P59090 65 aa12.55□□□□□ -0.4
NUP50-211ENST00000445721 RPL37P61927 97 aaKnown RBP12.55□□□□□ -0.4
NUP50-211ENST00000445721 RPS10P5Q9NQ39 176 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms