RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 MUC17Q685J3 4493 aa8.2□□□□□ -1.1
SMARCAL1-210ENST00000445153 IGKV2-28A0A075B6P5 120 aa8.19□□□□□ -1.1
SMARCAL1-210ENST00000445153 IGKV2D-28P01615 120 aa8.19□□□□□ -1.1
SMARCAL1-210ENST00000445153 UBE2AP49459 152 aa8.19□□□□□ -1.1
SMARCAL1-210ENST00000445153 LINC00304Q8N9R0 145 aa8.19□□□□□ -1.1
SMARCAL1-210ENST00000445153 ZNF625Q96I27 306 aaPredicted RBP8.19□□□□□ -1.1
SMARCAL1-210ENST00000445153 TMEM238C9JI98 176 aa8.18□□□□□ -1.1
SMARCAL1-210ENST00000445153 H3BRM9 83 aa8.18□□□□□ -1.1
SMARCAL1-210ENST00000445153 SERF1AO75920 110 aa8.18□□□□□ -1.1
SMARCAL1-210ENST00000445153 PRLHP81277 87 aa8.18□□□□□ -1.1
SMARCAL1-210ENST00000445153 FAM229BQ4G0N7 80 aa8.18□□□□□ -1.1
SMARCAL1-210ENST00000445153 HSPB8Q9UJY1 196 aa8.18□□□□□ -1.1
SMARCAL1-210ENST00000445153 ERG28Q9UKR5 140 aa8.18□□□□□ -1.1
SMARCAL1-210ENST00000445153 HIST1H2BKO60814 126 aa8.17□□□□□ -1.1
SMARCAL1-210ENST00000445153 LEPROTL1O95214 131 aa8.17□□□□□ -1.1
SMARCAL1-210ENST00000445153 HIST1H2BJP06899 126 aa8.17□□□□□ -1.1
SMARCAL1-210ENST00000445153 HIST1H2BOP23527 126 aa8.17□□□□□ -1.1
SMARCAL1-210ENST00000445153 HIST1H2BBP33778 126 aa8.17□□□□□ -1.1
SMARCAL1-210ENST00000445153 HIST1H2BDP58876 126 aa8.17□□□□□ -1.1
SMARCAL1-210ENST00000445153 HIST1H2BCP62807 126 aa8.17□□□□□ -1.1
SMARCAL1-210ENST00000445153 HIST2H2BEQ16778 126 aa8.17□□□□□ -1.1
SMARCAL1-210ENST00000445153 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.17□□□□□ -1.1
SMARCAL1-210ENST00000445153 NKAPP1Q8N9T2 125 aa8.17□□□□□ -1.1
SMARCAL1-210ENST00000445153 HIST1H2BHQ93079 126 aa8.17□□□□□ -1.1
SMARCAL1-210ENST00000445153 HIST1H2BNQ99877 126 aa8.17□□□□□ -1.1
SMARCAL1-210ENST00000445153 HIST1H2BMQ99879 126 aa8.17□□□□□ -1.1
SMARCAL1-210ENST00000445153 IFI27L1Q96BM0 104 aa8.16□□□□□ -1.1
SMARCAL1-210ENST00000445153 IGLV7-46A0A075B6I9 117 aa8.15□□□□□ -1.1
SMARCAL1-210ENST00000445153 TPRXLQ17RH7 258 aa8.15□□□□□ -1.1
SMARCAL1-210ENST00000445153 IGKV2D-26A0A0A0MRZ7 120 aa8.14□□□□□ -1.11
SMARCAL1-210ENST00000445153 M0R378 163 aa8.14□□□□□ -1.11
SMARCAL1-210ENST00000445153 FAM19A2Q8N3H0 131 aa8.14□□□□□ -1.11
SMARCAL1-210ENST00000445153 C3orf22Q8N5N4 141 aa8.14□□□□□ -1.11
SMARCAL1-210ENST00000445153 TMEM126AQ9H061 195 aa8.14□□□□□ -1.11
SMARCAL1-210ENST00000445153 CDIP1Q9H305 208 aa8.14□□□□□ -1.11
SMARCAL1-210ENST00000445153 TMEM170BQ5T4T1 132 aa8.13□□□□□ -1.11
SMARCAL1-210ENST00000445153 FAM19A1Q7Z5A9 133 aa8.13□□□□□ -1.11
SMARCAL1-210ENST00000445153 PLEKHB2Q96CS7 222 aa8.13□□□□□ -1.11
SMARCAL1-210ENST00000445153 S100A6P06703 90 aa8.12□□□□□ -1.11
SMARCAL1-210ENST00000445153 MAP1LC3CQ9BXW4 147 aa8.12□□□□□ -1.11
SMARCAL1-210ENST00000445153 TRAV12-1A0A0B4J245 112 aa8.11□□□□□ -1.11
SMARCAL1-210ENST00000445153 A0A0U1RRA0 63 aa8.11□□□□□ -1.11
SMARCAL1-210ENST00000445153 KRTAP9-6A0A140TA67 174 aa8.11□□□□□ -1.11
SMARCAL1-210ENST00000445153 TMEM223A0PJW6 202 aa8.11□□□□□ -1.11
SMARCAL1-210ENST00000445153 H0Y8G0 127 aa8.11□□□□□ -1.11
SMARCAL1-210ENST00000445153 COX17Q14061 63 aa8.11□□□□□ -1.11
SMARCAL1-210ENST00000445153 CHTOPQ9Y3Y2 248 aaKnown RBP8.11□□□□□ -1.11
SMARCAL1-210ENST00000445153 FABP4P15090 132 aa8.1□□□□□ -1.11
SMARCAL1-210ENST00000445153 LINC00310P59036 64 aa8.1□□□□□ -1.11
SMARCAL1-210ENST00000445153 COA6Q5JTJ3 125 aaKnown RBP8.09□□□□□ -1.11
SMARCAL1-210ENST00000445153 PPDPFQ9H3Y8 114 aa8.09□□□□□ -1.11
SMARCAL1-210ENST00000445153 PLNP26678 52 aa8.08□□□□□ -1.12
SMARCAL1-210ENST00000445153 S100A2P29034 98 aa8.08□□□□□ -1.12
SMARCAL1-210ENST00000445153 SMIM13P0DJ93 91 aa8.07□□□□□ -1.12
SMARCAL1-210ENST00000445153 LINC00158P58513 81 aa8.07□□□□□ -1.12
SMARCAL1-210ENST00000445153 CTAG1AP78358 180 aa8.07□□□□□ -1.12
SMARCAL1-210ENST00000445153 TSPEAR-AS2P59090 65 aa8.06□□□□□ -1.12
SMARCAL1-210ENST00000445153 RPL24P83731 157 aaKnown RBP8.06□□□□□ -1.12
SMARCAL1-210ENST00000445153 HIGD2AQ9BW72 106 aa8.06□□□□□ -1.12
SMARCAL1-210ENST00000445153 C20orf202A1L168 122 aa8.05□□□□□ -1.12
SMARCAL1-210ENST00000445153 AKR1D1P51857 326 aa8.05□□□□□ -1.12
SMARCAL1-210ENST00000445153 HERVK_113P61574 105 aa8.05□□□□□ -1.12
SMARCAL1-210ENST00000445153 SFTA2Q6UW10 78 aa8.05□□□□□ -1.12
SMARCAL1-210ENST00000445153 DPM2O94777 84 aa8.04□□□□□ -1.12
SMARCAL1-210ENST00000445153 SPRR4Q96PI1 79 aa8.04□□□□□ -1.12
SMARCAL1-210ENST00000445153 MIR7-3HGQ8N6C7 128 aa8.03□□□□□ -1.12
SMARCAL1-210ENST00000445153 DAND5Q8N907 189 aa8.03□□□□□ -1.12
SMARCAL1-210ENST00000445153 KRTAP4-1Q9BYQ7 146 aa8.03□□□□□ -1.12
SMARCAL1-210ENST00000445153 KRTAP4-16G5E9R7 235 aaPredicted RBP8.02□□□□□ -1.13
SMARCAL1-210ENST00000445153 SYS1-DBNDD2H3BUS1 97 aa8.02□□□□□ -1.13
SMARCAL1-210ENST00000445153 IGKCP01834 107 aa8.02□□□□□ -1.13
SMARCAL1-210ENST00000445153 SPRR1AP35321 89 aa8.02□□□□□ -1.13
SMARCAL1-210ENST00000445153 PET117Q6UWS5 81 aa8.02□□□□□ -1.13
SMARCAL1-210ENST00000445153 NCR3O14931 201 aa8.01□□□□□ -1.13
SMARCAL1-210ENST00000445153 KRTDAPP60985 99 aa8.01□□□□□ -1.13
SMARCAL1-210ENST00000445153 KRTAP13-3Q3SY46 172 aa8.01□□□□□ -1.13
SMARCAL1-210ENST00000445153 LCE2DQ5TA82 110 aaPredicted RBP8.01□□□□□ -1.13
SMARCAL1-210ENST00000445153 SPAG11AQ6PDA7 123 aa8.01□□□□□ -1.13
SMARCAL1-210ENST00000445153 BOD1L2Q8IYS8 172 aa8.01□□□□□ -1.13
SMARCAL1-210ENST00000445153 NDUFA12Q9UI09 145 aa8□□□□□ -1.13
SMARCAL1-210ENST00000445153 TRBV10-3A0A0K0K1G6 114 aa7.99□□□□□ -1.13
SMARCAL1-210ENST00000445153 MEIG1Q5JSS6 88 aa7.99□□□□□ -1.13
SMARCAL1-210ENST00000445153 Q8NBF4 154 aa7.99□□□□□ -1.13
SMARCAL1-210ENST00000445153 FP248Q71RG6 208 aaPredicted RBP7.98□□□□□ -1.13
SMARCAL1-210ENST00000445153 SMCR5Q8TEV8 140 aa7.98□□□□□ -1.13
SMARCAL1-210ENST00000445153 PMCHL2Q9BQD1 86 aa7.98□□□□□ -1.13
SMARCAL1-210ENST00000445153 KCNQ1DNQ9H478 68 aa7.98□□□□□ -1.13
SMARCAL1-210ENST00000445153 PRYO14603 147 aa7.97□□□□□ -1.13
SMARCAL1-210ENST00000445153 EIF4EBP3O60516 100 aaPredicted RBP7.97□□□□□ -1.13
SMARCAL1-210ENST00000445153 C3orf79P0CE67 100 aa7.97□□□□□ -1.13
SMARCAL1-210ENST00000445153 ASB16-AS1Q495Z4 193 aa7.97□□□□□ -1.13
SMARCAL1-210ENST00000445153 HIST3H2BBQ8N257 126 aa7.97□□□□□ -1.13
SMARCAL1-210ENST00000445153 ERC2-IT1O76042 136 aa7.96□□□□□ -1.14
SMARCAL1-210ENST00000445153 HERV-K104P63124 156 aa7.96□□□□□ -1.14
SMARCAL1-210ENST00000445153 C4orf48Q5BLP8 95 aa7.96□□□□□ -1.14
SMARCAL1-210ENST00000445153 LINC01545Q5VT33 79 aa7.96□□□□□ -1.14
SMARCAL1-210ENST00000445153 LINC00337Q8N6G1 96 aa7.96□□□□□ -1.14
SMARCAL1-210ENST00000445153 LINC00587B1AMM8 73 aa7.95□□□□□ -1.14
SMARCAL1-210ENST00000445153 LGALS3P17931 250 aaKnown RBP7.95□□□□□ -1.14
SMARCAL1-210ENST00000445153 SNRPEP62304 92 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms