RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 JOSD1Q15040 202 aaPredicted RBP11.2□□□□□ -0.62
CIRBP-203ENST00000444172 PCP2Q8IVA1 136 aa11.2□□□□□ -0.62
CIRBP-203ENST00000444172 C22orf24Q9Y442 160 aa11.2□□□□□ -0.62
CIRBP-203ENST00000444172 PLA2G1BP04054 148 aaKnown RBP11.19□□□□□ -0.62
CIRBP-203ENST00000444172 RPL37AP61513 92 aaKnown RBP11.19□□□□□ -0.62
CIRBP-203ENST00000444172 PLA2G2DQ9UNK4 145 aa11.19□□□□□ -0.62
CIRBP-203ENST00000444172 UBE2BP63146 152 aa11.18□□□□□ -0.62
CIRBP-203ENST00000444172 SCGB1D4Q6XE38 83 aa11.18□□□□□ -0.62
CIRBP-203ENST00000444172 NKAPP1Q8N9T2 125 aa11.18□□□□□ -0.62
CIRBP-203ENST00000444172 RPL24P83731 157 aaKnown RBP11.17□□□□□ -0.62
CIRBP-203ENST00000444172 ADAMTSL4-AS1Q5T5F5 129 aa11.17□□□□□ -0.62
CIRBP-203ENST00000444172 NPC2P61916 151 aa11.16□□□□□ -0.62
CIRBP-203ENST00000444172 LBHQ53QV2 105 aaPredicted RBP11.16□□□□□ -0.62
CIRBP-203ENST00000444172 KRTAP4-5Q9BYR2 181 aa11.16□□□□□ -0.62
CIRBP-203ENST00000444172 MRPL55Q7Z7F7 128 aaKnown RBP11.15□□□□□ -0.62
CIRBP-203ENST00000444172 BOD1L2Q8IYS8 172 aa11.15□□□□□ -0.62
CIRBP-203ENST00000444172 MIEN1Q9BRT3 115 aa11.15□□□□□ -0.62
CIRBP-203ENST00000444172 GAGE10A6NGK3 116 aa11.14□□□□□ -0.63
CIRBP-203ENST00000444172 TIMM17BO60830 172 aa11.14□□□□□ -0.63
CIRBP-203ENST00000444172 VPREB1P12018 145 aa11.14□□□□□ -0.63
CIRBP-203ENST00000444172 TP73-AS1Q9UF72 201 aa11.14□□□□□ -0.63
CIRBP-203ENST00000444172 PAM16Q9Y3D7 125 aa11.14□□□□□ -0.63
CIRBP-203ENST00000444172 IGLV5-37A0A075B6J1 123 aa11.13□□□□□ -0.63
CIRBP-203ENST00000444172 PYY3Q5JQD4 70 aa11.13□□□□□ -0.63
CIRBP-203ENST00000444172 Q8NDZ9 215 aa11.13□□□□□ -0.63
CIRBP-203ENST00000444172 LINC00167Q96N53 147 aa11.13□□□□□ -0.63
CIRBP-203ENST00000444172 VAMP8Q9BV40 100 aa11.13□□□□□ -0.63
CIRBP-203ENST00000444172 SPATA45Q537H7 98 aa11.12□□□□□ -0.63
CIRBP-203ENST00000444172 LITAFQ99732 161 aa11.12□□□□□ -0.63
CIRBP-203ENST00000444172 HERC2O95714 4834 aa11.11□□□□□ -0.63
CIRBP-203ENST00000444172 RPL37AP8A6NKH3 93 aa11.11□□□□□ -0.63
CIRBP-203ENST00000444172 PRR3P79522 188 aaKnown RBP11.11□□□□□ -0.63
CIRBP-203ENST00000444172 KRTAP11-1Q8IUC1 163 aa11.11□□□□□ -0.63
CIRBP-203ENST00000444172 PSORS1C2Q9UIG4 136 aa11.11□□□□□ -0.63
CIRBP-203ENST00000444172 TMEM238C9JI98 176 aa11.1□□□□□ -0.63
CIRBP-203ENST00000444172 LOC107984156A0A0G2JMH3 177 aa11.09□□□□□ -0.63
CIRBP-203ENST00000444172 NCR3O14931 201 aa11.09□□□□□ -0.63
CIRBP-203ENST00000444172 KRTAP10-4P60372 401 aaPredicted RBP11.09□□□□□ -0.63
CIRBP-203ENST00000444172 C1orf137Q5JT78 98 aa11.09□□□□□ -0.63
CIRBP-203ENST00000444172 SOSTDC1Q6X4U4 206 aa11.09□□□□□ -0.63
CIRBP-203ENST00000444172 ARL17AQ8IVW1 177 aa11.09□□□□□ -0.63
CIRBP-203ENST00000444172 LINC00308Q8TCZ7 52 aa11.09□□□□□ -0.63
CIRBP-203ENST00000444172 FAT1Q14517 4588 aa11.08□□□□□ -0.64
CIRBP-203ENST00000444172 M0R378 163 aa11.08□□□□□ -0.64
CIRBP-203ENST00000444172 COX8AP10176 69 aa11.08□□□□□ -0.64
CIRBP-203ENST00000444172 C14orf144Q96I85 54 aa11.08□□□□□ -0.64
CIRBP-203ENST00000444172 IGKV2-28A0A075B6P5 120 aa11.07□□□□□ -0.64
CIRBP-203ENST00000444172 EIF4EBP3O60516 100 aaPredicted RBP11.07□□□□□ -0.64
CIRBP-203ENST00000444172 IGKV2D-28P01615 120 aa11.07□□□□□ -0.64
CIRBP-203ENST00000444172 SPANXDQ9BXN6 97 aa11.07□□□□□ -0.64
CIRBP-203ENST00000444172 SPANXCQ9NY87 97 aa11.07□□□□□ -0.64
CIRBP-203ENST00000444172 INAFM2P0DMQ5 153 aa11.06□□□□□ -0.64
CIRBP-203ENST00000444172 IGLV1-50A0A075B6I6 118 aa11.04□□□□□ -0.64
CIRBP-203ENST00000444172 NDUFC2O95298 119 aa11.04□□□□□ -0.64
CIRBP-203ENST00000444172 SRSF9Q13242 221 aaKnown RBP eCLIP11.04□□□□□ -0.643e-7■■□□□ 13.7
CIRBP-203ENST00000444172 Q6ZVH6 145 aa11.03□□□□□ -0.64
CIRBP-203ENST00000444172 MUSTN1Q8IVN3 82 aa11.03□□□□□ -0.64
CIRBP-203ENST00000444172 COPS9Q8WXC6 57 aa11.03□□□□□ -0.64
CIRBP-203ENST00000444172 DLEU1O43261 78 aa11.02□□□□□ -0.65
CIRBP-203ENST00000444172 IFITM1P13164 125 aa11.02□□□□□ -0.65
CIRBP-203ENST00000444172 HNRNPA3P51991 378 aaKnown RBP11.02□□□□□ -0.65
CIRBP-203ENST00000444172 SPANXB1Q9NS25 103 aaPredicted RBP11.02□□□□□ -0.65
CIRBP-203ENST00000444172 VPS13BQ7Z7G8 4022 aa11.02□□□□□ -0.65
CIRBP-203ENST00000444172 S100A12P80511 92 aa11.01□□□□□ -0.65
CIRBP-203ENST00000444172 SLC25A34Q6PIV7 304 aa11.01□□□□□ -0.65
CIRBP-203ENST00000444172 TRBV10-2A0A0K0K1G8 114 aa11□□□□□ -0.65
CIRBP-203ENST00000444172 IGLV7-43P04211 117 aa11□□□□□ -0.65
CIRBP-203ENST00000444172 S100A7L2Q5SY68 101 aa11□□□□□ -0.65
CIRBP-203ENST00000444172 TRBV10-3A0A0K0K1G6 114 aa10.99□□□□□ -0.65
CIRBP-203ENST00000444172 DDTP30046 118 aa10.98□□□□□ -0.65
CIRBP-203ENST00000444172 REG3GQ6UW15 175 aa10.98□□□□□ -0.65
CIRBP-203ENST00000444172 HIST1H4GQ99525 98 aa10.98□□□□□ -0.65
CIRBP-203ENST00000444172 BCE1O60756 84 aa10.97□□□□□ -0.65
CIRBP-203ENST00000444172 OR13C6PQ8NH95 151 aa10.97□□□□□ -0.65
CIRBP-203ENST00000444172 LOC105371267A0A1B0GV96 52 aa10.96□□□□□ -0.65
CIRBP-203ENST00000444172 SPINK6Q6UWN8 80 aa10.96□□□□□ -0.65
CIRBP-203ENST00000444172 LINC00518Q8N0U6 118 aa10.96□□□□□ -0.65
CIRBP-203ENST00000444172 TMEM126AQ9H061 195 aa10.96□□□□□ -0.65
CIRBP-203ENST00000444172 FAM19A1Q7Z5A9 133 aa10.95□□□□□ -0.66
CIRBP-203ENST00000444172 PRYO14603 147 aa10.94□□□□□ -0.66
CIRBP-203ENST00000444172 UBE2AP49459 152 aa10.94□□□□□ -0.66
CIRBP-203ENST00000444172 PPDPFQ9H3Y8 114 aa10.94□□□□□ -0.66
CIRBP-203ENST00000444172 HIGD1BQ9P298 99 aa10.94□□□□□ -0.66
CIRBP-203ENST00000444172 IGLV6-57P01721 117 aa10.93□□□□□ -0.66
CIRBP-203ENST00000444172 KCNQ1DNQ9H478 68 aa10.93□□□□□ -0.66
CIRBP-203ENST00000444172 ZNF861PO60384 105 aa10.92□□□□□ -0.66
CIRBP-203ENST00000444172 C2orf91Q6ZV80 131 aa10.92□□□□□ -0.66
CIRBP-203ENST00000444172 SMIM6P0DI80 62 aa10.91□□□□□ -0.66
CIRBP-203ENST00000444172 RPL28P46779 137 aaKnown RBP10.91□□□□□ -0.66
CIRBP-203ENST00000444172 LINC00337Q8N6G1 96 aa10.91□□□□□ -0.66
CIRBP-203ENST00000444172 SRRM2Q9UQ35 2752 aaKnown RBP10.9□□□□□ -0.66
CIRBP-203ENST00000444172 A4D1N5 150 aa10.9□□□□□ -0.66
CIRBP-203ENST00000444172 PRLHP81277 87 aa10.9□□□□□ -0.66
CIRBP-203ENST00000444172 TRAV23DV6A0A075B6W5 121 aa10.89□□□□□ -0.67
CIRBP-203ENST00000444172 A6NDN8 102 aa10.89□□□□□ -0.67
CIRBP-203ENST00000444172 DIRC1Q969H9 104 aa10.89□□□□□ -0.67
CIRBP-203ENST00000444172 UQCR10Q9UDW1 63 aa10.89□□□□□ -0.67
CIRBP-203ENST00000444172 ETDCA0A1B0GVM5 59 aa10.88□□□□□ -0.67
CIRBP-203ENST00000444172 CBY1Q9Y3M2 126 aa10.88□□□□□ -0.67
CIRBP-203ENST00000444172 PKHD1L1Q86WI1 4243 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms