RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 HERV-K104P63124 156 aa6.41□□□□□ -1.38
HLA-DQB1-206ENST00000443574 MEIG1Q5JSS6 88 aa6.41□□□□□ -1.38
HLA-DQB1-206ENST00000443574 REG3GQ6UW15 175 aa6.41□□□□□ -1.38
HLA-DQB1-206ENST00000443574 PLEKHB2Q96CS7 222 aa6.41□□□□□ -1.38
HLA-DQB1-206ENST00000443574 ZNF625Q96I27 306 aaPredicted RBP6.41□□□□□ -1.38
HLA-DQB1-206ENST00000443574 KRTAP4-8Q9BYQ9 185 aa6.41□□□□□ -1.38
HLA-DQB1-206ENST00000443574 MYMXA0A1B0GTQ4 84 aa6.4□□□□□ -1.38
HLA-DQB1-206ENST00000443574 RPL24P83731 157 aaKnown RBP6.4□□□□□ -1.38
HLA-DQB1-206ENST00000443574 SERTAD4-AS1Q5TG53 156 aa6.4□□□□□ -1.38
HLA-DQB1-206ENST00000443574 MRPL55Q7Z7F7 128 aaKnown RBP6.4□□□□□ -1.38
HLA-DQB1-206ENST00000443574 PLA2G2DQ9UNK4 145 aa6.4□□□□□ -1.38
HLA-DQB1-206ENST00000443574 C22orf24Q9Y442 160 aa6.4□□□□□ -1.38
HLA-DQB1-206ENST00000443574 LINC00158P58513 81 aa6.39□□□□□ -1.39
HLA-DQB1-206ENST00000443574 COA6Q5JTJ3 125 aaKnown RBP6.39□□□□□ -1.39
HLA-DQB1-206ENST00000443574 NDUFA12Q9UI09 145 aa6.39□□□□□ -1.39
HLA-DQB1-206ENST00000443574 FAT3Q8TDW7 4589 aa6.38□□□□□ -1.39
HLA-DQB1-206ENST00000443574 SYS1-DBNDD2H3BUS1 97 aa6.38□□□□□ -1.39
HLA-DQB1-206ENST00000443574 LEPROTO15243 131 aa6.38□□□□□ -1.39
HLA-DQB1-206ENST00000443574 IGLV7-43P04211 117 aa6.38□□□□□ -1.39
HLA-DQB1-206ENST00000443574 LGALS3P17931 250 aaKnown RBP6.38□□□□□ -1.39
HLA-DQB1-206ENST00000443574 NMUP48645 174 aa6.38□□□□□ -1.39
HLA-DQB1-206ENST00000443574 PMCHL2Q9BQD1 86 aa6.38□□□□□ -1.39
HLA-DQB1-206ENST00000443574 SND1-IT1Q9HBX3 110 aa6.38□□□□□ -1.39
HLA-DQB1-206ENST00000443574 IGLV5-37A0A075B6J1 123 aa6.37□□□□□ -1.39
HLA-DQB1-206ENST00000443574 C20orf202A1L168 122 aa6.37□□□□□ -1.39
HLA-DQB1-206ENST00000443574 AKR1D1P51857 326 aa6.37□□□□□ -1.39
HLA-DQB1-206ENST00000443574 PET117Q6UWS5 81 aa6.37□□□□□ -1.39
HLA-DQB1-206ENST00000443574 KRTAP7-1Q8IUC3 87 aa6.37□□□□□ -1.39
HLA-DQB1-206ENST00000443574 DIRC1Q969H9 104 aa6.37□□□□□ -1.39
HLA-DQB1-206ENST00000443574 J3QQQ9 107 aa6.36□□□□□ -1.39
HLA-DQB1-206ENST00000443574 LRP1Q07954 4544 aaKnown RBP6.36□□□□□ -1.39
HLA-DQB1-206ENST00000443574 A0A0U1RRA0 63 aa6.35□□□□□ -1.39
HLA-DQB1-206ENST00000443574 SMIM13P0DJ93 91 aa6.35□□□□□ -1.39
HLA-DQB1-206ENST00000443574 KRTDAPP60985 99 aa6.35□□□□□ -1.39
HLA-DQB1-206ENST00000443574 LINC01545Q5VT33 79 aa6.35□□□□□ -1.39
HLA-DQB1-206ENST00000443574 GAGE10A6NGK3 116 aa6.34□□□□□ -1.39
HLA-DQB1-206ENST00000443574 E9PLD3 99 aa6.34□□□□□ -1.39
HLA-DQB1-206ENST00000443574 SRSF9Q13242 221 aaKnown RBP eCLIP6.34□□□□□ -1.39
HLA-DQB1-206ENST00000443574 ANKRD39Q53RE8 183 aa6.34□□□□□ -1.39
HLA-DQB1-206ENST00000443574 LINC00167Q96N53 147 aa6.34□□□□□ -1.39
HLA-DQB1-206ENST00000443574 MIEN1Q9BRT3 115 aa6.34□□□□□ -1.39
HLA-DQB1-206ENST00000443574 RPL37AP8A6NKH3 93 aa6.33□□□□□ -1.4
HLA-DQB1-206ENST00000443574 H0Y9J4 135 aa6.33□□□□□ -1.4
HLA-DQB1-206ENST00000443574 S100A6P06703 90 aa6.33□□□□□ -1.4
HLA-DQB1-206ENST00000443574 C3orf79P0CE67 100 aa6.33□□□□□ -1.4
HLA-DQB1-206ENST00000443574 VPREB1P12018 145 aa6.33□□□□□ -1.4
HLA-DQB1-206ENST00000443574 S100A2P29034 98 aa6.33□□□□□ -1.4
HLA-DQB1-206ENST00000443574 RPL28P46779 137 aaKnown RBP6.33□□□□□ -1.4
HLA-DQB1-206ENST00000443574 TSPEAR-AS2P59090 65 aa6.33□□□□□ -1.4
HLA-DQB1-206ENST00000443574 MIR7-3HGQ8N6C7 128 aa6.33□□□□□ -1.4
HLA-DQB1-206ENST00000443574 HERC1Q15751 4861 aa6.32□□□□□ -1.4
HLA-DQB1-206ENST00000443574 IGKV2-28A0A075B6P5 120 aa6.32□□□□□ -1.4
HLA-DQB1-206ENST00000443574 BCE1O60756 84 aa6.32□□□□□ -1.4
HLA-DQB1-206ENST00000443574 IGKV2D-28P01615 120 aa6.32□□□□□ -1.4
HLA-DQB1-206ENST00000443574 S100A12P80511 92 aa6.32□□□□□ -1.4
HLA-DQB1-206ENST00000443574 KRTAP11-1Q8IUC1 163 aa6.32□□□□□ -1.4
HLA-DQB1-206ENST00000443574 BOD1L2Q8IYS8 172 aa6.32□□□□□ -1.4
HLA-DQB1-206ENST00000443574 LINC01600Q96MT4 127 aa6.32□□□□□ -1.4
HLA-DQB1-206ENST00000443574 IGKV2D-26A0A0A0MRZ7 120 aa6.31□□□□□ -1.4
HLA-DQB1-206ENST00000443574 ZNF861PO60384 105 aa6.31□□□□□ -1.4
HLA-DQB1-206ENST00000443574 UBE2AP49459 152 aa6.31□□□□□ -1.4
HLA-DQB1-206ENST00000443574 IGLV1-50A0A075B6I6 118 aa6.29□□□□□ -1.4
HLA-DQB1-206ENST00000443574 M0R378 163 aa6.29□□□□□ -1.4
HLA-DQB1-206ENST00000443574 A0A0J9YXY3 114 aa6.28□□□□□ -1.4
HLA-DQB1-206ENST00000443574 ZNF815PA8K554 130 aa6.28□□□□□ -1.4
HLA-DQB1-206ENST00000443574 TMEM126AQ9H061 195 aa6.28□□□□□ -1.4
HLA-DQB1-206ENST00000443574 PRYO14603 147 aa6.27□□□□□ -1.41
HLA-DQB1-206ENST00000443574 NCR3O14931 201 aa6.27□□□□□ -1.41
HLA-DQB1-206ENST00000443574 MT1HL1P0DM35 61 aa6.27□□□□□ -1.41
HLA-DQB1-206ENST00000443574 RPL13AP40429 203 aaKnown RBP6.27□□□□□ -1.41
HLA-DQB1-206ENST00000443574 FAM19A1Q7Z5A9 133 aa6.27□□□□□ -1.41
HLA-DQB1-206ENST00000443574 HIST3H2BBQ8N257 126 aa6.27□□□□□ -1.41
HLA-DQB1-206ENST00000443574 DAND5Q8N907 189 aa6.27□□□□□ -1.41
HLA-DQB1-206ENST00000443574 KRTAP9-2Q9BYQ4 174 aa6.27□□□□□ -1.41
HLA-DQB1-206ENST00000443574 SPANXB1Q9NS25 103 aaPredicted RBP6.27□□□□□ -1.41
HLA-DQB1-206ENST00000443574 LOC107984156A0A0G2JMH3 177 aa6.26□□□□□ -1.41
HLA-DQB1-206ENST00000443574 TRBV10-2A0A0K0K1G8 114 aa6.26□□□□□ -1.41
HLA-DQB1-206ENST00000443574 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.26□□□□□ -1.41
HLA-DQB1-206ENST00000443574 SNRPEP62304 92 aaKnown RBP6.26□□□□□ -1.41
HLA-DQB1-206ENST00000443574 SCGB1D4Q6XE38 83 aa6.26□□□□□ -1.41
HLA-DQB1-206ENST00000443574 ARL17AQ8IVW1 177 aa6.26□□□□□ -1.41
HLA-DQB1-206ENST00000443574 HIST1H2BLQ99880 126 aa6.26□□□□□ -1.41
HLA-DQB1-206ENST00000443574 TNXBP22105 4242 aa6.25□□□□□ -1.41
HLA-DQB1-206ENST00000443574 HSBP1L1C9JCN9 74 aa6.25□□□□□ -1.41
HLA-DQB1-206ENST00000443574 TMEM238C9JI98 176 aa6.25□□□□□ -1.41
HLA-DQB1-206ENST00000443574 TIMM17BO60830 172 aa6.25□□□□□ -1.41
HLA-DQB1-206ENST00000443574 NDUFC2O95298 119 aa6.25□□□□□ -1.41
HLA-DQB1-206ENST00000443574 Q8NDZ9 215 aa6.25□□□□□ -1.41
HLA-DQB1-206ENST00000443574 COPS9Q8WXC6 57 aa6.25□□□□□ -1.41
HLA-DQB1-206ENST00000443574 KRTAP4-12Q9BQ66 201 aa6.25□□□□□ -1.41
HLA-DQB1-206ENST00000443574 CBY1Q9Y3M2 126 aa6.25□□□□□ -1.41
HLA-DQB1-206ENST00000443574 PRLHP81277 87 aa6.24□□□□□ -1.41
HLA-DQB1-206ENST00000443574 S100A7L2Q5SY68 101 aa6.24□□□□□ -1.41
HLA-DQB1-206ENST00000443574 ATOH7Q8N100 152 aa6.24□□□□□ -1.41
HLA-DQB1-206ENST00000443574 ETDCA0A1B0GVM5 59 aa6.23□□□□□ -1.41
HLA-DQB1-206ENST00000443574 DDTP30046 118 aa6.23□□□□□ -1.41
HLA-DQB1-206ENST00000443574 NPC2P61916 151 aa6.23□□□□□ -1.41
HLA-DQB1-206ENST00000443574 KRTAP13-1Q8IUC0 172 aa6.23□□□□□ -1.41
HLA-DQB1-206ENST00000443574 SPANXCQ9NY87 97 aa6.23□□□□□ -1.41
HLA-DQB1-206ENST00000443574 TRBV10-3A0A0K0K1G6 114 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms