RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 ANKRD39Q53RE8 183 aa4.11□□□□□ -1.75
RFX3-206ENST00000442560 FAM19A1Q7Z5A9 133 aa4.11□□□□□ -1.75
RFX3-206ENST00000442560 IGLV7-46A0A075B6I9 117 aa4.1□□□□□ -1.75
RFX3-206ENST00000442560 ATP5LO75964 103 aa4.1□□□□□ -1.75
RFX3-206ENST00000442560 CST9LQ9H4G1 147 aa4.1□□□□□ -1.75
RFX3-206ENST00000442560 TMEM238C9JI98 176 aa4.09□□□□□ -1.75
RFX3-206ENST00000442560 VPREB1P12018 145 aa4.09□□□□□ -1.75
RFX3-206ENST00000442560 PMVKQ15126 192 aa4.09□□□□□ -1.75
RFX3-206ENST00000442560 TPRXLQ17RH7 258 aa4.09□□□□□ -1.75
RFX3-206ENST00000442560 C3orf22Q8N5N4 141 aa4.09□□□□□ -1.75
RFX3-206ENST00000442560 TMEM126AQ9H061 195 aa4.09□□□□□ -1.75
RFX3-206ENST00000442560 LINC01549A6NIU2 74 aa4.08□□□□□ -1.76
RFX3-206ENST00000442560 H3BRM9 83 aa4.08□□□□□ -1.76
RFX3-206ENST00000442560 M0R378 163 aa4.08□□□□□ -1.76
RFX3-206ENST00000442560 PLEKHB2Q96CS7 222 aa4.08□□□□□ -1.76
RFX3-206ENST00000442560 ZNF625Q96I27 306 aaPredicted RBP4.08□□□□□ -1.76
RFX3-206ENST00000442560 PPDPFQ9H3Y8 114 aa4.08□□□□□ -1.76
RFX3-206ENST00000442560 LINC01546A6NGU7 62 aa4.07□□□□□ -1.76
RFX3-206ENST00000442560 NDUFA6P56556 154 aa4.07□□□□□ -1.76
RFX3-206ENST00000442560 RAB14P61106 215 aa4.07□□□□□ -1.76
RFX3-206ENST00000442560 RPL24P83731 157 aaKnown RBP4.07□□□□□ -1.76
RFX3-206ENST00000442560 FA2HQ7L5A8 372 aa4.07□□□□□ -1.76
RFX3-206ENST00000442560 CBLN2Q8IUK8 224 aa4.07□□□□□ -1.76
RFX3-206ENST00000442560 Q8NDZ9 215 aa4.07□□□□□ -1.76
RFX3-206ENST00000442560 HIGD2AQ9BW72 106 aa4.07□□□□□ -1.76
RFX3-206ENST00000442560 SND1-IT1Q9HBX3 110 aa4.07□□□□□ -1.76
RFX3-206ENST00000442560 SMCO4Q9NRQ5 59 aa4.07□□□□□ -1.76
RFX3-206ENST00000442560 ERG28Q9UKR5 140 aa4.07□□□□□ -1.76
RFX3-206ENST00000442560 IGLV5-39A0A0G2JS06 123 aa4.06□□□□□ -1.76
RFX3-206ENST00000442560 IGLC3P0DOY3 106 aa4.06□□□□□ -1.76
RFX3-206ENST00000442560 ZNF22P17026 224 aaPredicted RBP4.06□□□□□ -1.76
RFX3-206ENST00000442560 CTAG1AP78358 180 aa4.06□□□□□ -1.76
RFX3-206ENST00000442560 GNB1LQ9BYB4 327 aa4.06□□□□□ -1.76
RFX3-206ENST00000442560 TRAV9-1A0A075B6T8 112 aa4.05□□□□□ -1.76
RFX3-206ENST00000442560 S100PP25815 95 aa4.05□□□□□ -1.76
RFX3-206ENST00000442560 FABP9Q0Z7S8 132 aa4.05□□□□□ -1.76
RFX3-206ENST00000442560 SPAG11AQ6PDA7 123 aa4.05□□□□□ -1.76
RFX3-206ENST00000442560 A0A0U1RRA0 63 aa4.04□□□□□ -1.76
RFX3-206ENST00000442560 LINC00158P58513 81 aa4.04□□□□□ -1.76
RFX3-206ENST00000442560 COX17Q14061 63 aa4.04□□□□□ -1.76
RFX3-206ENST00000442560 DAND5Q8N907 189 aa4.04□□□□□ -1.76
RFX3-206ENST00000442560 SPRR4Q96PI1 79 aa4.04□□□□□ -1.76
RFX3-206ENST00000442560 A0A096LNJ9 63 aa4.03□□□□□ -1.76
RFX3-206ENST00000442560 TMEM218A2RU14 115 aa4.03□□□□□ -1.76
RFX3-206ENST00000442560 C11orf86A6NJI1 115 aa4.03□□□□□ -1.76
RFX3-206ENST00000442560 COX19Q49B96 90 aa4.03□□□□□ -1.76
RFX3-206ENST00000442560 CLLU1Q5K131 121 aa4.03□□□□□ -1.76
RFX3-206ENST00000442560 TMEM170BQ5T4T1 132 aa4.03□□□□□ -1.76
RFX3-206ENST00000442560 BAGE3Q86Y29 109 aa4.03□□□□□ -1.76
RFX3-206ENST00000442560 LINC00337Q8N6G1 96 aa4.03□□□□□ -1.76
RFX3-206ENST00000442560 URB1-AS1Q96HZ7 61 aa4.03□□□□□ -1.76
RFX3-206ENST00000442560 PMCHL1Q16048 86 aa4.02□□□□□ -1.77
RFX3-206ENST00000442560 FP248Q71RG6 208 aaPredicted RBP4.02□□□□□ -1.77
RFX3-206ENST00000442560 Q8NBF4 154 aa4.02□□□□□ -1.77
RFX3-206ENST00000442560 SMCR5Q8TEV8 140 aa4.02□□□□□ -1.77
RFX3-206ENST00000442560 HBDP02042 147 aa4.01□□□□□ -1.77
RFX3-206ENST00000442560 LINC00614P0C842 121 aa4.01□□□□□ -1.77
RFX3-206ENST00000442560 KRTAP13-3Q3SY46 172 aa4.01□□□□□ -1.77
RFX3-206ENST00000442560 UQCC3Q6UW78 93 aa4.01□□□□□ -1.77
RFX3-206ENST00000442560 KRTAP4-1Q9BYQ7 146 aa4.01□□□□□ -1.77
RFX3-206ENST00000442560 ZNF706Q9Y5V0 76 aaPredicted RBP4.01□□□□□ -1.77
RFX3-206ENST00000442560 PRYO14603 147 aa4□□□□□ -1.77
RFX3-206ENST00000442560 NCR3O14931 201 aa4□□□□□ -1.77
RFX3-206ENST00000442560 SMIM13P0DJ93 91 aa4□□□□□ -1.77
RFX3-206ENST00000442560 LINC01547P58512 204 aaPredicted RBP4□□□□□ -1.77
RFX3-206ENST00000442560 ASB16-AS1Q495Z4 193 aa4□□□□□ -1.77
RFX3-206ENST00000442560 MEIG1Q5JSS6 88 aa4□□□□□ -1.77
RFX3-206ENST00000442560 SFTA2Q6UW10 78 aa4□□□□□ -1.77
RFX3-206ENST00000442560 C18orf32Q8TCD1 76 aa4□□□□□ -1.77
RFX3-206ENST00000442560 SEC11CQ9BY50 192 aa4□□□□□ -1.77
RFX3-206ENST00000442560 CHTOPQ9Y3Y2 248 aaKnown RBP4□□□□□ -1.77
RFX3-206ENST00000442560 ETDCA0A1B0GVM5 59 aa3.99□□□□□ -1.77
RFX3-206ENST00000442560 ATP6V1G1O75348 118 aa3.99□□□□□ -1.77
RFX3-206ENST00000442560 SPINK1P00995 79 aa3.99□□□□□ -1.77
RFX3-206ENST00000442560 SPRR1AP35321 89 aa3.99□□□□□ -1.77
RFX3-206ENST00000442560 BOD1L2Q8IYS8 172 aa3.99□□□□□ -1.77
RFX3-206ENST00000442560 MIR7-3HGQ8N6C7 128 aa3.99□□□□□ -1.77
RFX3-206ENST00000442560 RPS10P5Q9NQ39 176 aa3.99□□□□□ -1.77
RFX3-206ENST00000442560 TRAPPC1Q9Y5R8 145 aa3.99□□□□□ -1.77
RFX3-206ENST00000442560 IGLV9-49A0A0B4J1Y8 123 aa3.98□□□□□ -1.77
RFX3-206ENST00000442560 TMEM223A0PJW6 202 aa3.98□□□□□ -1.77
RFX3-206ENST00000442560 SEC61BP60468 96 aaKnown RBP3.98□□□□□ -1.77
RFX3-206ENST00000442560 GAGE2AQ6NT46 116 aa3.98□□□□□ -1.77
RFX3-206ENST00000442560 KCNQ1DNQ9H478 68 aa3.98□□□□□ -1.77
RFX3-206ENST00000442560 TRBV10-3A0A0K0K1G6 114 aa3.97□□□□□ -1.77
RFX3-206ENST00000442560 KRTAP4-16G5E9R7 235 aaPredicted RBP3.97□□□□□ -1.77
RFX3-206ENST00000442560 IFITM2Q01629 132 aa3.97□□□□□ -1.77
RFX3-206ENST00000442560 MOBPQ13875 183 aa3.97□□□□□ -1.77
RFX3-206ENST00000442560 B5MCH6 92 aa3.96□□□□□ -1.78
RFX3-206ENST00000442560 ERC2-IT1O76042 136 aa3.96□□□□□ -1.78
RFX3-206ENST00000442560 HERV-K104P63124 156 aa3.96□□□□□ -1.78
RFX3-206ENST00000442560 RHEBQ15382 184 aa3.96□□□□□ -1.78
RFX3-206ENST00000442560 LINC00483Q53H64 154 aa3.96□□□□□ -1.78
RFX3-206ENST00000442560 SSBP3-AS1Q7Z2R9 100 aa3.96□□□□□ -1.78
RFX3-206ENST00000442560 COMMD7Q86VX2 200 aa3.96□□□□□ -1.78
RFX3-206ENST00000442560 Q8N377 158 aa3.96□□□□□ -1.78
RFX3-206ENST00000442560 TRAV12-1A0A0B4J245 112 aa3.95□□□□□ -1.78
RFX3-206ENST00000442560 S100A12P80511 92 aa3.95□□□□□ -1.78
RFX3-206ENST00000442560 C10orf91Q5T1B1 145 aa3.95□□□□□ -1.78
RFX3-206ENST00000442560 IFI27L1Q96BM0 104 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms