RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 MRPL55Q7Z7F7 128 aaKnown RBP9.26□□□□□ -0.93
CSNK1E-210ENST00000442216 E9PLD3 99 aa9.25□□□□□ -0.93
CSNK1E-210ENST00000442216 KRTAP11-1Q8IUC1 163 aa9.25□□□□□ -0.93
CSNK1E-210ENST00000442216 LGALS3P17931 250 aaKnown RBP9.24□□□□□ -0.93
CSNK1E-210ENST00000442216 TSPEAR-AS2P59090 65 aa9.24□□□□□ -0.93
CSNK1E-210ENST00000442216 RPL24P83731 157 aaKnown RBP9.24□□□□□ -0.93
CSNK1E-210ENST00000442216 MEIG1Q5JSS6 88 aa9.24□□□□□ -0.93
CSNK1E-210ENST00000442216 NKAPP1Q8N9T2 125 aa9.24□□□□□ -0.93
CSNK1E-210ENST00000442216 J3QL48 77 aa9.23□□□□□ -0.93
CSNK1E-210ENST00000442216 IGLV7-43P04211 117 aa9.23□□□□□ -0.93
CSNK1E-210ENST00000442216 AKR1D1P51857 326 aa9.23□□□□□ -0.93
CSNK1E-210ENST00000442216 KRTDAPP60985 99 aa9.23□□□□□ -0.93
CSNK1E-210ENST00000442216 C20orf202A1L168 122 aa9.22□□□□□ -0.93
CSNK1E-210ENST00000442216 SMIM13P0DJ93 91 aa9.22□□□□□ -0.93
CSNK1E-210ENST00000442216 VPREB1P12018 145 aa9.22□□□□□ -0.93
CSNK1E-210ENST00000442216 LINC00167Q96N53 147 aa9.22□□□□□ -0.93
CSNK1E-210ENST00000442216 S100A6P06703 90 aa9.21□□□□□ -0.94
CSNK1E-210ENST00000442216 HIST3H2BBQ8N257 126 aa9.21□□□□□ -0.94
CSNK1E-210ENST00000442216 PKHD1L1Q86WI1 4243 aa9.2□□□□□ -0.94
CSNK1E-210ENST00000442216 A0A0U1RRA0 63 aa9.2□□□□□ -0.94
CSNK1E-210ENST00000442216 S100A2P29034 98 aa9.2□□□□□ -0.94
CSNK1E-210ENST00000442216 REG3GQ6UW15 175 aa9.2□□□□□ -0.94
CSNK1E-210ENST00000442216 MIR7-3HGQ8N6C7 128 aa9.2□□□□□ -0.94
CSNK1E-210ENST00000442216 DMBT1Q9UGM3 2413 aaPredicted RBP9.19□□□□□ -0.94
CSNK1E-210ENST00000442216 LOC107984156A0A0G2JMH3 177 aa9.18□□□□□ -0.94
CSNK1E-210ENST00000442216 ARL17AQ8IVW1 177 aa9.18□□□□□ -0.94
CSNK1E-210ENST00000442216 MYCBP2O75592 4640 aa9.18□□□□□ -0.94
CSNK1E-210ENST00000442216 RPL37AP8A6NKH3 93 aa9.17□□□□□ -0.94
CSNK1E-210ENST00000442216 DIRC1Q969H9 104 aa9.17□□□□□ -0.94
CSNK1E-210ENST00000442216 HIST1H2BLQ99880 126 aa9.17□□□□□ -0.94
CSNK1E-210ENST00000442216 IGLV1-50A0A075B6I6 118 aa9.16□□□□□ -0.94
CSNK1E-210ENST00000442216 GAGE10A6NGK3 116 aa9.16□□□□□ -0.94
CSNK1E-210ENST00000442216 LINC01600Q96MT4 127 aa9.16□□□□□ -0.94
CSNK1E-210ENST00000442216 IGKV2D-26A0A0A0MRZ7 120 aa9.15□□□□□ -0.94
CSNK1E-210ENST00000442216 A0A0J9YXY3 114 aa9.15□□□□□ -0.94
CSNK1E-210ENST00000442216 BCE1O60756 84 aa9.15□□□□□ -0.94
CSNK1E-210ENST00000442216 BOD1L2Q8IYS8 172 aa9.15□□□□□ -0.94
CSNK1E-210ENST00000442216 Q8NDZ9 215 aa9.15□□□□□ -0.94
CSNK1E-210ENST00000442216 H0Y9J4 135 aa9.14□□□□□ -0.95
CSNK1E-210ENST00000442216 M0R378 163 aa9.14□□□□□ -0.95
CSNK1E-210ENST00000442216 ZNF861PO60384 105 aa9.14□□□□□ -0.95
CSNK1E-210ENST00000442216 SNRPEP62304 92 aaKnown RBP9.14□□□□□ -0.95
CSNK1E-210ENST00000442216 IGKV2-28A0A075B6P5 120 aa9.12□□□□□ -0.95
CSNK1E-210ENST00000442216 C5orf52A6NGY3 159 aa9.12□□□□□ -0.95
CSNK1E-210ENST00000442216 TIMM17BO60830 172 aa9.12□□□□□ -0.95
CSNK1E-210ENST00000442216 IGKV2D-28P01615 120 aa9.12□□□□□ -0.95
CSNK1E-210ENST00000442216 MT1HL1P0DM35 61 aa9.12□□□□□ -0.95
CSNK1E-210ENST00000442216 RPL28P46779 137 aaKnown RBP9.12□□□□□ -0.95
CSNK1E-210ENST00000442216 MIEN1Q9BRT3 115 aa9.12□□□□□ -0.95
CSNK1E-210ENST00000442216 ZNF815PA8K554 130 aa9.11□□□□□ -0.95
CSNK1E-210ENST00000442216 DAND5Q8N907 189 aa9.11□□□□□ -0.95
CSNK1E-210ENST00000442216 LRP1Q07954 4544 aaKnown RBP9.11□□□□□ -0.95
CSNK1E-210ENST00000442216 NDUFC2O95298 119 aa9.1□□□□□ -0.95
CSNK1E-210ENST00000442216 ATOH7Q8N100 152 aa9.1□□□□□ -0.95
CSNK1E-210ENST00000442216 TRBV10-2A0A0K0K1G8 114 aa9.09□□□□□ -0.95
CSNK1E-210ENST00000442216 ANKRD39Q53RE8 183 aa9.09□□□□□ -0.95
CSNK1E-210ENST00000442216 ADAMTSL4-AS1Q5T5F5 129 aa9.09□□□□□ -0.95
CSNK1E-210ENST00000442216 TMEM126AQ9H061 195 aa9.09□□□□□ -0.95
CSNK1E-210ENST00000442216 FAT3Q8TDW7 4589 aa9.09□□□□□ -0.95
CSNK1E-210ENST00000442216 KRTAP13-1Q8IUC0 172 aa9.08□□□□□ -0.96
CSNK1E-210ENST00000442216 LITAFQ99732 161 aa9.08□□□□□ -0.96
CSNK1E-210ENST00000442216 PRYO14603 147 aa9.07□□□□□ -0.96
CSNK1E-210ENST00000442216 NCR3O14931 201 aa9.07□□□□□ -0.96
CSNK1E-210ENST00000442216 UBE2AP49459 152 aa9.07□□□□□ -0.96
CSNK1E-210ENST00000442216 KRTAP10-8P60410 259 aa9.07□□□□□ -0.96
CSNK1E-210ENST00000442216 TTTY13Q9BZ97 58 aa9.07□□□□□ -0.96
CSNK1E-210ENST00000442216 SPANXB1Q9NS25 103 aaPredicted RBP9.07□□□□□ -0.96
CSNK1E-210ENST00000442216 TMEM238C9JI98 176 aa9.06□□□□□ -0.96
CSNK1E-210ENST00000442216 SOSTDC1Q6X4U4 206 aa9.06□□□□□ -0.96
CSNK1E-210ENST00000442216 KCNQ1DNQ9H478 68 aa9.06□□□□□ -0.96
CSNK1E-210ENST00000442216 HSBP1L1C9JCN9 74 aa9.05□□□□□ -0.96
CSNK1E-210ENST00000442216 KRTAP1-4P0C5Y4 121 aa9.05□□□□□ -0.96
CSNK1E-210ENST00000442216 S100A12P80511 92 aa9.05□□□□□ -0.96
CSNK1E-210ENST00000442216 FAM19A1Q7Z5A9 133 aa9.05□□□□□ -0.96
CSNK1E-210ENST00000442216 SCGB1D4Q6XE38 83 aa9.04□□□□□ -0.96
CSNK1E-210ENST00000442216 LINC00308Q8TCZ7 52 aa9.04□□□□□ -0.96
CSNK1E-210ENST00000442216 TRBV10-3A0A0K0K1G6 114 aa9.03□□□□□ -0.96
CSNK1E-210ENST00000442216 DDTP30046 118 aa9.03□□□□□ -0.96
CSNK1E-210ENST00000442216 SPRR1AP35321 89 aa9.03□□□□□ -0.96
CSNK1E-210ENST00000442216 SPANXDQ9BXN6 97 aa9.03□□□□□ -0.96
CSNK1E-210ENST00000442216 PPDPFQ9H3Y8 114 aa9.03□□□□□ -0.96
CSNK1E-210ENST00000442216 SPANXCQ9NY87 97 aa9.03□□□□□ -0.96
CSNK1E-210ENST00000442216 EIF4EBP3O60516 100 aaPredicted RBP9.02□□□□□ -0.97
CSNK1E-210ENST00000442216 NPC2P61916 151 aa9.02□□□□□ -0.97
CSNK1E-210ENST00000442216 Q6ZVH6 145 aa9.02□□□□□ -0.97
CSNK1E-210ENST00000442216 PCP2Q8IVA1 136 aa9.02□□□□□ -0.97
CSNK1E-210ENST00000442216 LINC00337Q8N6G1 96 aa9.02□□□□□ -0.97
CSNK1E-210ENST00000442216 COPS9Q8WXC6 57 aa9.02□□□□□ -0.97
CSNK1E-210ENST00000442216 SCGB1D1O95968 90 aa9.01□□□□□ -0.97
CSNK1E-210ENST00000442216 PRLHP81277 87 aa9.01□□□□□ -0.97
CSNK1E-210ENST00000442216 S100A7L2Q5SY68 101 aa9.01□□□□□ -0.97
CSNK1E-210ENST00000442216 KRTAP4-16G5E9R7 235 aaPredicted RBP9□□□□□ -0.97
CSNK1E-210ENST00000442216 IGLV6-57P01721 117 aa9□□□□□ -0.97
CSNK1E-210ENST00000442216 IFITM1P13164 125 aa9□□□□□ -0.97
CSNK1E-210ENST00000442216 RPL13AP40429 203 aaKnown RBP9□□□□□ -0.97
CSNK1E-210ENST00000442216 CBY1Q9Y3M2 126 aa9□□□□□ -0.97
CSNK1E-210ENST00000442216 LINC00518Q8N0U6 118 aa8.99□□□□□ -0.97
CSNK1E-210ENST00000442216 PRR26Q8N8Z3 221 aa8.99□□□□□ -0.97
CSNK1E-210ENST00000442216 ETDCA0A1B0GVM5 59 aa8.97□□□□□ -0.97
CSNK1E-210ENST00000442216 TRAV23DV6A0A075B6W5 121 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms