RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 TP73-AS1Q9UF72 201 aa11.13□□□□□ -0.63
CPSF4-205ENST00000440514 E9PLD3 99 aa11.12□□□□□ -0.63
CPSF4-205ENST00000440514 SNRPEP62304 92 aaKnown RBP11.12□□□□□ -0.63
CPSF4-205ENST00000440514 RPL24P83731 157 aaKnown RBP11.12□□□□□ -0.63
CPSF4-205ENST00000440514 MEIG1Q5JSS6 88 aa11.12□□□□□ -0.63
CPSF4-205ENST00000440514 C22orf24Q9Y442 160 aa11.12□□□□□ -0.63
CPSF4-205ENST00000440514 LINC00158P58513 81 aa11.11□□□□□ -0.63
CPSF4-205ENST00000440514 C1orf137Q5JT78 98 aa11.11□□□□□ -0.63
CPSF4-205ENST00000440514 HIST3H2BBQ8N257 126 aa11.11□□□□□ -0.63
CPSF4-205ENST00000440514 A0A0U1RRA0 63 aa11.1□□□□□ -0.63
CPSF4-205ENST00000440514 KRTAP29-1A8MX34 341 aaPredicted RBP11.1□□□□□ -0.63
CPSF4-205ENST00000440514 SND1-IT1Q9HBX3 110 aa11.1□□□□□ -0.63
CPSF4-205ENST00000440514 DMBT1Q9UGM3 2413 aaPredicted RBP11.1□□□□□ -0.63
CPSF4-205ENST00000440514 LRP1Q07954 4544 aaKnown RBP11.09□□□□□ -0.63
CPSF4-205ENST00000440514 J3QL48 77 aa11.08□□□□□ -0.64
CPSF4-205ENST00000440514 NKAPP1Q8N9T2 125 aa11.08□□□□□ -0.64
CPSF4-205ENST00000440514 HIST1H2BLQ99880 126 aa11.08□□□□□ -0.64
CPSF4-205ENST00000440514 FAT3Q8TDW7 4589 aa11.08□□□□□ -0.64
CPSF4-205ENST00000440514 SMIM13P0DJ93 91 aa11.07□□□□□ -0.64
CPSF4-205ENST00000440514 MRPL55Q7Z7F7 128 aaKnown RBP11.07□□□□□ -0.64
CPSF4-205ENST00000440514 IGLV5-37A0A075B6J1 123 aa11.06□□□□□ -0.64
CPSF4-205ENST00000440514 GAGE10A6NGK3 116 aa11.06□□□□□ -0.64
CPSF4-205ENST00000440514 OXTP01178 125 aa11.06□□□□□ -0.64
CPSF4-205ENST00000440514 SRSF9Q13242 221 aaKnown RBP eCLIP11.06□□□□□ -0.64
CPSF4-205ENST00000440514 IGLV7-43P04211 117 aa11.05□□□□□ -0.64
CPSF4-205ENST00000440514 SPINK6Q6UWN8 80 aa11.05□□□□□ -0.64
CPSF4-205ENST00000440514 Q8NDZ9 215 aa11.05□□□□□ -0.64
CPSF4-205ENST00000440514 C5orf52A6NGY3 159 aa11.04□□□□□ -0.64
CPSF4-205ENST00000440514 VPREB1P12018 145 aa11.04□□□□□ -0.64
CPSF4-205ENST00000440514 LINC00167Q96N53 147 aa11.04□□□□□ -0.64
CPSF4-205ENST00000440514 HSBP1L1C9JCN9 74 aa11.03□□□□□ -0.64
CPSF4-205ENST00000440514 MIEN1Q9BRT3 115 aa11.03□□□□□ -0.64
CPSF4-205ENST00000440514 RPL37AP8A6NKH3 93 aa11.02□□□□□ -0.65
CPSF4-205ENST00000440514 MIR7-3HGQ8N6C7 128 aa11.02□□□□□ -0.65
CPSF4-205ENST00000440514 IGKV2D-26A0A0A0MRZ7 120 aa11□□□□□ -0.65
CPSF4-205ENST00000440514 TIMM17BO60830 172 aa10.99□□□□□ -0.65
CPSF4-205ENST00000440514 S100A12P80511 92 aa10.99□□□□□ -0.65
CPSF4-205ENST00000440514 DAND5Q8N907 189 aa10.99□□□□□ -0.65
CPSF4-205ENST00000440514 COPS9Q8WXC6 57 aa10.99□□□□□ -0.65
CPSF4-205ENST00000440514 IGKV2-28A0A075B6P5 120 aa10.98□□□□□ -0.65
CPSF4-205ENST00000440514 LOC107984156A0A0G2JMH3 177 aa10.98□□□□□ -0.65
CPSF4-205ENST00000440514 IGKV2D-28P01615 120 aa10.98□□□□□ -0.65
CPSF4-205ENST00000440514 ARL17AQ8IVW1 177 aa10.98□□□□□ -0.65
CPSF4-205ENST00000440514 HERC1Q15751 4861 aa10.98□□□□□ -0.65
CPSF4-205ENST00000440514 A0A0J9YXY3 114 aa10.97□□□□□ -0.65
CPSF4-205ENST00000440514 ZNF815PA8K554 130 aa10.97□□□□□ -0.65
CPSF4-205ENST00000440514 MT1HL1P0DM35 61 aa10.97□□□□□ -0.65
CPSF4-205ENST00000440514 REG3GQ6UW15 175 aa10.97□□□□□ -0.65
CPSF4-205ENST00000440514 BOD1L2Q8IYS8 172 aa10.97□□□□□ -0.65
CPSF4-205ENST00000440514 ATOH7Q8N100 152 aa10.96□□□□□ -0.65
CPSF4-205ENST00000440514 M0R378 163 aa10.95□□□□□ -0.66
CPSF4-205ENST00000440514 SCGB1D1O95968 90 aa10.95□□□□□ -0.66
CPSF4-205ENST00000440514 DIRC1Q969H9 104 aa10.95□□□□□ -0.66
CPSF4-205ENST00000440514 H0Y9J4 135 aa10.94□□□□□ -0.66
CPSF4-205ENST00000440514 BCE1O60756 84 aa10.94□□□□□ -0.66
CPSF4-205ENST00000440514 NDUFC2O95298 119 aa10.94□□□□□ -0.66
CPSF4-205ENST00000440514 SCGB1D4Q6XE38 83 aa10.94□□□□□ -0.66
CPSF4-205ENST00000440514 TTTY13Q9BZ97 58 aa10.94□□□□□ -0.66
CPSF4-205ENST00000440514 CBY1Q9Y3M2 126 aa10.94□□□□□ -0.66
CPSF4-205ENST00000440514 IGLV1-50A0A075B6I6 118 aa10.93□□□□□ -0.66
CPSF4-205ENST00000440514 TMEM238C9JI98 176 aa10.93□□□□□ -0.66
CPSF4-205ENST00000440514 NCR3O14931 201 aa10.93□□□□□ -0.66
CPSF4-205ENST00000440514 Q6ZVH6 145 aa10.93□□□□□ -0.66
CPSF4-205ENST00000440514 LINC01600Q96MT4 127 aa10.93□□□□□ -0.66
CPSF4-205ENST00000440514 TRBV10-2A0A0K0K1G8 114 aa10.92□□□□□ -0.66
CPSF4-205ENST00000440514 ANKRD39Q53RE8 183 aa10.92□□□□□ -0.66
CPSF4-205ENST00000440514 ZNF861PO60384 105 aa10.91□□□□□ -0.66
CPSF4-205ENST00000440514 RPL28P46779 137 aaKnown RBP10.91□□□□□ -0.66
CPSF4-205ENST00000440514 NPC2P61916 151 aa10.9□□□□□ -0.66
CPSF4-205ENST00000440514 ADAMTSL4-AS1Q5T5F5 129 aa10.9□□□□□ -0.66
CPSF4-205ENST00000440514 SPANXB1Q9NS25 103 aaPredicted RBP10.9□□□□□ -0.66
CPSF4-205ENST00000440514 TMEM126AQ9H061 195 aa10.89□□□□□ -0.67
CPSF4-205ENST00000440514 TNXBP22105 4242 aa10.89□□□□□ -0.67
CPSF4-205ENST00000440514 SOSTDC1Q6X4U4 206 aa10.88□□□□□ -0.67
CPSF4-205ENST00000440514 LITAFQ99732 161 aa10.88□□□□□ -0.67
CPSF4-205ENST00000440514 PPDPFQ9H3Y8 114 aa10.88□□□□□ -0.67
CPSF4-205ENST00000440514 EIF4EBP3O60516 100 aaPredicted RBP10.87□□□□□ -0.67
CPSF4-205ENST00000440514 IFITM1P13164 125 aa10.87□□□□□ -0.67
CPSF4-205ENST00000440514 UBE2AP49459 152 aa10.87□□□□□ -0.67
CPSF4-205ENST00000440514 KRTAP13-1Q8IUC0 172 aa10.87□□□□□ -0.67
CPSF4-205ENST00000440514 SPANXCQ9NY87 97 aa10.87□□□□□ -0.67
CPSF4-205ENST00000440514 PRLHP81277 87 aa10.86□□□□□ -0.67
CPSF4-205ENST00000440514 LINC00518Q8N0U6 118 aa10.86□□□□□ -0.67
CPSF4-205ENST00000440514 SPANXDQ9BXN6 97 aa10.86□□□□□ -0.67
CPSF4-205ENST00000440514 PRYO14603 147 aa10.85□□□□□ -0.67
CPSF4-205ENST00000440514 KRTAP1-4P0C5Y4 121 aa10.85□□□□□ -0.67
CPSF4-205ENST00000440514 S100A7L2Q5SY68 101 aa10.85□□□□□ -0.67
CPSF4-205ENST00000440514 FAM19A1Q7Z5A9 133 aa10.85□□□□□ -0.67
CPSF4-205ENST00000440514 LINC00308Q8TCZ7 52 aa10.85□□□□□ -0.67
CPSF4-205ENST00000440514 KRTAP10-8P60410 259 aa10.84□□□□□ -0.67
CPSF4-205ENST00000440514 TRBV10-3A0A0K0K1G6 114 aa10.83□□□□□ -0.68
CPSF4-205ENST00000440514 JOSD1Q15040 202 aaPredicted RBP10.83□□□□□ -0.68
CPSF4-205ENST00000440514 PRR26Q8N8Z3 221 aa10.83□□□□□ -0.68
CPSF4-205ENST00000440514 KCNQ1DNQ9H478 68 aa10.83□□□□□ -0.68
CPSF4-205ENST00000440514 DDTP30046 118 aa10.82□□□□□ -0.68
CPSF4-205ENST00000440514 PCP2Q8IVA1 136 aa10.82□□□□□ -0.68
CPSF4-205ENST00000440514 LINC00337Q8N6G1 96 aa10.8□□□□□ -0.68
CPSF4-205ENST00000440514 HINT1P49773 126 aaPredicted RBP10.79□□□□□ -0.68
CPSF4-205ENST00000440514 VAMP8Q9BV40 100 aa10.79□□□□□ -0.68
CPSF4-205ENST00000440514 TMA7Q9Y2S6 64 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms