RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 KRTDAPP60985 99 aa7.29□□□□□ -1.24
HSPG2-206ENST00000439717 C1orf137Q5JT78 98 aa7.29□□□□□ -1.24
HSPG2-206ENST00000439717 SPINK6Q6UWN8 80 aa7.29□□□□□ -1.24
HSPG2-206ENST00000439717 MRPL55Q7Z7F7 128 aaKnown RBP7.29□□□□□ -1.24
HSPG2-206ENST00000439717 LGALS3P17931 250 aaKnown RBP7.28□□□□□ -1.24
HSPG2-206ENST00000439717 RPL24P83731 157 aaKnown RBP7.28□□□□□ -1.24
HSPG2-206ENST00000439717 SRSF9Q13242 221 aaKnown RBP eCLIP7.28□□□□□ -1.24
HSPG2-206ENST00000439717 MEIG1Q5JSS6 88 aa7.28□□□□□ -1.24
HSPG2-206ENST00000439717 KRTAP11-1Q8IUC1 163 aa7.28□□□□□ -1.24
HSPG2-206ENST00000439717 C20orf202A1L168 122 aa7.27□□□□□ -1.25
HSPG2-206ENST00000439717 S100A6P06703 90 aa7.27□□□□□ -1.25
HSPG2-206ENST00000439717 SMIM13P0DJ93 91 aa7.27□□□□□ -1.25
HSPG2-206ENST00000439717 AKR1D1P51857 326 aa7.27□□□□□ -1.25
HSPG2-206ENST00000439717 NKAPP1Q8N9T2 125 aa7.27□□□□□ -1.25
HSPG2-206ENST00000439717 FLG2Q5D862 2391 aaPredicted RBP7.27□□□□□ -1.25
HSPG2-206ENST00000439717 IGLV7-43P04211 117 aa7.26□□□□□ -1.25
HSPG2-206ENST00000439717 S100A2P29034 98 aa7.26□□□□□ -1.25
HSPG2-206ENST00000439717 HIST3H2BBQ8N257 126 aa7.26□□□□□ -1.25
HSPG2-206ENST00000439717 A0A0U1RRA0 63 aa7.25□□□□□ -1.25
HSPG2-206ENST00000439717 J3QL48 77 aa7.25□□□□□ -1.25
HSPG2-206ENST00000439717 VPREB1P12018 145 aa7.25□□□□□ -1.25
HSPG2-206ENST00000439717 LINC00167Q96N53 147 aa7.25□□□□□ -1.25
HSPG2-206ENST00000439717 MIR7-3HGQ8N6C7 128 aa7.24□□□□□ -1.25
HSPG2-206ENST00000439717 HIST1H2BLQ99880 126 aa7.24□□□□□ -1.25
HSPG2-206ENST00000439717 REG3GQ6UW15 175 aa7.23□□□□□ -1.25
HSPG2-206ENST00000439717 FAT3Q8TDW7 4589 aa7.23□□□□□ -1.25
HSPG2-206ENST00000439717 GAGE10A6NGK3 116 aa7.22□□□□□ -1.25
HSPG2-206ENST00000439717 RPL37AP8A6NKH3 93 aa7.22□□□□□ -1.25
HSPG2-206ENST00000439717 LOC107984156A0A0G2JMH3 177 aa7.21□□□□□ -1.26
HSPG2-206ENST00000439717 A0A0J9YXY3 114 aa7.21□□□□□ -1.26
HSPG2-206ENST00000439717 BCE1O60756 84 aa7.21□□□□□ -1.26
HSPG2-206ENST00000439717 ARL17AQ8IVW1 177 aa7.21□□□□□ -1.26
HSPG2-206ENST00000439717 Q8NDZ9 215 aa7.21□□□□□ -1.26
HSPG2-206ENST00000439717 DIRC1Q969H9 104 aa7.21□□□□□ -1.26
HSPG2-206ENST00000439717 LRP1Q07954 4544 aaKnown RBP7.2□□□□□ -1.26
HSPG2-206ENST00000439717 IGLV1-50A0A075B6I6 118 aa7.2□□□□□ -1.26
HSPG2-206ENST00000439717 SNRPEP62304 92 aaKnown RBP7.2□□□□□ -1.26
HSPG2-206ENST00000439717 BOD1L2Q8IYS8 172 aa7.2□□□□□ -1.26
HSPG2-206ENST00000439717 IGKV2D-26A0A0A0MRZ7 120 aa7.19□□□□□ -1.26
HSPG2-206ENST00000439717 C5orf52A6NGY3 159 aa7.19□□□□□ -1.26
HSPG2-206ENST00000439717 H0Y9J4 135 aa7.19□□□□□ -1.26
HSPG2-206ENST00000439717 M0R378 163 aa7.19□□□□□ -1.26
HSPG2-206ENST00000439717 ZNF861PO60384 105 aa7.19□□□□□ -1.26
HSPG2-206ENST00000439717 LINC01600Q96MT4 127 aa7.19□□□□□ -1.26
HSPG2-206ENST00000439717 IGKV2-28A0A075B6P5 120 aa7.18□□□□□ -1.26
HSPG2-206ENST00000439717 ZNF815PA8K554 130 aa7.18□□□□□ -1.26
HSPG2-206ENST00000439717 TIMM17BO60830 172 aa7.18□□□□□ -1.26
HSPG2-206ENST00000439717 IGKV2D-28P01615 120 aa7.18□□□□□ -1.26
HSPG2-206ENST00000439717 ATOH7Q8N100 152 aa7.18□□□□□ -1.26
HSPG2-206ENST00000439717 DAND5Q8N907 189 aa7.18□□□□□ -1.26
HSPG2-206ENST00000439717 MIEN1Q9BRT3 115 aa7.18□□□□□ -1.26
HSPG2-206ENST00000439717 DMBT1Q9UGM3 2413 aaPredicted RBP7.18□□□□□ -1.26
HSPG2-206ENST00000439717 RPL28P46779 137 aaKnown RBP7.17□□□□□ -1.26
HSPG2-206ENST00000439717 ANKRD39Q53RE8 183 aa7.17□□□□□ -1.26
HSPG2-206ENST00000439717 NDUFC2O95298 119 aa7.16□□□□□ -1.26
HSPG2-206ENST00000439717 MT1HL1P0DM35 61 aa7.16□□□□□ -1.26
HSPG2-206ENST00000439717 ADAMTSL4-AS1Q5T5F5 129 aa7.16□□□□□ -1.26
HSPG2-206ENST00000439717 TRBV10-2A0A0K0K1G8 114 aa7.15□□□□□ -1.26
HSPG2-206ENST00000439717 NCR3O14931 201 aa7.15□□□□□ -1.26
HSPG2-206ENST00000439717 LITAFQ99732 161 aa7.15□□□□□ -1.26
HSPG2-206ENST00000439717 TTTY13Q9BZ97 58 aa7.15□□□□□ -1.26
HSPG2-206ENST00000439717 TMEM126AQ9H061 195 aa7.15□□□□□ -1.26
HSPG2-206ENST00000439717 TMEM238C9JI98 176 aa7.14□□□□□ -1.27
HSPG2-206ENST00000439717 UBE2AP49459 152 aa7.14□□□□□ -1.27
HSPG2-206ENST00000439717 KRTAP13-1Q8IUC0 172 aa7.14□□□□□ -1.27
HSPG2-206ENST00000439717 SPANXB1Q9NS25 103 aaPredicted RBP7.14□□□□□ -1.27
HSPG2-206ENST00000439717 HSBP1L1C9JCN9 74 aa7.13□□□□□ -1.27
HSPG2-206ENST00000439717 PRYO14603 147 aa7.13□□□□□ -1.27
HSPG2-206ENST00000439717 S100A12P80511 92 aa7.13□□□□□ -1.27
HSPG2-206ENST00000439717 SOSTDC1Q6X4U4 206 aa7.13□□□□□ -1.27
HSPG2-206ENST00000439717 SCGB1D4Q6XE38 83 aa7.13□□□□□ -1.27
HSPG2-206ENST00000439717 SCGB1D1O95968 90 aa7.12□□□□□ -1.27
HSPG2-206ENST00000439717 KRTAP10-8P60410 259 aa7.12□□□□□ -1.27
HSPG2-206ENST00000439717 NPC2P61916 151 aa7.12□□□□□ -1.27
HSPG2-206ENST00000439717 FAM19A1Q7Z5A9 133 aa7.12□□□□□ -1.27
HSPG2-206ENST00000439717 LINC00308Q8TCZ7 52 aa7.12□□□□□ -1.27
HSPG2-206ENST00000439717 KCNQ1DNQ9H478 68 aa7.12□□□□□ -1.27
HSPG2-206ENST00000439717 TNXBP22105 4242 aa7.12□□□□□ -1.27
HSPG2-206ENST00000439717 HERC1Q15751 4861 aa7.11□□□□□ -1.27
HSPG2-206ENST00000439717 TRBV10-3A0A0K0K1G6 114 aa7.11□□□□□ -1.27
HSPG2-206ENST00000439717 EIF4EBP3O60516 100 aaPredicted RBP7.11□□□□□ -1.27
HSPG2-206ENST00000439717 PCP2Q8IVA1 136 aa7.11□□□□□ -1.27
HSPG2-206ENST00000439717 COPS9Q8WXC6 57 aa7.11□□□□□ -1.27
HSPG2-206ENST00000439717 SPANXDQ9BXN6 97 aa7.11□□□□□ -1.27
HSPG2-206ENST00000439717 SPANXCQ9NY87 97 aa7.11□□□□□ -1.27
HSPG2-206ENST00000439717 KRTAP1-4P0C5Y4 121 aa7.1□□□□□ -1.27
HSPG2-206ENST00000439717 DDTP30046 118 aa7.1□□□□□ -1.27
HSPG2-206ENST00000439717 SPRR1AP35321 89 aa7.1□□□□□ -1.27
HSPG2-206ENST00000439717 S100A7L2Q5SY68 101 aa7.1□□□□□ -1.27
HSPG2-206ENST00000439717 Q6ZVH6 145 aa7.1□□□□□ -1.27
HSPG2-206ENST00000439717 LINC00337Q8N6G1 96 aa7.1□□□□□ -1.27
HSPG2-206ENST00000439717 PPDPFQ9H3Y8 114 aa7.1□□□□□ -1.27
HSPG2-206ENST00000439717 IGLV6-57P01721 117 aa7.09□□□□□ -1.27
HSPG2-206ENST00000439717 IFITM1P13164 125 aa7.09□□□□□ -1.27
HSPG2-206ENST00000439717 PRLHP81277 87 aa7.09□□□□□ -1.27
HSPG2-206ENST00000439717 CBY1Q9Y3M2 126 aa7.08□□□□□ -1.28
HSPG2-206ENST00000439717 KRTAP4-16G5E9R7 235 aaPredicted RBP7.07□□□□□ -1.28
HSPG2-206ENST00000439717 RPL13AP40429 203 aaKnown RBP7.07□□□□□ -1.28
HSPG2-206ENST00000439717 LINC00518Q8N0U6 118 aa7.07□□□□□ -1.28
HSPG2-206ENST00000439717 PRR26Q8N8Z3 221 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms