RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 RPL24P83731 157 aaKnown RBP8.07□□□□□ -1.12
SCLT1-202ENST00000439369 DAND5Q8N907 189 aa8.07□□□□□ -1.12
SCLT1-202ENST00000439369 PRO1933Q9H354 126 aa8.07□□□□□ -1.12
SCLT1-202ENST00000439369 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.07□□□□□ -1.12
SCLT1-202ENST00000439369 IGLV5-37A0A075B6J1 123 aa8.06□□□□□ -1.12
SCLT1-202ENST00000439369 NDUFC2O95298 119 aa8.06□□□□□ -1.12
SCLT1-202ENST00000439369 CHTF8P0CG12 524 aa8.06□□□□□ -1.12
SCLT1-202ENST00000439369 HNRNPA3P51991 378 aaKnown RBP8.06□□□□□ -1.12
SCLT1-202ENST00000439369 HIST1H4GQ99525 98 aa8.06□□□□□ -1.12
SCLT1-202ENST00000439369 RYR3Q15413 4870 aa8.06□□□□□ -1.12
SCLT1-202ENST00000439369 PLAC8Q9NZF1 115 aa8.05□□□□□ -1.12
SCLT1-202ENST00000439369 PANO1I0J062 215 aa8.04□□□□□ -1.12
SCLT1-202ENST00000439369 HSD52Q0P140 79 aa8.04□□□□□ -1.12
SCLT1-202ENST00000439369 SOSTDC1Q6X4U4 206 aa8.04□□□□□ -1.12
SCLT1-202ENST00000439369 DPH3Q96FX2 82 aa8.04□□□□□ -1.12
SCLT1-202ENST00000439369 TRBV10-2A0A0K0K1G8 114 aa8.03□□□□□ -1.12
SCLT1-202ENST00000439369 VPREB1P12018 145 aa8.03□□□□□ -1.12
SCLT1-202ENST00000439369 MUSTN1Q8IVN3 82 aa8.03□□□□□ -1.12
SCLT1-202ENST00000439369 FAM30AQ9NZY2 134 aa8.03□□□□□ -1.12
SCLT1-202ENST00000439369 A0A087WYN8 130 aa8.02□□□□□ -1.13
SCLT1-202ENST00000439369 A0A1W2PNN7 141 aa8.02□□□□□ -1.13
SCLT1-202ENST00000439369 NKAPP1Q8N9T2 125 aa8.02□□□□□ -1.13
SCLT1-202ENST00000439369 EIF4EBP3O60516 100 aaPredicted RBP8.01□□□□□ -1.13
SCLT1-202ENST00000439369 NPC2P61916 151 aa8.01□□□□□ -1.13
SCLT1-202ENST00000439369 LBHQ53QV2 105 aaPredicted RBP8.01□□□□□ -1.13
SCLT1-202ENST00000439369 SERTAD4-AS1Q5TG53 156 aa8.01□□□□□ -1.13
SCLT1-202ENST00000439369 PKD1P98161 4303 aa8.01□□□□□ -1.13
SCLT1-202ENST00000439369 TMEM238LA0A1B0GVL6 79 aa8□□□□□ -1.13
SCLT1-202ENST00000439369 FAM168BA1KXE4 195 aa8□□□□□ -1.13
SCLT1-202ENST00000439369 A6NJY4 79 aa8□□□□□ -1.13
SCLT1-202ENST00000439369 M0R378 163 aa8□□□□□ -1.13
SCLT1-202ENST00000439369 SCXQ7RTU7 201 aa8□□□□□ -1.13
SCLT1-202ENST00000439369 FAM19A5Q7Z5A7 132 aaPredicted RBP8□□□□□ -1.13
SCLT1-202ENST00000439369 KRTAP7-1Q8IUC3 87 aa8□□□□□ -1.13
SCLT1-202ENST00000439369 CEND1Q8N111 149 aa8□□□□□ -1.13
SCLT1-202ENST00000439369 CIRBP-AS1Q8TBR5 109 aa8□□□□□ -1.13
SCLT1-202ENST00000439369 M0QXV9 152 aa7.99□□□□□ -1.13
SCLT1-202ENST00000439369 CDK2AP2O75956 126 aa7.99□□□□□ -1.13
SCLT1-202ENST00000439369 DDTP30046 118 aa7.99□□□□□ -1.13
SCLT1-202ENST00000439369 MRPL55Q7Z7F7 128 aaKnown RBP7.99□□□□□ -1.13
SCLT1-202ENST00000439369 Q8NDZ9 215 aa7.99□□□□□ -1.13
SCLT1-202ENST00000439369 C22orf24Q9Y442 160 aa7.99□□□□□ -1.13
SCLT1-202ENST00000439369 A4D1N5 150 aa7.98□□□□□ -1.13
SCLT1-202ENST00000439369 M0R143 59 aa7.98□□□□□ -1.13
SCLT1-202ENST00000439369 DNAH11Q96DT5 4516 aa7.98□□□□□ -1.13
SCLT1-202ENST00000439369 LCE2BO14633 110 aa7.97□□□□□ -1.13
SCLT1-202ENST00000439369 CBY1Q9Y3M2 126 aa7.97□□□□□ -1.13
SCLT1-202ENST00000439369 HECTD4Q9Y4D8 3996 aa7.96□□□□□ -1.13
SCLT1-202ENST00000439369 IGKV2-28A0A075B6P5 120 aa7.96□□□□□ -1.14
SCLT1-202ENST00000439369 IGKV2D-28P01615 120 aa7.96□□□□□ -1.14
SCLT1-202ENST00000439369 XGP55808 180 aa7.96□□□□□ -1.14
SCLT1-202ENST00000439369 CTAG1AP78358 180 aa7.96□□□□□ -1.14
SCLT1-202ENST00000439369 C7orf33Q8WU49 177 aa7.96□□□□□ -1.14
SCLT1-202ENST00000439369 TRAV13-2A0A0B4J235 113 aa7.95□□□□□ -1.14
SCLT1-202ENST00000439369 NCR3O14931 201 aa7.95□□□□□ -1.14
SCLT1-202ENST00000439369 PRR3P79522 188 aaKnown RBP7.95□□□□□ -1.14
SCLT1-202ENST00000439369 A0A0B4J2C4 111 aa7.94□□□□□ -1.14
SCLT1-202ENST00000439369 IGLV6-57P01721 117 aa7.94□□□□□ -1.14
SCLT1-202ENST00000439369 FXYD2P54710 66 aa7.94□□□□□ -1.14
SCLT1-202ENST00000439369 LINC00167Q96N53 147 aa7.94□□□□□ -1.14
SCLT1-202ENST00000439369 TMEM126AQ9H061 195 aa7.94□□□□□ -1.14
SCLT1-202ENST00000439369 IGLV1-50A0A075B6I6 118 aa7.93□□□□□ -1.14
SCLT1-202ENST00000439369 A0A1B0GWB2 263 aa7.93□□□□□ -1.14
SCLT1-202ENST00000439369 S100A7L2Q5SY68 101 aa7.93□□□□□ -1.14
SCLT1-202ENST00000439369 BVES-AS1Q5T3Y7 98 aa7.93□□□□□ -1.14
SCLT1-202ENST00000439369 PHF5AQ7RTV0 110 aaKnown RBP7.93□□□□□ -1.14
SCLT1-202ENST00000439369 LINC00337Q8N6G1 96 aa7.93□□□□□ -1.14
SCLT1-202ENST00000439369 CFC1BP0CG36 223 aa7.92□□□□□ -1.14
SCLT1-202ENST00000439369 CFC1P0CG37 223 aa7.92□□□□□ -1.14
SCLT1-202ENST00000439369 UBE2BP63146 152 aa7.92□□□□□ -1.14
SCLT1-202ENST00000439369 C4orf48Q5BLP8 95 aa7.92□□□□□ -1.14
SCLT1-202ENST00000439369 TRBV10-3A0A0K0K1G6 114 aa7.91□□□□□ -1.14
SCLT1-202ENST00000439369 A6NDN8 102 aa7.91□□□□□ -1.14
SCLT1-202ENST00000439369 GAGE10A6NGK3 116 aa7.91□□□□□ -1.14
SCLT1-202ENST00000439369 PRYO14603 147 aa7.91□□□□□ -1.14
SCLT1-202ENST00000439369 OR13C6PQ8NH95 151 aa7.91□□□□□ -1.14
SCLT1-202ENST00000439369 RAB37Q96AX2 223 aa7.91□□□□□ -1.14
SCLT1-202ENST00000439369 KCNQ1DNQ9H478 68 aa7.91□□□□□ -1.14
SCLT1-202ENST00000439369 HINT1P49773 126 aaPredicted RBP7.9□□□□□ -1.14
SCLT1-202ENST00000439369 PKHD1P08F94 4074 aa7.89□□□□□ -1.15
SCLT1-202ENST00000439369 HAMPP81172 84 aa7.89□□□□□ -1.15
SCLT1-202ENST00000439369 NHP2Q9NX24 153 aaKnown RBP7.89□□□□□ -1.15
SCLT1-202ENST00000439369 PRO1854Q9UHT4 67 aa7.89□□□□□ -1.15
SCLT1-202ENST00000439369 TRAV23DV6A0A075B6W5 121 aa7.88□□□□□ -1.15
SCLT1-202ENST00000439369 RPL37AP8A6NKH3 93 aa7.88□□□□□ -1.15
SCLT1-202ENST00000439369 DNAH5Q8TE73 4624 aa7.88□□□□□ -1.15
SCLT1-202ENST00000439369 SPRR1AP35321 89 aa7.87□□□□□ -1.15
SCLT1-202ENST00000439369 RPL13AP40429 203 aaKnown RBP7.87□□□□□ -1.15
SCLT1-202ENST00000439369 REG3GQ6UW15 175 aa7.87□□□□□ -1.15
SCLT1-202ENST00000439369 LINC00528Q8N1L1 170 aa7.86□□□□□ -1.15
SCLT1-202ENST00000439369 PSORS1C2Q9UIG4 136 aa7.86□□□□□ -1.15
SCLT1-202ENST00000439369 TRBV7-6A0A0J9YX20 115 aa7.85□□□□□ -1.15
SCLT1-202ENST00000439369 PCP4L1A6NKN8 68 aa7.85□□□□□ -1.15
SCLT1-202ENST00000439369 ZNF73O43830 326 aaPredicted RBP7.85□□□□□ -1.15
SCLT1-202ENST00000439369 BCE1O60756 84 aa7.85□□□□□ -1.15
SCLT1-202ENST00000439369 KRTAP11-1Q8IUC1 163 aa7.85□□□□□ -1.15
SCLT1-202ENST00000439369 RPL28P46779 137 aaKnown RBP7.84□□□□□ -1.15
SCLT1-202ENST00000439369 SMIM11BQ8TCY0 68 aa7.84□□□□□ -1.15
SCLT1-202ENST00000439369 DIRC1Q969H9 104 aa7.84□□□□□ -1.15
SCLT1-202ENST00000439369 DYNC1H1Q14204 4646 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms