RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 C6orf99Q4VX62 202 aa9.33□□□□□ -0.92
PCNX3-202ENST00000439247 C16orf74Q96GX8 76 aa9.32□□□□□ -0.92
PCNX3-202ENST00000439247 TRRAPQ9Y4A5 3859 aa9.32□□□□□ -0.92
PCNX3-202ENST00000439247 KRTAP10-3P60369 221 aa9.31□□□□□ -0.92
PCNX3-202ENST00000439247 WIPF1O43516 503 aa9.31□□□□□ -0.92
PCNX3-202ENST00000439247 LINC00167Q96N53 147 aa9.31□□□□□ -0.92
PCNX3-202ENST00000439247 C16orf95Q9H693 158 aa9.31□□□□□ -0.92
PCNX3-202ENST00000439247 JMJD7-PLA2G4BH0Y9G9 81 aa9.3□□□□□ -0.92
PCNX3-202ENST00000439247 TMEM256-PLSCR3K7ERE1 68 aa9.3□□□□□ -0.92
PCNX3-202ENST00000439247 LINC00269Q8N2A0 174 aa9.3□□□□□ -0.92
PCNX3-202ENST00000439247 GYPEP15421 78 aa9.29□□□□□ -0.92
PCNX3-202ENST00000439247 CSNK1G2-AS1Q8NCQ2 148 aa9.29□□□□□ -0.92
PCNX3-202ENST00000439247 UBL5Q9BZL1 73 aa9.28□□□□□ -0.92
PCNX3-202ENST00000439247 TRAV10A0A0B4J240 114 aa9.27□□□□□ -0.92
PCNX3-202ENST00000439247 Q8IZM0 81 aa9.27□□□□□ -0.92
PCNX3-202ENST00000439247 SNURFQ9Y675 71 aa9.27□□□□□ -0.92
PCNX3-202ENST00000439247 HAMPP81172 84 aa9.27□□□□□ -0.93
PCNX3-202ENST00000439247 KIAA0087Q14695 138 aa9.26□□□□□ -0.93
PCNX3-202ENST00000439247 S100A7L2Q5SY68 101 aa9.26□□□□□ -0.93
PCNX3-202ENST00000439247 LYPD5Q6UWN5 251 aa9.26□□□□□ -0.93
PCNX3-202ENST00000439247 C19orf73Q9NVV2 129 aa9.26□□□□□ -0.93
PCNX3-202ENST00000439247 C6orf223Q8N319 242 aa9.26□□□□□ -0.93
PCNX3-202ENST00000439247 LAMTOR3Q9UHA4 124 aa9.26□□□□□ -0.93
PCNX3-202ENST00000439247 SCXQ7RTU7 201 aa9.25□□□□□ -0.93
PCNX3-202ENST00000439247 Q6ZQT0 140 aa9.25□□□□□ -0.93
PCNX3-202ENST00000439247 C10orf25Q5T742 122 aa9.25□□□□□ -0.93
PCNX3-202ENST00000439247 RBM3P98179 157 aaKnown RBP9.24□□□□□ -0.93
PCNX3-202ENST00000439247 LINC01547P58512 204 aaPredicted RBP9.23□□□□□ -0.93
PCNX3-202ENST00000439247 LINC00575Q6W349 94 aa9.23□□□□□ -0.93
PCNX3-202ENST00000439247 RMI2Q96E14 147 aa9.23□□□□□ -0.93
PCNX3-202ENST00000439247 FAM236DA0A1B0GTK5 79 aa9.23□□□□□ -0.93
PCNX3-202ENST00000439247 H7BZZ5 65 aa9.23□□□□□ -0.93
PCNX3-202ENST00000439247 FAM236CP0DP71 79 aa9.23□□□□□ -0.93
PCNX3-202ENST00000439247 ATP5EP2Q5VTU8 51 aa9.23□□□□□ -0.93
PCNX3-202ENST00000439247 STAB1Q9NY15 2570 aa9.23□□□□□ -0.93
PCNX3-202ENST00000439247 DEFB4AO15263 64 aa9.22□□□□□ -0.93
PCNX3-202ENST00000439247 NDUFC2O95298 119 aa9.22□□□□□ -0.93
PCNX3-202ENST00000439247 CHCHD10Q8WYQ3 142 aaPredicted RBP9.22□□□□□ -0.93
PCNX3-202ENST00000439247 UNQ6190/PRO20217Q6UXQ8 127 aa9.21□□□□□ -0.93
PCNX3-202ENST00000439247 Q6ZVQ6 151 aa9.21□□□□□ -0.93
PCNX3-202ENST00000439247 Q6ZQY7 126 aa9.21□□□□□ -0.94
PCNX3-202ENST00000439247 ANGP03950 147 aaKnown RBP9.2□□□□□ -0.94
PCNX3-202ENST00000439247 COL6A5A8TX70 2615 aa9.19□□□□□ -0.94
PCNX3-202ENST00000439247 A0A1B0GUV1 79 aa9.19□□□□□ -0.94
PCNX3-202ENST00000439247 KRTAP24-1Q3LI83 254 aa9.18□□□□□ -0.94
PCNX3-202ENST00000439247 IGLV1-51P01701 117 aa9.18□□□□□ -0.94
PCNX3-202ENST00000439247 CD164L2Q6UWJ8 174 aa9.18□□□□□ -0.94
PCNX3-202ENST00000439247 TRBV10-3A0A0K0K1G6 114 aa9.17□□□□□ -0.94
PCNX3-202ENST00000439247 ZNF561-AS1K7EIQ3 104 aa9.17□□□□□ -0.94
PCNX3-202ENST00000439247 REG3AQ06141 175 aa9.17□□□□□ -0.94
PCNX3-202ENST00000439247 TRAV7A0A075B6U4 112 aa9.17□□□□□ -0.94
PCNX3-202ENST00000439247 F8WEM9 126 aa9.17□□□□□ -0.94
PCNX3-202ENST00000439247 TM2D3Q9BRN9 247 aa9.17□□□□□ -0.94
PCNX3-202ENST00000439247 NDUFC2-KCTD14E9PQ53 114 aa9.16□□□□□ -0.94
PCNX3-202ENST00000439247 LINC00482Q8N8I6 264 aa9.16□□□□□ -0.94
PCNX3-202ENST00000439247 XAGE1AQ9HD64 81 aa9.16□□□□□ -0.94
PCNX3-202ENST00000439247 PKD1L1Q8TDX9 2849 aa9.16□□□□□ -0.94
PCNX3-202ENST00000439247 COX17Q14061 63 aa9.15□□□□□ -0.94
PCNX3-202ENST00000439247 LINC00336Q6ZUF6 198 aa9.15□□□□□ -0.94
PCNX3-202ENST00000439247 LOC110117498A0A087WWA1 95 aa9.14□□□□□ -0.95
PCNX3-202ENST00000439247 Q8N9L7 120 aa9.14□□□□□ -0.95
PCNX3-202ENST00000439247 IGHV4-28A0A0C4DH34 117 aa9.14□□□□□ -0.95
PCNX3-202ENST00000439247 PRO0255Q9UI72 69 aa9.14□□□□□ -0.95
PCNX3-202ENST00000439247 LINC00474Q9P2X8 69 aa9.13□□□□□ -0.95
PCNX3-202ENST00000439247 SPAG11BQ08648 103 aa9.13□□□□□ -0.95
PCNX3-202ENST00000439247 MUC7Q8TAX7 377 aa9.12□□□□□ -0.95
PCNX3-202ENST00000439247 X6R8D5 127 aa9.12□□□□□ -0.95
PCNX3-202ENST00000439247 FP248Q71RG6 208 aaPredicted RBP9.12□□□□□ -0.95
PCNX3-202ENST00000439247 SERP1Q9Y6X1 66 aa9.12□□□□□ -0.95
PCNX3-202ENST00000439247 KLKP1Q107X0 134 aa9.11□□□□□ -0.95
PCNX3-202ENST00000439247 IGLV6-57P01721 117 aa9.11□□□□□ -0.95
PCNX3-202ENST00000439247 EPM2AB3EWF7 344 aa9.1□□□□□ -0.95
PCNX3-202ENST00000439247 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.1□□□□□ -0.95
PCNX3-202ENST00000439247 CMYA5Q8N3K9 4069 aa9.1□□□□□ -0.95
PCNX3-202ENST00000439247 LINC00612Q8N6U2 182 aa9.1□□□□□ -0.95
PCNX3-202ENST00000439247 CMC4P56277 68 aaPredicted RBP9.09□□□□□ -0.95
PCNX3-202ENST00000439247 HTN3P15516 51 aa9.08□□□□□ -0.96
PCNX3-202ENST00000439247 KLK12Q9UKR0 248 aa9.08□□□□□ -0.96
PCNX3-202ENST00000439247 DEFB135Q30KP9 77 aa9.07□□□□□ -0.96
PCNX3-202ENST00000439247 CXCL6P80162 114 aa9.06□□□□□ -0.96
PCNX3-202ENST00000439247 C9orf66Q5T8R8 295 aa9.06□□□□□ -0.96
PCNX3-202ENST00000439247 C6orf48Q9UBA6 75 aa9.06□□□□□ -0.96
PCNX3-202ENST00000439247 TRBV7-4A0A0J9YYF1 115 aa9.05□□□□□ -0.96
PCNX3-202ENST00000439247 DIRC1Q969H9 104 aa9.05□□□□□ -0.96
PCNX3-202ENST00000439247 ANK2Q01484 3957 aa9.05□□□□□ -0.96
PCNX3-202ENST00000439247 CELA1Q9UNI1 258 aa9.05□□□□□ -0.96
PCNX3-202ENST00000439247 TRBV7-6A0A0J9YX20 115 aa9.05□□□□□ -0.96
PCNX3-202ENST00000439247 ZNF73O43830 326 aaPredicted RBP9.05□□□□□ -0.96
PCNX3-202ENST00000439247 BPY2O14599 106 aa9.04□□□□□ -0.96
PCNX3-202ENST00000439247 NREPQ16612 68 aa9.04□□□□□ -0.96
PCNX3-202ENST00000439247 FAM229BQ4G0N7 80 aa9.04□□□□□ -0.96
PCNX3-202ENST00000439247 HIGD2BQ4VC39 106 aa9.04□□□□□ -0.96
PCNX3-202ENST00000439247 MIFP14174 115 aa9.03□□□□□ -0.96
PCNX3-202ENST00000439247 A0A0J9YWU9 116 aa9.03□□□□□ -0.96
PCNX3-202ENST00000439247 IGHV4-30-4P0DP06 118 aa9.03□□□□□ -0.96
PCNX3-202ENST00000439247 COX7BP24311 80 aa9.02□□□□□ -0.97
PCNX3-202ENST00000439247 BCE1O60756 84 aa9.02□□□□□ -0.97
PCNX3-202ENST00000439247 PKIGQ9Y2B9 76 aa9.01□□□□□ -0.97
PCNX3-202ENST00000439247 C3orf84H3BNL1 204 aa9.01□□□□□ -0.97
PCNX3-202ENST00000439247 DAD1P61803 113 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms