RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 C2orf48Q96LS8 159 aa10.51□□□□□ -0.73
TSC2-206ENST00000439117 IGHV3OR16-9A0A0B4J2B5 98 aa10.5□□□□□ -0.73
TSC2-206ENST00000439117 FAM19A4Q96LR4 140 aa10.49□□□□□ -0.73
TSC2-206ENST00000439117 NHLRC4P0CG21 123 aaPredicted RBP10.49□□□□□ -0.73
TSC2-206ENST00000439117 M0R2N4 97 aa10.49□□□□□ -0.73
TSC2-206ENST00000439117 C7orf33Q8WU49 177 aa10.49□□□□□ -0.73
TSC2-206ENST00000439117 IGHV6-1A0A0B4J1U7 121 aa10.49□□□□□ -0.73
TSC2-206ENST00000439117 LOC110117498A0A087WWA1 95 aa10.48□□□□□ -0.73
TSC2-206ENST00000439117 VPREB1P12018 145 aa10.48□□□□□ -0.73
TSC2-206ENST00000439117 H3BPC8 53 aa10.48□□□□□ -0.73
TSC2-206ENST00000439117 Q9BRP9 147 aa10.48□□□□□ -0.73
TSC2-206ENST00000439117 F8P00451 2351 aa10.47□□□□□ -0.73
TSC2-206ENST00000439117 Q6ZQT0 140 aa10.47□□□□□ -0.73
TSC2-206ENST00000439117 Q6ZTC4 211 aa10.47□□□□□ -0.73
TSC2-206ENST00000439117 C6orf223Q8N319 242 aa10.46□□□□□ -0.73
TSC2-206ENST00000439117 PCSK5Q92824 1860 aa10.46□□□□□ -0.73
TSC2-206ENST00000439117 LY6G6CO95867 125 aa10.45□□□□□ -0.74
TSC2-206ENST00000439117 SPAG11AQ6PDA7 123 aa10.44□□□□□ -0.74
TSC2-206ENST00000439117 TM2D3Q9BRN9 247 aa10.44□□□□□ -0.74
TSC2-206ENST00000439117 NUPR2A6NF83 97 aa10.44□□□□□ -0.74
TSC2-206ENST00000439117 DEFB116Q30KQ4 102 aa10.44□□□□□ -0.74
TSC2-206ENST00000439117 ERC2-IT1O76042 136 aa10.43□□□□□ -0.74
TSC2-206ENST00000439117 Q9UF83 564 aa10.43□□□□□ -0.74
TSC2-206ENST00000439117 TP53AIP1Q9HCN2 124 aa10.43□□□□□ -0.74
TSC2-206ENST00000439117 FHL3Q13643 280 aa10.43□□□□□ -0.74
TSC2-206ENST00000439117 SMCR5Q8TEV8 140 aa10.42□□□□□ -0.74
TSC2-206ENST00000439117 HECTD1Q9ULT8 2610 aa10.42□□□□□ -0.74
TSC2-206ENST00000439117 A0A1B0GU69 56 aa10.41□□□□□ -0.74
TSC2-206ENST00000439117 KIAA0087Q14695 138 aa10.41□□□□□ -0.74
TSC2-206ENST00000439117 CHD7Q9P2D1 2997 aa10.4□□□□□ -0.74
TSC2-206ENST00000439117 C11orf72Q8NBR9 251 aa10.4□□□□□ -0.75
TSC2-206ENST00000439117 LITAFQ99732 161 aa10.38□□□□□ -0.75
TSC2-206ENST00000439117 C8orf87E5RJ46 101 aa10.38□□□□□ -0.75
TSC2-206ENST00000439117 CYP4F30PQ9H0H9 118 aa10.38□□□□□ -0.75
TSC2-206ENST00000439117 KLKP1Q107X0 134 aa10.37□□□□□ -0.75
TSC2-206ENST00000439117 Q6ZRU5 148 aa10.37□□□□□ -0.75
TSC2-206ENST00000439117 LINC00336Q6ZUF6 198 aa10.37□□□□□ -0.75
TSC2-206ENST00000439117 FSHBP01225 129 aa10.37□□□□□ -0.75
TSC2-206ENST00000439117 CD164Q04900 197 aa10.36□□□□□ -0.75
TSC2-206ENST00000439117 ACYP2P14621 99 aa10.36□□□□□ -0.75
TSC2-206ENST00000439117 Q8NBF4 154 aa10.35□□□□□ -0.75
TSC2-206ENST00000439117 ELOF1P60002 83 aaKnown RBP10.35□□□□□ -0.75
TSC2-206ENST00000439117 SPINK1P00995 79 aa10.34□□□□□ -0.75
TSC2-206ENST00000439117 LYPD5Q6UWN5 251 aa10.33□□□□□ -0.76
TSC2-206ENST00000439117 MUC4Q99102 2169 aa10.32□□□□□ -0.76
TSC2-206ENST00000439117 CIRBP-AS1Q8TBR5 109 aa10.31□□□□□ -0.76
TSC2-206ENST00000439117 COL27A1Q8IZC6 1860 aaPredicted RBP10.31□□□□□ -0.76
TSC2-206ENST00000439117 TRAV22A0A0B4J277 110 aa10.31□□□□□ -0.76
TSC2-206ENST00000439117 A8MUN3 132 aa10.31□□□□□ -0.76
TSC2-206ENST00000439117 KRTAP24-1Q3LI83 254 aa10.31□□□□□ -0.76
TSC2-206ENST00000439117 ATP11AUNQ6ZP68 121 aa10.3□□□□□ -0.76
TSC2-206ENST00000439117 C22orf24Q9Y442 160 aa10.29□□□□□ -0.76
TSC2-206ENST00000439117 KLK9Q2XQG4 91 aa10.29□□□□□ -0.76
TSC2-206ENST00000439117 PRLHP81277 87 aa10.28□□□□□ -0.76
TSC2-206ENST00000439117 CHD9Q3L8U1 2897 aa10.27□□□□□ -0.77
TSC2-206ENST00000439117 PCNTO95613 3336 aa10.27□□□□□ -0.77
TSC2-206ENST00000439117 H7BZZ5 65 aa10.26□□□□□ -0.77
TSC2-206ENST00000439117 WIPF1O43516 503 aa10.26□□□□□ -0.77
TSC2-206ENST00000439117 C6orf48Q9UBA6 75 aa10.26□□□□□ -0.77
TSC2-206ENST00000439117 HTTP42858 3142 aa10.26□□□□□ -0.77
TSC2-206ENST00000439117 RANBP2P49792 3224 aaKnown RBP10.26□□□□□ -0.77
TSC2-206ENST00000439117 RETNLBQ9BQ08 111 aa10.24□□□□□ -0.77
TSC2-206ENST00000439117 X6R8D5 127 aa10.23□□□□□ -0.77
TSC2-206ENST00000439117 LINC00167Q96N53 147 aa10.22□□□□□ -0.77
TSC2-206ENST00000439117 Q6ZRX8 168 aa10.21□□□□□ -0.78
TSC2-206ENST00000439117 LINC01556Q5JQF7 62 aa10.21□□□□□ -0.78
TSC2-206ENST00000439117 LINC00476Q8WZB0 136 aa10.21□□□□□ -0.78
TSC2-206ENST00000439117 A0A096LNT2 108 aa10.2□□□□□ -0.78
TSC2-206ENST00000439117 TRBV7-4A0A0J9YYF1 115 aa10.2□□□□□ -0.78
TSC2-206ENST00000439117 LOC101927531A0A1B0GV80 90 aa10.2□□□□□ -0.78
TSC2-206ENST00000439117 IGLV5-52A0A0A0MRZ9 124 aa10.2□□□□□ -0.78
TSC2-206ENST00000439117 C5orf42Q9H799 3197 aa10.19□□□□□ -0.78
TSC2-206ENST00000439117 KTN1-AS1Q86SY8 53 aa10.19□□□□□ -0.78
TSC2-206ENST00000439117 C1orf134Q5TEV5 83 aa10.19□□□□□ -0.78
TSC2-206ENST00000439117 IGKV2D-30A0A075B6S6 120 aa10.19□□□□□ -0.78
TSC2-206ENST00000439117 IGKV2-30P06310 120 aa10.19□□□□□ -0.78
TSC2-206ENST00000439117 C7orf65Q6ZTY9 151 aa10.18□□□□□ -0.78
TSC2-206ENST00000439117 COA5Q86WW8 74 aa10.18□□□□□ -0.78
TSC2-206ENST00000439117 IGLV6-57P01721 117 aa10.16□□□□□ -0.78
TSC2-206ENST00000439117 MGAM2Q2M2H8 2515 aa10.16□□□□□ -0.78
TSC2-206ENST00000439117 GVQW2A0A096LPI5 108 aaPredicted RBP10.15□□□□□ -0.78
TSC2-206ENST00000439117 USP24Q9UPU5 2620 aa10.15□□□□□ -0.78
TSC2-206ENST00000439117 H3BNG1 76 aa10.15□□□□□ -0.79
TSC2-206ENST00000439117 HELZ2Q9BYK8 2649 aaKnown RBP10.14□□□□□ -0.79
TSC2-206ENST00000439117 LCA10Q71F78 164 aa10.14□□□□□ -0.79
TSC2-206ENST00000439117 MOBPQ13875 183 aa10.14□□□□□ -0.79
TSC2-206ENST00000439117 EIF4EBP3O60516 100 aaPredicted RBP10.13□□□□□ -0.79
TSC2-206ENST00000439117 K7EQZ3 153 aa10.12□□□□□ -0.79
TSC2-206ENST00000439117 UQCR11O14957 56 aa10.12□□□□□ -0.79
TSC2-206ENST00000439117 Q8NAQ8 132 aa10.11□□□□□ -0.79
TSC2-206ENST00000439117 MDFIQ99750 246 aa10.11□□□□□ -0.79
TSC2-206ENST00000439117 LINC01600Q96MT4 127 aa10.1□□□□□ -0.79
TSC2-206ENST00000439117 A8MWP4 228 aa10.1□□□□□ -0.79
TSC2-206ENST00000439117 FLNAP21333 2647 aaKnown RBP10.09□□□□□ -0.79
TSC2-206ENST00000439117 CENPEQ02224 2701 aa10.08□□□□□ -0.8
TSC2-206ENST00000439117 SPINT4Q6UDR6 99 aa10.07□□□□□ -0.8
TSC2-206ENST00000439117 PRR15Q8IV56 129 aa10.07□□□□□ -0.8
TSC2-206ENST00000439117 ST20-AS1Q8NBB2 130 aa10.07□□□□□ -0.8
TSC2-206ENST00000439117 TRANK1O15050 2925 aa10.07□□□□□ -0.8
TSC2-206ENST00000439117 RPL37AP61513 92 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms