RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 NDUFA1O15239 70 aa8.73□□□□□ -1.01
LINC01088-201ENST00000437737 SPAG11BQ08648 103 aa8.73□□□□□ -1.01
LINC01088-201ENST00000437737 C2orf48Q96LS8 159 aa8.73□□□□□ -1.01
LINC01088-201ENST00000437737 GVQW2A0A096LPI5 108 aaPredicted RBP8.72□□□□□ -1.01
LINC01088-201ENST00000437737 HIGD2BQ4VC39 106 aa8.72□□□□□ -1.01
LINC01088-201ENST00000437737 SCGB1D4Q6XE38 83 aa8.72□□□□□ -1.01
LINC01088-201ENST00000437737 PCP2Q8IVA1 136 aa8.72□□□□□ -1.01
LINC01088-201ENST00000437737 C15orf56Q8N910 161 aa8.72□□□□□ -1.01
LINC01088-201ENST00000437737 MIEN1Q9BRT3 115 aa8.72□□□□□ -1.01
LINC01088-201ENST00000437737 A0A096LNI7 61 aa8.71□□□□□ -1.02
LINC01088-201ENST00000437737 TSPEAR-AS2P59090 65 aa8.71□□□□□ -1.02
LINC01088-201ENST00000437737 SRSF9Q13242 221 aaKnown RBP eCLIP8.71□□□□□ -1.02
LINC01088-201ENST00000437737 KIAA0087Q14695 138 aa8.71□□□□□ -1.02
LINC01088-201ENST00000437737 Q6ZRP5 223 aa8.71□□□□□ -1.02
LINC01088-201ENST00000437737 ZNF625Q96I27 306 aaPredicted RBP8.7□□□□□ -1.02
LINC01088-201ENST00000437737 PRO1933Q9H354 126 aa8.7□□□□□ -1.02
LINC01088-201ENST00000437737 MUC2Q02817 5179 aa8.69□□□□□ -1.02
LINC01088-201ENST00000437737 A0A0U1RQV1 116 aa8.69□□□□□ -1.02
LINC01088-201ENST00000437737 CAMK2N2Q96S95 79 aa8.69□□□□□ -1.02
LINC01088-201ENST00000437737 TTTY13Q9BZ97 58 aa8.68□□□□□ -1.02
LINC01088-201ENST00000437737 HIGD1BQ9P298 99 aa8.68□□□□□ -1.02
LINC01088-201ENST00000437737 LINC00474Q9P2X8 69 aa8.68□□□□□ -1.02
LINC01088-201ENST00000437737 A0A0J9YXY3 114 aa8.67□□□□□ -1.02
LINC01088-201ENST00000437737 TRBV30A0A0K0K1B3 111 aa8.67□□□□□ -1.02
LINC01088-201ENST00000437737 KRTAP9-6A0A140TA67 174 aa8.67□□□□□ -1.02
LINC01088-201ENST00000437737 TIMM17BO60830 172 aa8.67□□□□□ -1.02
LINC01088-201ENST00000437737 COX17Q14061 63 aa8.67□□□□□ -1.02
LINC01088-201ENST00000437737 MEIG1Q5JSS6 88 aa8.67□□□□□ -1.02
LINC01088-201ENST00000437737 TMEM238C9JI98 176 aa8.66□□□□□ -1.02
LINC01088-201ENST00000437737 SYCNQ0VAF6 134 aa8.66□□□□□ -1.02
LINC01088-201ENST00000437737 RNF151Q2KHN1 245 aa8.66□□□□□ -1.02
LINC01088-201ENST00000437737 Q6ZVH6 145 aa8.66□□□□□ -1.02
LINC01088-201ENST00000437737 PKIGQ9Y2B9 76 aa8.66□□□□□ -1.02
LINC01088-201ENST00000437737 FAT4Q6V0I7 4981 aa8.65□□□□□ -1.02
LINC01088-201ENST00000437737 C2orf82Q6UX34 121 aa8.65□□□□□ -1.02
LINC01088-201ENST00000437737 COPS9Q8WXC6 57 aa8.65□□□□□ -1.02
LINC01088-201ENST00000437737 UNQ6190/PRO20217Q6UXQ8 127 aa8.64□□□□□ -1.03
LINC01088-201ENST00000437737 CARD19Q96LW7 228 aa8.64□□□□□ -1.03
LINC01088-201ENST00000437737 SPANXB1Q9NS25 103 aaPredicted RBP8.64□□□□□ -1.03
LINC01088-201ENST00000437737 DDTP30046 118 aa8.63□□□□□ -1.03
LINC01088-201ENST00000437737 LINC00158P58513 81 aa8.63□□□□□ -1.03
LINC01088-201ENST00000437737 TAL2Q16559 108 aa8.63□□□□□ -1.03
LINC01088-201ENST00000437737 LINC00526Q96FQ7 95 aa8.63□□□□□ -1.03
LINC01088-201ENST00000437737 ERG28Q9UKR5 140 aa8.63□□□□□ -1.03
LINC01088-201ENST00000437737 C2orf91Q6ZV80 131 aa8.62□□□□□ -1.03
LINC01088-201ENST00000437737 PSORS1C2Q9UIG4 136 aa8.62□□□□□ -1.03
LINC01088-201ENST00000437737 IFITM1P13164 125 aa8.61□□□□□ -1.03
LINC01088-201ENST00000437737 HIST1H4GQ99525 98 aa8.61□□□□□ -1.03
LINC01088-201ENST00000437737 SPANXDQ9BXN6 97 aa8.61□□□□□ -1.03
LINC01088-201ENST00000437737 SPANXCQ9NY87 97 aa8.61□□□□□ -1.03
LINC01088-201ENST00000437737 SMIM13P0DJ93 91 aa8.6□□□□□ -1.03
LINC01088-201ENST00000437737 PFN2P35080 140 aa8.6□□□□□ -1.03
LINC01088-201ENST00000437737 HSD52Q0P140 79 aa8.6□□□□□ -1.03
LINC01088-201ENST00000437737 C10orf25Q5T742 122 aa8.6□□□□□ -1.03
LINC01088-201ENST00000437737 C6orf48Q9UBA6 75 aa8.6□□□□□ -1.03
LINC01088-201ENST00000437737 PTTG1IPP53801 180 aa8.59□□□□□ -1.03
LINC01088-201ENST00000437737 PRR4Q16378 134 aa8.59□□□□□ -1.03
LINC01088-201ENST00000437737 PRR26Q8N8Z3 221 aa8.59□□□□□ -1.03
LINC01088-201ENST00000437737 LITAFQ99732 161 aa8.59□□□□□ -1.03
LINC01088-201ENST00000437737 PPDPFQ9H3Y8 114 aa8.59□□□□□ -1.03
LINC01088-201ENST00000437737 TP73-AS1Q9UF72 201 aa8.59□□□□□ -1.03
LINC01088-201ENST00000437737 PCP4L1A6NKN8 68 aa8.58□□□□□ -1.04
LINC01088-201ENST00000437737 NDUFC2-KCTD14E9PQ53 114 aa8.58□□□□□ -1.04
LINC01088-201ENST00000437737 M0R143 59 aa8.58□□□□□ -1.04
LINC01088-201ENST00000437737 TLX1NBP0CAT3 122 aa8.58□□□□□ -1.04
LINC01088-201ENST00000437737 A0A0U1RRA0 63 aa8.57□□□□□ -1.04
LINC01088-201ENST00000437737 CTAG1AP78358 180 aa8.57□□□□□ -1.04
LINC01088-201ENST00000437737 GAGE2BQ13066 116 aa8.57□□□□□ -1.04
LINC01088-201ENST00000437737 MIR7-3HGQ8N6C7 128 aa8.57□□□□□ -1.04
LINC01088-201ENST00000437737 LOC107984640A0A0U1RRK4 108 aa8.56□□□□□ -1.04
LINC01088-201ENST00000437737 TMEM238LA0A1B0GVL6 79 aa8.56□□□□□ -1.04
LINC01088-201ENST00000437737 A6NJY4 79 aa8.56□□□□□ -1.04
LINC01088-201ENST00000437737 RPL24P83731 157 aaKnown RBP8.56□□□□□ -1.04
LINC01088-201ENST00000437737 C9orf116Q5BN46 136 aaPredicted RBP8.56□□□□□ -1.04
LINC01088-201ENST00000437737 C1orf137Q5JT78 98 aa8.56□□□□□ -1.04
LINC01088-201ENST00000437737 ADAMTSL4-AS1Q5T5F5 129 aa8.56□□□□□ -1.04
LINC01088-201ENST00000437737 CEND1Q8N111 149 aa8.56□□□□□ -1.04
LINC01088-201ENST00000437737 LOC107984156A0A0G2JMH3 177 aa8.54□□□□□ -1.04
LINC01088-201ENST00000437737 MUSTN1Q8IVN3 82 aa8.54□□□□□ -1.04
LINC01088-201ENST00000437737 ARL17AQ8IVW1 177 aa8.54□□□□□ -1.04
LINC01088-201ENST00000437737 LINC00308Q8TCZ7 52 aa8.54□□□□□ -1.04
LINC01088-201ENST00000437737 A0A1W2PNN7 141 aa8.53□□□□□ -1.04
LINC01088-201ENST00000437737 LCE2AQ5TA79 106 aaPredicted RBP8.53□□□□□ -1.04
LINC01088-201ENST00000437737 DAND5Q8N907 189 aa8.53□□□□□ -1.04
LINC01088-201ENST00000437737 DIRC1Q969H9 104 aa8.53□□□□□ -1.04
LINC01088-201ENST00000437737 SND1-IT1Q9HBX3 110 aa8.53□□□□□ -1.04
LINC01088-201ENST00000437737 RPL18AQ02543 176 aaKnown RBP8.52□□□□□ -1.05
LINC01088-201ENST00000437737 IGLV1-50A0A075B6I6 118 aa8.5□□□□□ -1.05
LINC01088-201ENST00000437737 A6NDN8 102 aa8.5□□□□□ -1.05
LINC01088-201ENST00000437737 NDUFC2O95298 119 aa8.5□□□□□ -1.05
LINC01088-201ENST00000437737 IGLV7-43P04211 117 aa8.5□□□□□ -1.05
LINC01088-201ENST00000437737 HINT1P49773 126 aaPredicted RBP8.5□□□□□ -1.05
LINC01088-201ENST00000437737 GAGE2EQ4V326 116 aa8.5□□□□□ -1.05
LINC01088-201ENST00000437737 BVES-AS1Q5T3Y7 98 aa8.5□□□□□ -1.05
LINC01088-201ENST00000437737 PHF5AQ7RTV0 110 aaKnown RBP8.5□□□□□ -1.05
LINC01088-201ENST00000437737 GAGE2DQ9UEU5 116 aa8.5□□□□□ -1.05
LINC01088-201ENST00000437737 H0Y9J4 135 aa8.49□□□□□ -1.05
LINC01088-201ENST00000437737 NPC2P61916 151 aa8.49□□□□□ -1.05
LINC01088-201ENST00000437737 A4D1N5 150 aa8.48□□□□□ -1.05
LINC01088-201ENST00000437737 SOSTDC1Q6X4U4 206 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms