RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 K7EQZ3 153 aa4.11□□□□□ -1.75
MCF2-205ENST00000437564 EGFEM1PQ0D2K5 195 aa4.11□□□□□ -1.75
MCF2-205ENST00000437564 PCNTO95613 3336 aa4.11□□□□□ -1.75
MCF2-205ENST00000437564 IGLV5-37A0A075B6J1 123 aa4.11□□□□□ -1.75
MCF2-205ENST00000437564 IGHV4-28A0A0C4DH34 117 aa4.11□□□□□ -1.75
MCF2-205ENST00000437564 DEFB113Q30KQ7 82 aa4.1□□□□□ -1.75
MCF2-205ENST00000437564 MINOS1Q5TGZ0 78 aa4.1□□□□□ -1.75
MCF2-205ENST00000437564 HRES1P13985 223 aa4.09□□□□□ -1.75
MCF2-205ENST00000437564 LYPD2Q6UXB3 125 aa4.09□□□□□ -1.75
MCF2-205ENST00000437564 CENPFP49454 3210 aa4.09□□□□□ -1.75
MCF2-205ENST00000437564 KRTAP29-1A8MX34 341 aaPredicted RBP4.09□□□□□ -1.76
MCF2-205ENST00000437564 KRTAP4-16G5E9R7 235 aaPredicted RBP4.09□□□□□ -1.76
MCF2-205ENST00000437564 DNAH10OSP0CZ25 163 aa4.09□□□□□ -1.76
MCF2-205ENST00000437564 NUPR2A6NF83 97 aa4.08□□□□□ -1.76
MCF2-205ENST00000437564 ODF3BA8MYP8 253 aa4.08□□□□□ -1.76
MCF2-205ENST00000437564 PROK1P58294 105 aa4.08□□□□□ -1.76
MCF2-205ENST00000437564 CASC10Q5T4H9 136 aa4.08□□□□□ -1.76
MCF2-205ENST00000437564 KRTAP26-1Q6PEX3 210 aa4.08□□□□□ -1.76
MCF2-205ENST00000437564 Q6YL49 198 aa4.08□□□□□ -1.76
MCF2-205ENST00000437564 IGLV5-52A0A0A0MRZ9 124 aa4.07□□□□□ -1.76
MCF2-205ENST00000437564 A0A1B0GU69 56 aa4.07□□□□□ -1.76
MCF2-205ENST00000437564 Q8NBF4 154 aa4.07□□□□□ -1.76
MCF2-205ENST00000437564 COL6A3P12111 3177 aa4.07□□□□□ -1.76
MCF2-205ENST00000437564 DOPEY2Q9Y3R5 2298 aa4.07□□□□□ -1.76
MCF2-205ENST00000437564 NDUFAF8A1L188 74 aa4.06□□□□□ -1.76
MCF2-205ENST00000437564 A8MUU9 505 aa4.06□□□□□ -1.76
MCF2-205ENST00000437564 IGKV3-7A0A075B6H7 116 aa4.05□□□□□ -1.76
MCF2-205ENST00000437564 TP53AIP1Q9HCN2 124 aa4.05□□□□□ -1.76
MCF2-205ENST00000437564 WDR87Q6ZQQ6 2873 aa4.05□□□□□ -1.76
MCF2-205ENST00000437564 A8MTW9 85 aa4.05□□□□□ -1.76
MCF2-205ENST00000437564 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
MCF2-205ENST00000437564 TRGV1A0A0A0MS02 117 aa4.04□□□□□ -1.76
MCF2-205ENST00000437564 PRO3102Q9H379 93 aa4.04□□□□□ -1.76
MCF2-205ENST00000437564 CEP350Q5VT06 3117 aa4.04□□□□□ -1.76
MCF2-205ENST00000437564 IGKV3OR2-268A0A0C4DH90 116 aa4.03□□□□□ -1.76
MCF2-205ENST00000437564 DEFB1P60022 68 aa4.03□□□□□ -1.76
MCF2-205ENST00000437564 WFDC13Q8IUB5 93 aa4.03□□□□□ -1.76
MCF2-205ENST00000437564 C7orf33Q8WU49 177 aa4.03□□□□□ -1.76
MCF2-205ENST00000437564 ASXL3Q9C0F0 2248 aa4.03□□□□□ -1.76
MCF2-205ENST00000437564 Q5W150 140 aa4.03□□□□□ -1.76
MCF2-205ENST00000437564 ABCA4P78363 2273 aa4.03□□□□□ -1.76
MCF2-205ENST00000437564 A6NDX4 124 aa4.02□□□□□ -1.77
MCF2-205ENST00000437564 TLX1NBP0CAT3 122 aa4.02□□□□□ -1.77
MCF2-205ENST00000437564 WFDC10BQ8IUB3 73 aa4.02□□□□□ -1.77
MCF2-205ENST00000437564 MGAQ8IWI9 3026 aa4.02□□□□□ -1.77
MCF2-205ENST00000437564 ACYP2P14621 99 aa4.02□□□□□ -1.77
MCF2-205ENST00000437564 LINC00472Q9H8W2 130 aa4.02□□□□□ -1.77
MCF2-205ENST00000437564 INSP01308 110 aa4.01□□□□□ -1.77
MCF2-205ENST00000437564 RHPN1-AS1Q9BWJ2 59 aa4.01□□□□□ -1.77
MCF2-205ENST00000437564 DEFB133Q30KQ1 61 aa4□□□□□ -1.77
MCF2-205ENST00000437564 RPL37AP8A6NKH3 93 aa4□□□□□ -1.77
MCF2-205ENST00000437564 SPINK13Q1W4C9 94 aa4□□□□□ -1.77
MCF2-205ENST00000437564 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
MCF2-205ENST00000437564 KRTAP3-1Q9BYR8 98 aa3.99□□□□□ -1.77
MCF2-205ENST00000437564 ICE1Q9Y2F5 2266 aa3.99□□□□□ -1.77
MCF2-205ENST00000437564 A0A0J9YWU9 116 aa3.98□□□□□ -1.77
MCF2-205ENST00000437564 DEFB116Q30KQ4 102 aa3.98□□□□□ -1.77
MCF2-205ENST00000437564 PCOTHQ58A44 107 aa3.98□□□□□ -1.77
MCF2-205ENST00000437564 USMG5Q96IX5 58 aa3.98□□□□□ -1.77
MCF2-205ENST00000437564 H3BUA1 57 aa3.98□□□□□ -1.77
MCF2-205ENST00000437564 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
MCF2-205ENST00000437564 SPINT4Q6UDR6 99 aa3.98□□□□□ -1.77
MCF2-205ENST00000437564 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
MCF2-205ENST00000437564 Q8N377 158 aa3.98□□□□□ -1.77
MCF2-205ENST00000437564 TMEM105Q8N8V8 129 aa3.98□□□□□ -1.77
MCF2-205ENST00000437564 MINOS1-NBL1R4GNA1 71 aa3.98□□□□□ -1.77
MCF2-205ENST00000437564 GVQW2A0A096LPI5 108 aaPredicted RBP3.97□□□□□ -1.77
MCF2-205ENST00000437564 IGKV2-24A0A0C4DH68 120 aa3.97□□□□□ -1.77
MCF2-205ENST00000437564 IGLV7-43P04211 117 aa3.97□□□□□ -1.77
MCF2-205ENST00000437564 KRTAP9-3Q9BYQ3 159 aa3.97□□□□□ -1.77
MCF2-205ENST00000437564 DHRS4-AS1Q9P1J3 65 aa3.97□□□□□ -1.77
MCF2-205ENST00000437564 WNK2Q9Y3S1 2297 aa3.97□□□□□ -1.77
MCF2-205ENST00000437564 ANGP03950 147 aaKnown RBP3.96□□□□□ -1.77
MCF2-205ENST00000437564 ANKRD17O75179 2603 aaKnown RBP3.96□□□□□ -1.78
MCF2-205ENST00000437564 A0A087WTM6 91 aa3.95□□□□□ -1.78
MCF2-205ENST00000437564 A0A1B0GUV1 79 aa3.95□□□□□ -1.78
MCF2-205ENST00000437564 LYNX1G3V0Z9 82 aa3.95□□□□□ -1.78
MCF2-205ENST00000437564 CIRBP-AS1Q8TBR5 109 aa3.95□□□□□ -1.78
MCF2-205ENST00000437564 TECTAO75443 2155 aa3.95□□□□□ -1.78
MCF2-205ENST00000437564 IGLV8-61A0A075B6I0 122 aa3.94□□□□□ -1.78
MCF2-205ENST00000437564 UTRNP46939 3433 aa3.94□□□□□ -1.78
MCF2-205ENST00000437564 AHCTF1Q8WYP5 2266 aa3.93□□□□□ -1.78
MCF2-205ENST00000437564 A0A1B0GVX0 72 aa3.93□□□□□ -1.78
MCF2-205ENST00000437564 C6orf48Q9UBA6 75 aa3.93□□□□□ -1.78
MCF2-205ENST00000437564 LINC00304Q8N9R0 145 aa3.93□□□□□ -1.78
MCF2-205ENST00000437564 KMT2BQ9UMN6 2715 aaPredicted RBP3.92□□□□□ -1.78
MCF2-205ENST00000437564 A0A1W2PNU3 283 aaPredicted RBP3.92□□□□□ -1.78
MCF2-205ENST00000437564 HTN1P15515 57 aa3.92□□□□□ -1.78
MCF2-205ENST00000437564 CCL19Q99731 98 aa3.92□□□□□ -1.78
MCF2-205ENST00000437564 G3V318 75 aa3.91□□□□□ -1.78
MCF2-205ENST00000437564 SPTBN1Q01082 2364 aaKnown RBP3.91□□□□□ -1.78
MCF2-205ENST00000437564 DEFB105AQ8NG35 78 aa3.91□□□□□ -1.78
MCF2-205ENST00000437564 PANO1I0J062 215 aa3.9□□□□□ -1.79
MCF2-205ENST00000437564 DEFB131AP59861 70 aa3.9□□□□□ -1.79
MCF2-205ENST00000437564 CUL9Q8IWT3 2517 aa3.89□□□□□ -1.79
MCF2-205ENST00000437564 FAM168BA1KXE4 195 aa3.89□□□□□ -1.79
MCF2-205ENST00000437564 MMP24-AS1A0A0U1RRL7 71 aa3.88□□□□□ -1.79
MCF2-205ENST00000437564 UNQ6190/PRO20217Q6UXQ8 127 aa3.87□□□□□ -1.79
MCF2-205ENST00000437564 KRTAP11-1Q8IUC1 163 aa3.87□□□□□ -1.79
MCF2-205ENST00000437564 C15orf56Q8N910 161 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms