RNA–Protein interactions for RNA: ENST00000434517.1

TOP3B-205, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-205ENST00000434517 SCGB1D1O95968 90 aa13.39□□□□□ -0.27
TOP3B-205ENST00000434517 KRTAP7-1Q8IUC3 87 aa13.39□□□□□ -0.27
TOP3B-205ENST00000434517 VPS13BQ7Z7G8 4022 aa13.38□□□□□ -0.27
TOP3B-205ENST00000434517 UBR4Q5T4S7 5183 aa13.38□□□□□ -0.27
TOP3B-205ENST00000434517 ANKRD39Q53RE8 183 aa13.37□□□□□ -0.27
TOP3B-205ENST00000434517 MIR7-3HGQ8N6C7 128 aa13.36□□□□□ -0.27
TOP3B-205ENST00000434517 PLA2G2DQ9UNK4 145 aa13.36□□□□□ -0.27
TOP3B-205ENST00000434517 C22orf24Q9Y442 160 aa13.36□□□□□ -0.27
TOP3B-205ENST00000434517 ZNF815PA8K554 130 aa13.35□□□□□ -0.27
TOP3B-205ENST00000434517 HSBP1L1C9JCN9 74 aa13.35□□□□□ -0.27
TOP3B-205ENST00000434517 UBE2BP63146 152 aa13.35□□□□□ -0.27
TOP3B-205ENST00000434517 A0A0J9YXY3 114 aa13.34□□□□□ -0.27
TOP3B-205ENST00000434517 NKAPP1Q8N9T2 125 aa13.34□□□□□ -0.27
TOP3B-205ENST00000434517 LBHQ53QV2 105 aaPredicted RBP13.33□□□□□ -0.28
TOP3B-205ENST00000434517 TTTY13Q9BZ97 58 aa13.33□□□□□ -0.28
TOP3B-205ENST00000434517 KRTAP10-4P60372 401 aaPredicted RBP13.32□□□□□ -0.28
TOP3B-205ENST00000434517 RPL24P83731 157 aaKnown RBP13.32□□□□□ -0.28
TOP3B-205ENST00000434517 DAND5Q8N907 189 aa13.32□□□□□ -0.28
TOP3B-205ENST00000434517 TP73-AS1Q9UF72 201 aa13.32□□□□□ -0.28
TOP3B-205ENST00000434517 PRR3P79522 188 aaKnown RBP13.31□□□□□ -0.28
TOP3B-205ENST00000434517 MRPL55Q7Z7F7 128 aaKnown RBP13.31□□□□□ -0.28
TOP3B-205ENST00000434517 IGLV5-37A0A075B6J1 123 aa13.3□□□□□ -0.28
TOP3B-205ENST00000434517 INAFM2P0DMQ5 153 aa13.3□□□□□ -0.28
TOP3B-205ENST00000434517 SRRM2Q9UQ35 2752 aaKnown RBP13.3□□□□□ -0.28
TOP3B-205ENST00000434517 VPREB1P12018 145 aa13.29□□□□□ -0.28
TOP3B-205ENST00000434517 PSORS1C2Q9UIG4 136 aa13.29□□□□□ -0.28
TOP3B-205ENST00000434517 GAGE10A6NGK3 116 aa13.28□□□□□ -0.28
TOP3B-205ENST00000434517 BOD1L2Q8IYS8 172 aa13.28□□□□□ -0.28
TOP3B-205ENST00000434517 MIEN1Q9BRT3 115 aa13.28□□□□□ -0.28
TOP3B-205ENST00000434517 SCGB1D4Q6XE38 83 aa13.27□□□□□ -0.29
TOP3B-205ENST00000434517 KRTAP11-1Q8IUC1 163 aa13.26□□□□□ -0.29
TOP3B-205ENST00000434517 PCP2Q8IVA1 136 aa13.26□□□□□ -0.29
TOP3B-205ENST00000434517 Q8NDZ9 215 aa13.26□□□□□ -0.29
TOP3B-205ENST00000434517 LINC00167Q96N53 147 aa13.26□□□□□ -0.29
TOP3B-205ENST00000434517 TIMM17BO60830 172 aa13.25□□□□□ -0.29
TOP3B-205ENST00000434517 C1orf137Q5JT78 98 aa13.25□□□□□ -0.29
TOP3B-205ENST00000434517 ADAMTSL4-AS1Q5T5F5 129 aa13.25□□□□□ -0.29
TOP3B-205ENST00000434517 RPL37AP8A6NKH3 93 aa13.24□□□□□ -0.29
TOP3B-205ENST00000434517 NPC2P61916 151 aa13.24□□□□□ -0.29
TOP3B-205ENST00000434517 MYCBP2O75592 4640 aa13.24□□□□□ -0.29
TOP3B-205ENST00000434517 JOSD1Q15040 202 aaPredicted RBP13.23□□□□□ -0.29
TOP3B-205ENST00000434517 LITAFQ99732 161 aa13.22□□□□□ -0.29
TOP3B-205ENST00000434517 HNRNPA3P51991 378 aaKnown RBP13.21□□□□□ -0.29
TOP3B-205ENST00000434517 LOC107984156A0A0G2JMH3 177 aa13.2□□□□□ -0.3
TOP3B-205ENST00000434517 TMEM238C9JI98 176 aa13.2□□□□□ -0.3
TOP3B-205ENST00000434517 NCR3O14931 201 aa13.2□□□□□ -0.3
TOP3B-205ENST00000434517 ARL17AQ8IVW1 177 aa13.2□□□□□ -0.3
TOP3B-205ENST00000434517 IGKV2-28A0A075B6P5 120 aa13.19□□□□□ -0.3
TOP3B-205ENST00000434517 M0R378 163 aa13.19□□□□□ -0.3
TOP3B-205ENST00000434517 IGKV2D-28P01615 120 aa13.19□□□□□ -0.3
TOP3B-205ENST00000434517 SOSTDC1Q6X4U4 206 aa13.18□□□□□ -0.3
TOP3B-205ENST00000434517 VAMP8Q9BV40 100 aa13.18□□□□□ -0.3
TOP3B-205ENST00000434517 FLG2Q5D862 2391 aaPredicted RBP13.18□□□□□ -0.3
TOP3B-205ENST00000434517 PKHD1L1Q86WI1 4243 aa13.18□□□□□ -0.3
TOP3B-205ENST00000434517 LINC00308Q8TCZ7 52 aa13.17□□□□□ -0.3
TOP3B-205ENST00000434517 PAM16Q9Y3D7 125 aa13.17□□□□□ -0.3
TOP3B-205ENST00000434517 IGLV1-50A0A075B6I6 118 aa13.16□□□□□ -0.3
TOP3B-205ENST00000434517 IGLV7-43P04211 117 aa13.16□□□□□ -0.3
TOP3B-205ENST00000434517 EIF4EBP3O60516 100 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-205ENST00000434517 SPATA45Q537H7 98 aa13.15□□□□□ -0.3
TOP3B-205ENST00000434517 SPANXDQ9BXN6 97 aa13.15□□□□□ -0.3
TOP3B-205ENST00000434517 SPANXCQ9NY87 97 aa13.15□□□□□ -0.3
TOP3B-205ENST00000434517 NDUFC2O95298 119 aa13.14□□□□□ -0.31
TOP3B-205ENST00000434517 SPANXB1Q9NS25 103 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-205ENST00000434517 PYY3Q5JQD4 70 aa13.13□□□□□ -0.31
TOP3B-205ENST00000434517 SPINK6Q6UWN8 80 aa13.13□□□□□ -0.31
TOP3B-205ENST00000434517 COX8AP10176 69 aa13.12□□□□□ -0.31
TOP3B-205ENST00000434517 COPS9Q8WXC6 57 aa13.12□□□□□ -0.31
TOP3B-205ENST00000434517 TRBV10-2A0A0K0K1G8 114 aa13.11□□□□□ -0.31
TOP3B-205ENST00000434517 BCE1O60756 84 aa13.11□□□□□ -0.31
TOP3B-205ENST00000434517 Q6ZVH6 145 aa13.11□□□□□ -0.31
TOP3B-205ENST00000434517 SRSF9Q13242 221 aaKnown RBP eCLIP13.1□□□□□ -0.31
TOP3B-205ENST00000434517 REG3GQ6UW15 175 aa13.1□□□□□ -0.31
TOP3B-205ENST00000434517 TRBV10-3A0A0K0K1G6 114 aa13.09□□□□□ -0.31
TOP3B-205ENST00000434517 IFITM1P13164 125 aa13.09□□□□□ -0.31
TOP3B-205ENST00000434517 S100A7L2Q5SY68 101 aa13.09□□□□□ -0.31
TOP3B-205ENST00000434517 C14orf144Q96I85 54 aa13.09□□□□□ -0.31
TOP3B-205ENST00000434517 TMEM126AQ9H061 195 aa13.09□□□□□ -0.31
TOP3B-205ENST00000434517 DDTP30046 118 aa13.08□□□□□ -0.32
TOP3B-205ENST00000434517 S100A12P80511 92 aa13.08□□□□□ -0.32
TOP3B-205ENST00000434517 UBE2AP49459 152 aa13.07□□□□□ -0.32
TOP3B-205ENST00000434517 PRYO14603 147 aa13.06□□□□□ -0.32
TOP3B-205ENST00000434517 DLEU1O43261 78 aa13.06□□□□□ -0.32
TOP3B-205ENST00000434517 MUSTN1Q8IVN3 82 aa13.06□□□□□ -0.32
TOP3B-205ENST00000434517 DIRC1Q969H9 104 aa13.06□□□□□ -0.32
TOP3B-205ENST00000434517 ZNF861PO60384 105 aa13.05□□□□□ -0.32
TOP3B-205ENST00000434517 RPL28P46779 137 aaKnown RBP13.05□□□□□ -0.32
TOP3B-205ENST00000434517 FAM19A1Q7Z5A9 133 aa13.05□□□□□ -0.32
TOP3B-205ENST00000434517 SLC25A34Q6PIV7 304 aa13.04□□□□□ -0.32
TOP3B-205ENST00000434517 KCNQ1DNQ9H478 68 aa13.04□□□□□ -0.32
TOP3B-205ENST00000434517 LINC00518Q8N0U6 118 aa13.03□□□□□ -0.32
TOP3B-205ENST00000434517 OR13C6PQ8NH95 151 aa13.03□□□□□ -0.32
TOP3B-205ENST00000434517 PPDPFQ9H3Y8 114 aa13.03□□□□□ -0.32
TOP3B-205ENST00000434517 HMCN2Q8NDA2 5059 aa13.02□□□□□ -0.32
TOP3B-205ENST00000434517 IGLV6-57P01721 117 aa13.02□□□□□ -0.33
TOP3B-205ENST00000434517 H0Y9J4 135 aa13.01□□□□□ -0.33
TOP3B-205ENST00000434517 J3QL48 77 aa13.01□□□□□ -0.33
TOP3B-205ENST00000434517 PRLHP81277 87 aa13□□□□□ -0.33
TOP3B-205ENST00000434517 HIST1H4GQ99525 98 aa13□□□□□ -0.33
TOP3B-205ENST00000434517 TRAV23DV6A0A075B6W5 121 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms