RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ZNF561-AS1K7EIQ3 104 aa7.01□□□□□ -1.29
CD44-210ENST00000434472 C6orf48Q9UBA6 75 aa7.01□□□□□ -1.29
CD44-210ENST00000434472 NOTCH2Q04721 2471 aa7□□□□□ -1.29
CD44-210ENST00000434472 NSD1Q96L73 2696 aaPredicted RBP7□□□□□ -1.29
CD44-210ENST00000434472 KRTAP10-11P60412 298 aa7□□□□□ -1.29
CD44-210ENST00000434472 OXLD1Q5BKU9 147 aa7□□□□□ -1.29
CD44-210ENST00000434472 Q8NDZ9 215 aa7□□□□□ -1.29
CD44-210ENST00000434472 C2orf48Q96LS8 159 aa7□□□□□ -1.29
CD44-210ENST00000434472 CCDC179H3BU77 68 aa6.99□□□□□ -1.29
CD44-210ENST00000434472 GHRHP01286 108 aa6.99□□□□□ -1.29
CD44-210ENST00000434472 RPL18AQ02543 176 aaKnown RBP6.99□□□□□ -1.29
CD44-210ENST00000434472 WFDC10BQ8IUB3 73 aa6.99□□□□□ -1.29
CD44-210ENST00000434472 CAMK2N2Q96S95 79 aa6.99□□□□□ -1.29
CD44-210ENST00000434472 RETNQ9HD89 108 aa6.99□□□□□ -1.29
CD44-210ENST00000434472 B5MCH6 92 aa6.98□□□□□ -1.29
CD44-210ENST00000434472 Q6ZTC4 211 aa6.98□□□□□ -1.29
CD44-210ENST00000434472 LINC00526Q96FQ7 95 aa6.98□□□□□ -1.29
CD44-210ENST00000434472 LINC00846Q9NV44 126 aa6.98□□□□□ -1.29
CD44-210ENST00000434472 HECTD1Q9ULT8 2610 aa6.98□□□□□ -1.29
CD44-210ENST00000434472 OTOGQ6ZRI0 2925 aa6.98□□□□□ -1.29
CD44-210ENST00000434472 TRAV23DV6A0A075B6W5 121 aa6.98□□□□□ -1.29
CD44-210ENST00000434472 TRBV7-6A0A0J9YX20 115 aa6.98□□□□□ -1.29
CD44-210ENST00000434472 KRTAP26-1Q6PEX3 210 aa6.98□□□□□ -1.29
CD44-210ENST00000434472 DIRC1Q969H9 104 aa6.98□□□□□ -1.29
CD44-210ENST00000434472 LINC01556Q5JQF7 62 aa6.97□□□□□ -1.29
CD44-210ENST00000434472 C3orf56Q8N813 242 aa6.97□□□□□ -1.29
CD44-210ENST00000434472 ESRGQ1W209 222 aa6.96□□□□□ -1.3
CD44-210ENST00000434472 ATP5EP2Q5VTU8 51 aa6.96□□□□□ -1.3
CD44-210ENST00000434472 C1orf43Q9BWL3 253 aa6.96□□□□□ -1.3
CD44-210ENST00000434472 DEFB131BA0A096LNP1 70 aa6.95□□□□□ -1.3
CD44-210ENST00000434472 TRBV10-3A0A0K0K1G6 114 aa6.95□□□□□ -1.3
CD44-210ENST00000434472 M0R378 163 aa6.95□□□□□ -1.3
CD44-210ENST00000434472 ATOX1O00244 68 aa6.95□□□□□ -1.3
CD44-210ENST00000434472 KRTAP24-1Q3LI83 254 aa6.95□□□□□ -1.3
CD44-210ENST00000434472 HIGD2BQ4VC39 106 aa6.95□□□□□ -1.3
CD44-210ENST00000434472 C11orf45Q8TAV5 145 aa6.95□□□□□ -1.3
CD44-210ENST00000434472 NBEAL2Q6ZNJ1 2754 aa6.95□□□□□ -1.3
CD44-210ENST00000434472 LOC110117498A0A087WWA1 95 aa6.94□□□□□ -1.3
CD44-210ENST00000434472 PDE6GP18545 87 aa6.94□□□□□ -1.3
CD44-210ENST00000434472 COX7BP24311 80 aa6.94□□□□□ -1.3
CD44-210ENST00000434472 HIST1H4AP62805 103 aaKnown RBP6.94□□□□□ -1.3
CD44-210ENST00000434472 RBM3P98179 157 aaKnown RBP6.94□□□□□ -1.3
CD44-210ENST00000434472 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.94□□□□□ -1.3
CD44-210ENST00000434472 VWFP04275 2813 aa6.94□□□□□ -1.3
CD44-210ENST00000434472 NDUFC2-KCTD14E9PQ53 114 aa6.94□□□□□ -1.3
CD44-210ENST00000434472 ZNF73O43830 326 aaPredicted RBP6.94□□□□□ -1.3
CD44-210ENST00000434472 VPREB1P12018 145 aa6.94□□□□□ -1.3
CD44-210ENST00000434472 Q6ZRU5 148 aa6.94□□□□□ -1.3
CD44-210ENST00000434472 C15orf56Q8N910 161 aa6.94□□□□□ -1.3
CD44-210ENST00000434472 XAGE1AQ9HD64 81 aa6.94□□□□□ -1.3
CD44-210ENST00000434472 TEP1Q99973 2627 aaKnown RBP6.93□□□□□ -1.3
CD44-210ENST00000434472 IGKV3D-7A0A0C4DH55 119 aa6.93□□□□□ -1.3
CD44-210ENST00000434472 UQCRQO14949 82 aa6.93□□□□□ -1.3
CD44-210ENST00000434472 C3orf22Q8N5N4 141 aa6.93□□□□□ -1.3
CD44-210ENST00000434472 UBL5Q9BZL1 73 aa6.93□□□□□ -1.3
CD44-210ENST00000434472 LAMTOR3Q9UHA4 124 aa6.93□□□□□ -1.3
CD44-210ENST00000434472 ELOF1P60002 83 aaKnown RBP6.92□□□□□ -1.3
CD44-210ENST00000434472 IGKV2D-24A0A075B6R9 120 aa6.91□□□□□ -1.3
CD44-210ENST00000434472 Q6ZQT0 140 aa6.91□□□□□ -1.3
CD44-210ENST00000434472 Q6ZQY7 126 aa6.91□□□□□ -1.3
CD44-210ENST00000434472 SS18L2Q9UHA2 77 aa6.91□□□□□ -1.3
CD44-210ENST00000434472 HIVEP1P15822 2718 aa6.91□□□□□ -1.3
CD44-210ENST00000434472 TENM1Q9UKZ4 2725 aa6.91□□□□□ -1.3
CD44-210ENST00000434472 TRAV10A0A0B4J240 114 aa6.9□□□□□ -1.3
CD44-210ENST00000434472 DNAH10OSP0CZ25 163 aa6.9□□□□□ -1.3
CD44-210ENST00000434472 COX7CP15954 63 aa6.9□□□□□ -1.3
CD44-210ENST00000434472 SYCNQ0VAF6 134 aa6.9□□□□□ -1.3
CD44-210ENST00000434472 DSCR8Q96T75 97 aa6.9□□□□□ -1.3
CD44-210ENST00000434472 ATRQ13535 2644 aa6.9□□□□□ -1.3
CD44-210ENST00000434472 C9orf153Q5TBE3 101 aa6.89□□□□□ -1.31
CD44-210ENST00000434472 RMI2Q96E14 147 aa6.87□□□□□ -1.31
CD44-210ENST00000434472 TLX1NBP0CAT3 122 aa6.87□□□□□ -1.31
CD44-210ENST00000434472 LINC00528Q8N1L1 170 aa6.87□□□□□ -1.31
CD44-210ENST00000434472 PLA2G2DQ9UNK4 145 aa6.87□□□□□ -1.31
CD44-210ENST00000434472 USP17L23D6RBM5 183 aa6.86□□□□□ -1.31
CD44-210ENST00000434472 Q6ZRP5 223 aa6.86□□□□□ -1.31
CD44-210ENST00000434472 SERP2Q8N6R1 65 aa6.86□□□□□ -1.31
CD44-210ENST00000434472 NKAPP1Q8N9T2 125 aa6.86□□□□□ -1.31
CD44-210ENST00000434472 A0A087WVE0 104 aa6.84□□□□□ -1.31
CD44-210ENST00000434472 CRYGAP11844 174 aa6.84□□□□□ -1.31
CD44-210ENST00000434472 MRAPQ8TCY5 172 aa6.84□□□□□ -1.31
CD44-210ENST00000434472 KCNQ1DNQ9H478 68 aa6.84□□□□□ -1.31
CD44-210ENST00000434472 TRBV7-4A0A0J9YYF1 115 aa6.83□□□□□ -1.32
CD44-210ENST00000434472 BCE1O60756 84 aa6.83□□□□□ -1.32
CD44-210ENST00000434472 TM2D3Q9BRN9 247 aa6.83□□□□□ -1.32
CD44-210ENST00000434472 IGLV5-37A0A075B6J1 123 aa6.83□□□□□ -1.32
CD44-210ENST00000434472 LINC00588Q9Y4M8 146 aa6.83□□□□□ -1.32
CD44-210ENST00000434472 Q6ZVQ6 151 aa6.82□□□□□ -1.32
CD44-210ENST00000434472 UPK3BQ9BT76 320 aa6.82□□□□□ -1.32
CD44-210ENST00000434472 CXCL6P80162 114 aa6.81□□□□□ -1.32
CD44-210ENST00000434472 C7orf33Q8WU49 177 aa6.81□□□□□ -1.32
CD44-210ENST00000434472 PRYO14603 147 aa6.8□□□□□ -1.32
CD44-210ENST00000434472 LINC01547P58512 204 aaPredicted RBP6.8□□□□□ -1.32
CD44-210ENST00000434472 DHRS4-AS1Q9P1J3 65 aa6.8□□□□□ -1.32
CD44-210ENST00000434472 M0R2N4 97 aa6.79□□□□□ -1.32
CD44-210ENST00000434472 HAMPP81172 84 aa6.79□□□□□ -1.32
CD44-210ENST00000434472 FAM19A1Q7Z5A9 133 aa6.79□□□□□ -1.32
CD44-210ENST00000434472 SERTAD4-AS1Q5TG53 156 aa6.79□□□□□ -1.32
CD44-210ENST00000434472 SMIM20Q8N5G0 67 aa6.79□□□□□ -1.32
CD44-210ENST00000434472 LOC107984640A0A0U1RRK4 108 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms