RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 HIST1H2BOP23527 126 aa3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 HIST1H2BBP33778 126 aa3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 CXCL5P42830 114 aa3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 HIST1H2BDP58876 126 aa3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 HIST1H2BCP62807 126 aa3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 HIST2H2BEQ16778 126 aa3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 KRTAP11-1Q8IUC1 163 aa3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 KRTAP7-1Q8IUC3 87 aa3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 HIST1H2BHQ93079 126 aa3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 HIST1H2BNQ99877 126 aa3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 HIST1H2BMQ99879 126 aa3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 PMCHL2Q9BQD1 86 aa3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 HSPG2P98160 4391 aa3.57□□□□□ -1.84
HMGB3P24-201ENST00000433260 TRAV12-1A0A0B4J245 112 aa3.57□□□□□ -1.84
HMGB3P24-201ENST00000433260 TMEM223A0PJW6 202 aa3.57□□□□□ -1.84
HMGB3P24-201ENST00000433260 UBE2BP63146 152 aa3.57□□□□□ -1.84
HMGB3P24-201ENST00000433260 PRR3P79522 188 aaKnown RBP3.57□□□□□ -1.84
HMGB3P24-201ENST00000433260 C1orf137Q5JT78 98 aa3.57□□□□□ -1.84
HMGB3P24-201ENST00000433260 PSORS1C2Q9UIG4 136 aa3.57□□□□□ -1.84
HMGB3P24-201ENST00000433260 C22orf24Q9Y442 160 aa3.57□□□□□ -1.84
HMGB3P24-201ENST00000433260 DNAH8Q96JB1 4490 aa3.56□□□□□ -1.84
HMGB3P24-201ENST00000433260 IGLV5-39A0A0G2JS06 123 aa3.56□□□□□ -1.84
HMGB3P24-201ENST00000433260 M0QXV9 152 aa3.56□□□□□ -1.84
HMGB3P24-201ENST00000433260 MAP1LC3CQ9BXW4 147 aa3.56□□□□□ -1.84
HMGB3P24-201ENST00000433260 HSPB8Q9UJY1 196 aa3.56□□□□□ -1.84
HMGB3P24-201ENST00000433260 ERG28Q9UKR5 140 aa3.56□□□□□ -1.84
HMGB3P24-201ENST00000433260 RPL37AP8A6NKH3 93 aa3.55□□□□□ -1.84
HMGB3P24-201ENST00000433260 KRTAP29-1A8MX34 341 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P24-201ENST00000433260 LINC00158P58513 81 aa3.55□□□□□ -1.84
HMGB3P24-201ENST00000433260 KRTAP15-1Q3LI76 137 aa3.55□□□□□ -1.84
HMGB3P24-201ENST00000433260 KRTAP4-7Q9BYR0 210 aa3.55□□□□□ -1.84
HMGB3P24-201ENST00000433260 DPM2O94777 84 aa3.54□□□□□ -1.84
HMGB3P24-201ENST00000433260 OXTP01178 125 aa3.54□□□□□ -1.84
HMGB3P24-201ENST00000433260 IGKCP01834 107 aa3.54□□□□□ -1.84
HMGB3P24-201ENST00000433260 IGLV7-43P04211 117 aa3.54□□□□□ -1.84
HMGB3P24-201ENST00000433260 SMIM13P0DJ93 91 aa3.54□□□□□ -1.84
HMGB3P24-201ENST00000433260 SEC61GP60059 68 aa3.54□□□□□ -1.84
HMGB3P24-201ENST00000433260 SRSF9Q13242 221 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGB3P24-201ENST00000433260 LBHQ53QV2 105 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P24-201ENST00000433260 MEIG1Q5JSS6 88 aa3.54□□□□□ -1.84
HMGB3P24-201ENST00000433260 SPINK6Q6UWN8 80 aa3.54□□□□□ -1.84
HMGB3P24-201ENST00000433260 LINC00167Q96N53 147 aa3.54□□□□□ -1.84
HMGB3P24-201ENST00000433260 SND1-IT1Q9HBX3 110 aa3.54□□□□□ -1.84
HMGB3P24-201ENST00000433260 SYS1-DBNDD2H3BUS1 97 aa3.53□□□□□ -1.84
HMGB3P24-201ENST00000433260 PRYO14603 147 aa3.53□□□□□ -1.84
HMGB3P24-201ENST00000433260 LEPROTO15243 131 aa3.53□□□□□ -1.84
HMGB3P24-201ENST00000433260 COX17Q14061 63 aa3.53□□□□□ -1.84
HMGB3P24-201ENST00000433260 MRPL55Q7Z7F7 128 aaKnown RBP3.53□□□□□ -1.84
HMGB3P24-201ENST00000433260 NKAPP1Q8N9T2 125 aa3.53□□□□□ -1.84
HMGB3P24-201ENST00000433260 IGKV2-28A0A075B6P5 120 aa3.52□□□□□ -1.85
HMGB3P24-201ENST00000433260 MYMXA0A1B0GTQ4 84 aa3.52□□□□□ -1.85
HMGB3P24-201ENST00000433260 LOC105371267A0A1B0GV96 52 aa3.52□□□□□ -1.85
HMGB3P24-201ENST00000433260 J3QQQ9 107 aa3.52□□□□□ -1.85
HMGB3P24-201ENST00000433260 IGKV2D-28P01615 120 aa3.52□□□□□ -1.85
HMGB3P24-201ENST00000433260 LGALS3P17931 250 aaKnown RBP3.52□□□□□ -1.85
HMGB3P24-201ENST00000433260 PLNP26678 52 aa3.52□□□□□ -1.85
HMGB3P24-201ENST00000433260 TSPEAR-AS2P59090 65 aa3.52□□□□□ -1.85
HMGB3P24-201ENST00000433260 KRTDAPP60985 99 aa3.52□□□□□ -1.85
HMGB3P24-201ENST00000433260 REG3GQ6UW15 175 aa3.52□□□□□ -1.85
HMGB3P24-201ENST00000433260 KRTAP4-9Q9BYQ8 210 aa3.52□□□□□ -1.85
HMGB3P24-201ENST00000433260 NDUFA12Q9UI09 145 aa3.52□□□□□ -1.85
HMGB3P24-201ENST00000433260 FLG2Q5D862 2391 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P24-201ENST00000433260 C3orf79P0CE67 100 aa3.51□□□□□ -1.85
HMGB3P24-201ENST00000433260 HERVK_113P61574 105 aa3.51□□□□□ -1.85
HMGB3P24-201ENST00000433260 RPL24P83731 157 aaKnown RBP3.51□□□□□ -1.85
HMGB3P24-201ENST00000433260 C5orf47Q569G3 176 aa3.51□□□□□ -1.85
HMGB3P24-201ENST00000433260 SFTA2Q6UW10 78 aa3.51□□□□□ -1.85
HMGB3P24-201ENST00000433260 MIR7-3HGQ8N6C7 128 aa3.51□□□□□ -1.85
HMGB3P24-201ENST00000433260 DAND5Q8N907 189 aa3.51□□□□□ -1.85
HMGB3P24-201ENST00000433260 Q8NDZ9 215 aa3.51□□□□□ -1.85
HMGB3P24-201ENST00000433260 PLEKHB2Q96CS7 222 aa3.51□□□□□ -1.85
HMGB3P24-201ENST00000433260 LINC01600Q96MT4 127 aa3.51□□□□□ -1.85
HMGB3P24-201ENST00000433260 FAT1Q14517 4588 aa3.5□□□□□ -1.85
HMGB3P24-201ENST00000433260 NPC2P61916 151 aa3.5□□□□□ -1.85
HMGB3P24-201ENST00000433260 HERV-K104P63124 156 aa3.5□□□□□ -1.85
HMGB3P24-201ENST00000433260 COA6Q5JTJ3 125 aaKnown RBP3.5□□□□□ -1.85
HMGB3P24-201ENST00000433260 BOD1L2Q8IYS8 172 aa3.5□□□□□ -1.85
HMGB3P24-201ENST00000433260 ATOH7Q8N100 152 aa3.5□□□□□ -1.85
HMGB3P24-201ENST00000433260 DIRC1Q969H9 104 aa3.5□□□□□ -1.85
HMGB3P24-201ENST00000433260 TP73-AS1Q9UF72 201 aa3.5□□□□□ -1.85
HMGB3P24-201ENST00000433260 IGLV1-50A0A075B6I6 118 aa3.49□□□□□ -1.85
HMGB3P24-201ENST00000433260 IGLV5-37A0A075B6J1 123 aa3.49□□□□□ -1.85
HMGB3P24-201ENST00000433260 LINC00587B1AMM8 73 aa3.49□□□□□ -1.85
HMGB3P24-201ENST00000433260 TMEM238C9JI98 176 aa3.49□□□□□ -1.85
HMGB3P24-201ENST00000433260 H0Y9J4 135 aa3.49□□□□□ -1.85
HMGB3P24-201ENST00000433260 NCR3O14931 201 aa3.49□□□□□ -1.85
HMGB3P24-201ENST00000433260 ZNF861PO60384 105 aa3.49□□□□□ -1.85
HMGB3P24-201ENST00000433260 MT1HL1P0DM35 61 aa3.49□□□□□ -1.85
HMGB3P24-201ENST00000433260 SNRPEP62304 92 aaKnown RBP3.49□□□□□ -1.85
HMGB3P24-201ENST00000433260 LINC01545Q5VT33 79 aa3.49□□□□□ -1.85
HMGB3P24-201ENST00000433260 FAM19A1Q7Z5A9 133 aa3.49□□□□□ -1.85
HMGB3P24-201ENST00000433260 TTTY13Q9BZ97 58 aa3.49□□□□□ -1.85
HMGB3P24-201ENST00000433260 SRRM2Q9UQ35 2752 aaKnown RBP3.49□□□□□ -1.85
HMGB3P24-201ENST00000433260 IGKV2D-26A0A0A0MRZ7 120 aa3.48□□□□□ -1.85
HMGB3P24-201ENST00000433260 A0A0J9YXY3 114 aa3.48□□□□□ -1.85
HMGB3P24-201ENST00000433260 E9PLD3 99 aa3.48□□□□□ -1.85
HMGB3P24-201ENST00000433260 BCE1O60756 84 aa3.48□□□□□ -1.85
HMGB3P24-201ENST00000433260 S100A2P29034 98 aa3.48□□□□□ -1.85
HMGB3P24-201ENST00000433260 NMUP48645 174 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms