RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 K7EMI3 77 aa8.37□□□□□ -1.07
NUP50-209ENST00000432340 PRYO14603 147 aa8.37□□□□□ -1.07
NUP50-209ENST00000432340 Q6Q795 121 aa8.37□□□□□ -1.07
NUP50-209ENST00000432340 TMEM136Q6ZRR5 245 aa8.37□□□□□ -1.07
NUP50-209ENST00000432340 LAMTOR2Q9Y2Q5 125 aa8.37□□□□□ -1.07
NUP50-209ENST00000432340 FLGP20930 4061 aaPredicted RBP8.37□□□□□ -1.07
NUP50-209ENST00000432340 ETDCA0A1B0GVM5 59 aa8.36□□□□□ -1.07
NUP50-209ENST00000432340 S100A12P80511 92 aa8.36□□□□□ -1.07
NUP50-209ENST00000432340 PRELID3AQ96N28 172 aa8.36□□□□□ -1.07
NUP50-209ENST00000432340 MAP1LC3AQ9H492 121 aa8.36□□□□□ -1.07
NUP50-209ENST00000432340 KRTAP9-8Q9BYQ0 159 aa8.35□□□□□ -1.07
NUP50-209ENST00000432340 TINCRA0A1B0GVN0 87 aa8.34□□□□□ -1.07
NUP50-209ENST00000432340 PRSS47A8MTI9 375 aa8.34□□□□□ -1.07
NUP50-209ENST00000432340 RPL37P61927 97 aaKnown RBP8.34□□□□□ -1.07
NUP50-209ENST00000432340 C9orf153Q5TBE3 101 aa8.34□□□□□ -1.07
NUP50-209ENST00000432340 MRPL18Q9H0U6 180 aaKnown RBP8.34□□□□□ -1.07
NUP50-209ENST00000432340 ERG28Q9UKR5 140 aa8.34□□□□□ -1.07
NUP50-209ENST00000432340 IGLV5-45A0A087WSX0 123 aa8.33□□□□□ -1.08
NUP50-209ENST00000432340 H3BRM9 83 aa8.33□□□□□ -1.08
NUP50-209ENST00000432340 KRTAP6-3Q3LI67 103 aa8.33□□□□□ -1.08
NUP50-209ENST00000432340 SMIM27A0A1W2PRY6 76 aa8.32□□□□□ -1.08
NUP50-209ENST00000432340 Q8N8P6 123 aa8.32□□□□□ -1.08
NUP50-209ENST00000432340 SFTA2Q6UW10 78 aa8.31□□□□□ -1.08
NUP50-209ENST00000432340 SPINK8P0C7L1 97 aa8.3□□□□□ -1.08
NUP50-209ENST00000432340 SPRR1AP35321 89 aa8.3□□□□□ -1.08
NUP50-209ENST00000432340 MRPL54Q6P161 138 aaKnown RBP8.29□□□□□ -1.08
NUP50-209ENST00000432340 KCNQ1DNQ9H478 68 aa8.29□□□□□ -1.08
NUP50-209ENST00000432340 TRAV9-1A0A075B6T8 112 aa8.28□□□□□ -1.08
NUP50-209ENST00000432340 BLOC1S1P78537 153 aa8.28□□□□□ -1.08
NUP50-209ENST00000432340 ALKAL2Q6UX46 152 aa8.26□□□□□ -1.09
NUP50-209ENST00000432340 A0A1B0GXF2 115 aa8.25□□□□□ -1.09
NUP50-209ENST00000432340 ERASQ7Z444 233 aa8.25□□□□□ -1.09
NUP50-209ENST00000432340 NXT2Q9NPJ8 142 aaKnown RBP8.25□□□□□ -1.09
NUP50-209ENST00000432340 LINC01549A6NIU2 74 aa8.24□□□□□ -1.09
NUP50-209ENST00000432340 ATP5L2Q7Z4Y8 100 aa8.24□□□□□ -1.09
NUP50-209ENST00000432340 Q8NDZ9 215 aa8.24□□□□□ -1.09
NUP50-209ENST00000432340 TOMM6Q96B49 74 aa8.23□□□□□ -1.09
NUP50-209ENST00000432340 SCGB3A1Q96QR1 104 aa8.23□□□□□ -1.09
NUP50-209ENST00000432340 hCG_2014768A0A024R1R8 64 aa8.22□□□□□ -1.09
NUP50-209ENST00000432340 LCE2BO14633 110 aa8.22□□□□□ -1.09
NUP50-209ENST00000432340 RPL23P62829 140 aaKnown RBP8.22□□□□□ -1.09
NUP50-209ENST00000432340 C20orf202A1L168 122 aa8.21□□□□□ -1.1
NUP50-209ENST00000432340 ADIRFQ15847 76 aa8.21□□□□□ -1.1
NUP50-209ENST00000432340 IGLV5-39A0A0G2JS06 123 aa8.2□□□□□ -1.1
NUP50-209ENST00000432340 LINC00158P58513 81 aa8.2□□□□□ -1.1
NUP50-209ENST00000432340 SLC25A34Q6PIV7 304 aa8.2□□□□□ -1.1
NUP50-209ENST00000432340 ZNF625Q96I27 306 aaPredicted RBP8.2□□□□□ -1.1
NUP50-209ENST00000432340 CST9LQ9H4G1 147 aa8.2□□□□□ -1.1
NUP50-209ENST00000432340 B5MCH6 92 aa8.19□□□□□ -1.1
NUP50-209ENST00000432340 ATP6V1G1O75348 118 aa8.19□□□□□ -1.1
NUP50-209ENST00000432340 ERC2-IT1O76042 136 aa8.19□□□□□ -1.1
NUP50-209ENST00000432340 JOSD1Q15040 202 aaPredicted RBP8.18□□□□□ -1.1
NUP50-209ENST00000432340 BOD1L2Q8IYS8 172 aa8.18□□□□□ -1.1
NUP50-209ENST00000432340 PMVKQ15126 192 aa8.17□□□□□ -1.1
NUP50-209ENST00000432340 KRTAP19-6Q3LI70 58 aa8.17□□□□□ -1.1
NUP50-209ENST00000432340 KIAA1644Q3SXP7 199 aa8.17□□□□□ -1.1
NUP50-209ENST00000432340 Q6ZRX8 168 aa8.17□□□□□ -1.1
NUP50-209ENST00000432340 NAT8Q9UHE5 227 aa8.17□□□□□ -1.1
NUP50-209ENST00000432340 C5orf52A6NGY3 159 aa8.16□□□□□ -1.1
NUP50-209ENST00000432340 SRP19P09132 144 aaKnown RBP8.16□□□□□ -1.1
NUP50-209ENST00000432340 HRCT1Q6UXD1 115 aa8.16□□□□□ -1.1
NUP50-209ENST00000432340 TRBV10-3A0A0K0K1G6 114 aa8.15□□□□□ -1.1
NUP50-209ENST00000432340 MT2AP02795 61 aa8.15□□□□□ -1.1
NUP50-209ENST00000432340 CD164Q04900 197 aa8.15□□□□□ -1.1
NUP50-209ENST00000432340 ATP11AUNQ6ZP68 121 aa8.15□□□□□ -1.1
NUP50-209ENST00000432340 NCR3O14931 201 aa8.14□□□□□ -1.11
NUP50-209ENST00000432340 NEBP20929 6669 aa8.14□□□□□ -1.11
NUP50-209ENST00000432340 FA2HQ7L5A8 372 aa8.13□□□□□ -1.11
NUP50-209ENST00000432340 Q9BRP9 147 aa8.13□□□□□ -1.11
NUP50-209ENST00000432340 KRTAP10-10P60014 251 aa8.12□□□□□ -1.11
NUP50-209ENST00000432340 KRTAP9-3Q9BYQ3 159 aa8.12□□□□□ -1.11
NUP50-209ENST00000432340 TRBV20-1A0A075B6N2 111 aa8.11□□□□□ -1.11
NUP50-209ENST00000432340 KRTAP20-1Q3LI63 56 aa8.11□□□□□ -1.11
NUP50-209ENST00000432340 Q5XG85 94 aa8.11□□□□□ -1.11
NUP50-209ENST00000432340 C9JQL5 133 aa8.1□□□□□ -1.11
NUP50-209ENST00000432340 IGLC3P0DOY3 106 aa8.1□□□□□ -1.11
NUP50-209ENST00000432340 ADCYAP1P18509 176 aa8.1□□□□□ -1.11
NUP50-209ENST00000432340 LAMTOR3Q9UHA4 124 aa8.09□□□□□ -1.11
NUP50-209ENST00000432340 A0A0U1RRA0 63 aa8.08□□□□□ -1.12
NUP50-209ENST00000432340 LINC00587B1AMM8 73 aa8.08□□□□□ -1.12
NUP50-209ENST00000432340 PEA15Q15121 130 aa8.08□□□□□ -1.12
NUP50-209ENST00000432340 MT1FP04733 61 aa8.07□□□□□ -1.12
NUP50-209ENST00000432340 DDTP30046 118 aa8.07□□□□□ -1.12
NUP50-209ENST00000432340 C10orf91Q5T1B1 145 aa8.07□□□□□ -1.12
NUP50-209ENST00000432340 C1orf195Q5TG92 126 aa8.07□□□□□ -1.12
NUP50-209ENST00000432340 H7C2G1 150 aa8.06□□□□□ -1.12
NUP50-209ENST00000432340 ZNF22P17026 224 aaPredicted RBP8.06□□□□□ -1.12
NUP50-209ENST00000432340 TRBV10-2A0A0K0K1G8 114 aa8.04□□□□□ -1.12
NUP50-209ENST00000432340 MEIG1Q5JSS6 88 aa8.04□□□□□ -1.12
NUP50-209ENST00000432340 PRO1933Q9H354 126 aa8.04□□□□□ -1.12
NUP50-209ENST00000432340 SPRR1BP22528 89 aa8.03□□□□□ -1.12
NUP50-209ENST00000432340 HINT1P49773 126 aaPredicted RBP8.03□□□□□ -1.12
NUP50-209ENST00000432340 MAP1LC3CQ9BXW4 147 aa8.03□□□□□ -1.12
NUP50-209ENST00000432340 NDUFA6P56556 154 aa8.02□□□□□ -1.13
NUP50-209ENST00000432340 C6orf99Q4VX62 202 aa8.02□□□□□ -1.13
NUP50-209ENST00000432340 MIR7-3HGQ8N6C7 128 aa8.02□□□□□ -1.13
NUP50-209ENST00000432340 ST20-AS1Q8NBB2 130 aa8.02□□□□□ -1.13
NUP50-209ENST00000432340 SMIM13P0DJ93 91 aa8.01□□□□□ -1.13
NUP50-209ENST00000432340 TMEM170BQ5T4T1 132 aa8.01□□□□□ -1.13
NUP50-209ENST00000432340 Q75L30 129 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms