RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 NDUFA12Q9UI09 145 aa12.3□□□□□ -0.44
PTPRA-207ENST00000431048 PMVKQ15126 192 aa12.29□□□□□ -0.44
PTPRA-207ENST00000431048 ANAPC16Q96DE5 110 aa12.29□□□□□ -0.44
PTPRA-207ENST00000431048 RPS29P62273 56 aaKnown RBP12.28□□□□□ -0.44
PTPRA-207ENST00000431048 KRTAP19-2Q3LHN2 52 aa12.27□□□□□ -0.45
PTPRA-207ENST00000431048 LINC01546A6NGU7 62 aa12.26□□□□□ -0.45
PTPRA-207ENST00000431048 MT-ND4LP03901 98 aa12.26□□□□□ -0.45
PTPRA-207ENST00000431048 CFC1BP0CG36 223 aa12.26□□□□□ -0.45
PTPRA-207ENST00000431048 FAM19A2Q8N3H0 131 aa12.26□□□□□ -0.45
PTPRA-207ENST00000431048 MT1HP80294 61 aa12.24□□□□□ -0.45
PTPRA-207ENST00000431048 Q8N377 158 aa12.24□□□□□ -0.45
PTPRA-207ENST00000431048 LINC00483Q53H64 154 aa12.23□□□□□ -0.45
PTPRA-207ENST00000431048 IGLC3P0DOY3 106 aa12.22□□□□□ -0.45
PTPRA-207ENST00000431048 SMCR5Q8TEV8 140 aa12.22□□□□□ -0.45
PTPRA-207ENST00000431048 KIAA1644Q3SXP7 199 aa12.21□□□□□ -0.45
PTPRA-207ENST00000431048 SLC25A20O43772 301 aa12.2□□□□□ -0.46
PTPRA-207ENST00000431048 SFTA2Q6UW10 78 aa12.2□□□□□ -0.46
PTPRA-207ENST00000431048 SSBP3-AS1Q7Z2R9 100 aa12.2□□□□□ -0.46
PTPRA-207ENST00000431048 PRYO14603 147 aa12.19□□□□□ -0.46
PTPRA-207ENST00000431048 SPRR1AP35321 89 aa12.19□□□□□ -0.46
PTPRA-207ENST00000431048 ZNF625Q96I27 306 aaPredicted RBP12.19□□□□□ -0.46
PTPRA-207ENST00000431048 hCG_2014768A0A024R1R8 64 aa12.18□□□□□ -0.46
PTPRA-207ENST00000431048 ZNF22P17026 224 aaPredicted RBP12.18□□□□□ -0.46
PTPRA-207ENST00000431048 KRTAP4-16G5E9R7 235 aaPredicted RBP12.16□□□□□ -0.46
PTPRA-207ENST00000431048 KCNQ1DNQ9H478 68 aa12.16□□□□□ -0.46
PTPRA-207ENST00000431048 LORP23490 312 aaPredicted RBP12.15□□□□□ -0.46
PTPRA-207ENST00000431048 LINC00158P58513 81 aa12.12□□□□□ -0.47
PTPRA-207ENST00000431048 MOBPQ13875 183 aa12.12□□□□□ -0.47
PTPRA-207ENST00000431048 GAGE2AQ6NT46 116 aa12.12□□□□□ -0.47
PTPRA-207ENST00000431048 ETDCA0A1B0GVM5 59 aa12.11□□□□□ -0.47
PTPRA-207ENST00000431048 KRTAP10-6P60371 365 aaPredicted RBP12.11□□□□□ -0.47
PTPRA-207ENST00000431048 IGLV9-49A0A0B4J1Y8 123 aa12.09□□□□□ -0.47
PTPRA-207ENST00000431048 FA2HQ7L5A8 372 aa12.09□□□□□ -0.47
PTPRA-207ENST00000431048 NDUFA6P56556 154 aa12.08□□□□□ -0.48
PTPRA-207ENST00000431048 TRAV9-1A0A075B6T8 112 aa12.07□□□□□ -0.48
PTPRA-207ENST00000431048 SMCO4Q9NRQ5 59 aa12.07□□□□□ -0.48
PTPRA-207ENST00000431048 PCOTHQ58A44 107 aa12.05□□□□□ -0.48
PTPRA-207ENST00000431048 BOD1L2Q8IYS8 172 aa12.05□□□□□ -0.48
PTPRA-207ENST00000431048 IGLV8-61A0A075B6I0 122 aa12.04□□□□□ -0.48
PTPRA-207ENST00000431048 C11orf86A6NJI1 115 aa12.04□□□□□ -0.48
PTPRA-207ENST00000431048 B5MCH6 92 aa12.04□□□□□ -0.48
PTPRA-207ENST00000431048 ERC2-IT1O76042 136 aa12.04□□□□□ -0.48
PTPRA-207ENST00000431048 A0A096LNJ9 63 aa12.03□□□□□ -0.48
PTPRA-207ENST00000431048 A0A0U1RRA0 63 aa12.03□□□□□ -0.48
PTPRA-207ENST00000431048 TMEM170BQ5T4T1 132 aa12.03□□□□□ -0.48
PTPRA-207ENST00000431048 TRBV10-3A0A0K0K1G6 114 aa12.02□□□□□ -0.49
PTPRA-207ENST00000431048 NCR3O14931 201 aa12.02□□□□□ -0.49
PTPRA-207ENST00000431048 ATP6V1G1O75348 118 aa12□□□□□ -0.49
PTPRA-207ENST00000431048 S100A12P80511 92 aa12□□□□□ -0.49
PTPRA-207ENST00000431048 SMIM13P0DJ93 91 aa11.99□□□□□ -0.49
PTPRA-207ENST00000431048 BAGE3Q86Y29 109 aa11.98□□□□□ -0.49
PTPRA-207ENST00000431048 COX19Q49B96 90 aa11.97□□□□□ -0.49
PTPRA-207ENST00000431048 MIR7-3HGQ8N6C7 128 aa11.97□□□□□ -0.49
PTPRA-207ENST00000431048 Q9BRP9 147 aa11.97□□□□□ -0.49
PTPRA-207ENST00000431048 FLGP20930 4061 aaPredicted RBP11.96□□□□□ -0.49
PTPRA-207ENST00000431048 TMEM223A0PJW6 202 aa11.95□□□□□ -0.5
PTPRA-207ENST00000431048 HBDP02042 147 aa11.95□□□□□ -0.5
PTPRA-207ENST00000431048 FABP9Q0Z7S8 132 aa11.94□□□□□ -0.5
PTPRA-207ENST00000431048 Q6ZRX8 168 aa11.94□□□□□ -0.5
PTPRA-207ENST00000431048 LINC00587B1AMM8 73 aa11.93□□□□□ -0.5
PTPRA-207ENST00000431048 LINC00614P0C842 121 aa11.93□□□□□ -0.5
PTPRA-207ENST00000431048 MEIG1Q5JSS6 88 aa11.93□□□□□ -0.5
PTPRA-207ENST00000431048 URB1-AS1Q96HZ7 61 aa11.93□□□□□ -0.5
PTPRA-207ENST00000431048 M0R2T5 61 aa11.92□□□□□ -0.5
PTPRA-207ENST00000431048 HERV-K104P63124 156 aa11.92□□□□□ -0.5
PTPRA-207ENST00000431048 C9orf153Q5TBE3 101 aa11.92□□□□□ -0.5
PTPRA-207ENST00000431048 S100PP25815 95 aa11.91□□□□□ -0.5
PTPRA-207ENST00000431048 CHTOPQ9Y3Y2 248 aaKnown RBP11.91□□□□□ -0.5
PTPRA-207ENST00000431048 LOC107984156A0A0G2JMH3 177 aa11.9□□□□□ -0.5
PTPRA-207ENST00000431048 TRBV10-2A0A0K0K1G8 114 aa11.9□□□□□ -0.5
PTPRA-207ENST00000431048 ARL17AQ8IVW1 177 aa11.9□□□□□ -0.5
PTPRA-207ENST00000431048 KRTAP9-7A8MTY7 169 aa11.89□□□□□ -0.51
PTPRA-207ENST00000431048 DDTP30046 118 aa11.89□□□□□ -0.51
PTPRA-207ENST00000431048 C9orf92A6NGG3 77 aa11.88□□□□□ -0.51
PTPRA-207ENST00000431048 LIMD2Q9BT23 127 aa11.88□□□□□ -0.51
PTPRA-207ENST00000431048 PMCHL1Q16048 86 aa11.87□□□□□ -0.51
PTPRA-207ENST00000431048 MAP1LC3CQ9BXW4 147 aa11.87□□□□□ -0.51
PTPRA-207ENST00000431048 SEC11CQ9BY50 192 aa11.87□□□□□ -0.51
PTPRA-207ENST00000431048 C5orf52A6NGY3 159 aa11.86□□□□□ -0.51
PTPRA-207ENST00000431048 JOSD1Q15040 202 aaPredicted RBP11.86□□□□□ -0.51
PTPRA-207ENST00000431048 C18orf32Q8TCD1 76 aa11.86□□□□□ -0.51
PTPRA-207ENST00000431048 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.85□□□□□ -0.51
PTPRA-207ENST00000431048 TRAV12-1A0A0B4J245 112 aa11.84□□□□□ -0.51
PTPRA-207ENST00000431048 MYMXA0A1B0GTQ4 84 aa11.81□□□□□ -0.52
PTPRA-207ENST00000431048 IGLV6-57P01721 117 aa11.81□□□□□ -0.52
PTPRA-207ENST00000431048 TMEM218A2RU14 115 aa11.8□□□□□ -0.52
PTPRA-207ENST00000431048 COX6B2Q6YFQ2 88 aa11.8□□□□□ -0.52
PTPRA-207ENST00000431048 ST20-AS1Q8NBB2 130 aa11.8□□□□□ -0.52
PTPRA-207ENST00000431048 SPANXB1Q9NS25 103 aaPredicted RBP11.8□□□□□ -0.52
PTPRA-207ENST00000431048 SPRR1BP22528 89 aa11.77□□□□□ -0.53
PTPRA-207ENST00000431048 UQCC3Q6UW78 93 aa11.77□□□□□ -0.53
PTPRA-207ENST00000431048 NDUFC2O95298 119 aa11.76□□□□□ -0.53
PTPRA-207ENST00000431048 S100A7L2Q5SY68 101 aa11.76□□□□□ -0.53
PTPRA-207ENST00000431048 HRCT1Q6UXD1 115 aa11.76□□□□□ -0.53
PTPRA-207ENST00000431048 TRAV23DV6A0A075B6W5 121 aa11.75□□□□□ -0.53
PTPRA-207ENST00000431048 SLC25A34Q6PIV7 304 aa11.75□□□□□ -0.53
PTPRA-207ENST00000431048 TRAPPC1Q9Y5R8 145 aa11.75□□□□□ -0.53
PTPRA-207ENST00000431048 ZNF73O43830 326 aaPredicted RBP11.74□□□□□ -0.53
PTPRA-207ENST00000431048 IFI27L1Q96BM0 104 aa11.74□□□□□ -0.53
PTPRA-207ENST00000431048 RPL37P61927 97 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 418.8 ms