RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 CIRBP-AS1Q8TBR5 109 aa6.97□□□□□ -1.29
CHD4-202ENST00000430771 C14orf144Q96I85 54 aa6.97□□□□□ -1.29
CHD4-202ENST00000430771 LITAFQ99732 161 aa6.97□□□□□ -1.29
CHD4-202ENST00000430771 SPANXDQ9BXN6 97 aa6.97□□□□□ -1.29
CHD4-202ENST00000430771 SPANXCQ9NY87 97 aa6.97□□□□□ -1.29
CHD4-202ENST00000430771 PLA2G2DQ9UNK4 145 aa6.97□□□□□ -1.29
CHD4-202ENST00000430771 M0QXV9 152 aa6.96□□□□□ -1.3
CHD4-202ENST00000430771 NKAPP1Q8N9T2 125 aa6.96□□□□□ -1.3
CHD4-202ENST00000430771 SPANXB1Q9NS25 103 aaPredicted RBP6.96□□□□□ -1.3
CHD4-202ENST00000430771 LOC107984156A0A0G2JMH3 177 aa6.95□□□□□ -1.3
CHD4-202ENST00000430771 FAM168BA1KXE4 195 aa6.95□□□□□ -1.3
CHD4-202ENST00000430771 IFITM1P13164 125 aa6.95□□□□□ -1.3
CHD4-202ENST00000430771 NPC2P61916 151 aa6.95□□□□□ -1.3
CHD4-202ENST00000430771 HAMPP81172 84 aa6.95□□□□□ -1.3
CHD4-202ENST00000430771 ADAMTSL4-AS1Q5T5F5 129 aa6.95□□□□□ -1.3
CHD4-202ENST00000430771 SERTAD4-AS1Q5TG53 156 aa6.95□□□□□ -1.3
CHD4-202ENST00000430771 ARL17AQ8IVW1 177 aa6.95□□□□□ -1.3
CHD4-202ENST00000430771 TP73-AS1Q9UF72 201 aa6.95□□□□□ -1.3
CHD4-202ENST00000430771 IGLV5-37A0A075B6J1 123 aa6.94□□□□□ -1.3
CHD4-202ENST00000430771 A0A1W2PNN7 141 aa6.94□□□□□ -1.3
CHD4-202ENST00000430771 EPM2AB3EWF7 344 aa6.94□□□□□ -1.3
CHD4-202ENST00000430771 XGP55808 180 aa6.94□□□□□ -1.3
CHD4-202ENST00000430771 SRSF9Q13242 221 aaKnown RBP eCLIP6.94□□□□□ -1.3
CHD4-202ENST00000430771 LINC00308Q8TCZ7 52 aa6.94□□□□□ -1.3
CHD4-202ENST00000430771 C7orf33Q8WU49 177 aa6.94□□□□□ -1.3
CHD4-202ENST00000430771 PPDPFQ9H3Y8 114 aa6.94□□□□□ -1.3
CHD4-202ENST00000430771 UQCR10Q9UDW1 63 aa6.94□□□□□ -1.3
CHD4-202ENST00000430771 VPREB1P12018 145 aa6.93□□□□□ -1.3
CHD4-202ENST00000430771 LBHQ53QV2 105 aaPredicted RBP6.93□□□□□ -1.3
CHD4-202ENST00000430771 HIGD1BQ9P298 99 aa6.93□□□□□ -1.3
CHD4-202ENST00000430771 NDUFC2O95298 119 aa6.92□□□□□ -1.3
CHD4-202ENST00000430771 UBE2BP63146 152 aa6.92□□□□□ -1.3
CHD4-202ENST00000430771 SOSTDC1Q6X4U4 206 aa6.92□□□□□ -1.3
CHD4-202ENST00000430771 MRPL55Q7Z7F7 128 aaKnown RBP6.92□□□□□ -1.3
CHD4-202ENST00000430771 C12orf57Q99622 126 aa6.92□□□□□ -1.3
CHD4-202ENST00000430771 C22orf24Q9Y442 160 aa6.92□□□□□ -1.3
CHD4-202ENST00000430771 RYR1P21817 5038 aa6.92□□□□□ -1.3
CHD4-202ENST00000430771 C2orf91Q6ZV80 131 aa6.91□□□□□ -1.3
CHD4-202ENST00000430771 PHF5AQ7RTV0 110 aaKnown RBP6.91□□□□□ -1.3
CHD4-202ENST00000430771 KRTAP7-1Q8IUC3 87 aa6.91□□□□□ -1.3
CHD4-202ENST00000430771 HIST1H4GQ99525 98 aa6.91□□□□□ -1.3
CHD4-202ENST00000430771 TRBV10-2A0A0K0K1G8 114 aa6.9□□□□□ -1.3
CHD4-202ENST00000430771 TSTD3H0UI37 97 aa6.9□□□□□ -1.3
CHD4-202ENST00000430771 NCR3O14931 201 aa6.9□□□□□ -1.3
CHD4-202ENST00000430771 HNRNPA3P51991 378 aaKnown RBP6.9□□□□□ -1.3
CHD4-202ENST00000430771 LINC00528Q8N1L1 170 aa6.9□□□□□ -1.3
CHD4-202ENST00000430771 HSPG2P98160 4391 aa6.9□□□□□ -1.31
CHD4-202ENST00000430771 M0R378 163 aa6.89□□□□□ -1.31
CHD4-202ENST00000430771 TAL2Q16559 108 aa6.89□□□□□ -1.31
CHD4-202ENST00000430771 MUSTN1Q8IVN3 82 aa6.89□□□□□ -1.31
CHD4-202ENST00000430771 Q8NDZ9 215 aa6.89□□□□□ -1.31
CHD4-202ENST00000430771 LINC00518Q8N0U6 118 aa6.88□□□□□ -1.31
CHD4-202ENST00000430771 PRO1933Q9H354 126 aa6.88□□□□□ -1.31
CHD4-202ENST00000430771 KIAA1109Q2LD37 5005 aa6.87□□□□□ -1.31
CHD4-202ENST00000430771 GAGE10A6NGK3 116 aa6.87□□□□□ -1.31
CHD4-202ENST00000430771 EIF4EBP3O60516 100 aaPredicted RBP6.87□□□□□ -1.31
CHD4-202ENST00000430771 HSD52Q0P140 79 aa6.87□□□□□ -1.31
CHD4-202ENST00000430771 S100A7L2Q5SY68 101 aa6.87□□□□□ -1.31
CHD4-202ENST00000430771 LINC00167Q96N53 147 aa6.87□□□□□ -1.31
CHD4-202ENST00000430771 CBY1Q9Y3M2 126 aa6.87□□□□□ -1.31
CHD4-202ENST00000430771 TMEM238LA0A1B0GVL6 79 aa6.86□□□□□ -1.31
CHD4-202ENST00000430771 A6NJY4 79 aa6.86□□□□□ -1.31
CHD4-202ENST00000430771 FAM229AH3BQW9 127 aa6.86□□□□□ -1.31
CHD4-202ENST00000430771 SMR3BP02814 79 aaPredicted RBP6.86□□□□□ -1.31
CHD4-202ENST00000430771 PLA2G1BP04054 148 aaKnown RBP6.86□□□□□ -1.31
CHD4-202ENST00000430771 RPL37AP61513 92 aaKnown RBP6.86□□□□□ -1.31
CHD4-202ENST00000430771 C4orf48Q5BLP8 95 aa6.86□□□□□ -1.31
CHD4-202ENST00000430771 IGKV2-28A0A075B6P5 120 aa6.85□□□□□ -1.31
CHD4-202ENST00000430771 RPL37AP8A6NKH3 93 aa6.85□□□□□ -1.31
CHD4-202ENST00000430771 PRYO14603 147 aa6.85□□□□□ -1.31
CHD4-202ENST00000430771 IGKV2D-28P01615 120 aa6.85□□□□□ -1.31
CHD4-202ENST00000430771 DDTP30046 118 aa6.85□□□□□ -1.31
CHD4-202ENST00000430771 PRR3P79522 188 aaKnown RBP6.85□□□□□ -1.31
CHD4-202ENST00000430771 Q5VSD8 79 aa6.85□□□□□ -1.31
CHD4-202ENST00000430771 HERC2O95714 4834 aa6.84□□□□□ -1.31
CHD4-202ENST00000430771 IGLV1-50A0A075B6I6 118 aa6.84□□□□□ -1.31
CHD4-202ENST00000430771 TRAV13-2A0A0B4J235 113 aa6.84□□□□□ -1.31
CHD4-202ENST00000430771 TRBV10-3A0A0K0K1G6 114 aa6.84□□□□□ -1.31
CHD4-202ENST00000430771 A4D1N5 150 aa6.84□□□□□ -1.31
CHD4-202ENST00000430771 CEND1Q8N111 149 aa6.84□□□□□ -1.31
CHD4-202ENST00000430771 Q8N1X5 172 aa6.84□□□□□ -1.31
CHD4-202ENST00000430771 TMEM126AQ9H061 195 aa6.84□□□□□ -1.31
CHD4-202ENST00000430771 IGLV6-57P01721 117 aa6.83□□□□□ -1.32
CHD4-202ENST00000430771 C1orf137Q5JT78 98 aa6.83□□□□□ -1.32
CHD4-202ENST00000430771 OR13C6PQ8NH95 151 aa6.83□□□□□ -1.32
CHD4-202ENST00000430771 KRTAP17-1Q9BYP8 105 aa6.83□□□□□ -1.32
CHD4-202ENST00000430771 PSORS1C2Q9UIG4 136 aa6.83□□□□□ -1.32
CHD4-202ENST00000430771 TRAV23DV6A0A075B6W5 121 aa6.82□□□□□ -1.32
CHD4-202ENST00000430771 REG3GQ6UW15 175 aa6.82□□□□□ -1.32
CHD4-202ENST00000430771 LINC00337Q8N6G1 96 aa6.82□□□□□ -1.32
CHD4-202ENST00000430771 A6NDN8 102 aa6.81□□□□□ -1.32
CHD4-202ENST00000430771 KRTAP11-1Q8IUC1 163 aa6.81□□□□□ -1.32
CHD4-202ENST00000430771 RAB37Q96AX2 223 aa6.81□□□□□ -1.32
CHD4-202ENST00000430771 KCNQ1DNQ9H478 68 aa6.81□□□□□ -1.32
CHD4-202ENST00000430771 A0A0B4J2C4 111 aa6.8□□□□□ -1.32
CHD4-202ENST00000430771 M0R143 59 aa6.8□□□□□ -1.32
CHD4-202ENST00000430771 BCE1O60756 84 aa6.8□□□□□ -1.32
CHD4-202ENST00000430771 FXYD2P54710 66 aa6.8□□□□□ -1.32
CHD4-202ENST00000430771 FAT1Q14517 4588 aa6.8□□□□□ -1.32
CHD4-202ENST00000430771 VPS13BQ7Z7G8 4022 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 272.4 ms