RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 IGLV5-37A0A075B6J1 123 aa11.33□□□□□ -0.6
CDC42EP1-203ENST00000430687 LOC107984156A0A0G2JMH3 177 aa11.33□□□□□ -0.6
CDC42EP1-203ENST00000430687 M0QXV9 152 aa11.33□□□□□ -0.6
CDC42EP1-203ENST00000430687 RPL24P83731 157 aaKnown RBP11.33□□□□□ -0.6
CDC42EP1-203ENST00000430687 PCP2Q8IVA1 136 aa11.33□□□□□ -0.6
CDC42EP1-203ENST00000430687 ARL17AQ8IVW1 177 aa11.33□□□□□ -0.6
CDC42EP1-203ENST00000430687 C22orf24Q9Y442 160 aa11.33□□□□□ -0.6
CDC42EP1-203ENST00000430687 PLA2G1BP04054 148 aaKnown RBP11.32□□□□□ -0.6
CDC42EP1-203ENST00000430687 LBHQ53QV2 105 aaPredicted RBP11.32□□□□□ -0.6
CDC42EP1-203ENST00000430687 Q5VSD8 79 aa11.32□□□□□ -0.6
CDC42EP1-203ENST00000430687 SCGB1D4Q6XE38 83 aa11.32□□□□□ -0.6
CDC42EP1-203ENST00000430687 PHF5AQ7RTV0 110 aaKnown RBP11.32□□□□□ -0.6
CDC42EP1-203ENST00000430687 HERC2O95714 4834 aa11.31□□□□□ -0.6
CDC42EP1-203ENST00000430687 PYY3Q5JQD4 70 aa11.31□□□□□ -0.6
CDC42EP1-203ENST00000430687 LITAFQ99732 161 aa11.31□□□□□ -0.6
CDC42EP1-203ENST00000430687 VPREB1P12018 145 aa11.3□□□□□ -0.6
CDC42EP1-203ENST00000430687 ADAMTSL4-AS1Q5T5F5 129 aa11.3□□□□□ -0.6
CDC42EP1-203ENST00000430687 NKAPP1Q8N9T2 125 aa11.3□□□□□ -0.6
CDC42EP1-203ENST00000430687 VAMP8Q9BV40 100 aa11.3□□□□□ -0.6
CDC42EP1-203ENST00000430687 RPL37AP61513 92 aaKnown RBP11.29□□□□□ -0.6
CDC42EP1-203ENST00000430687 MRPL55Q7Z7F7 128 aaKnown RBP11.29□□□□□ -0.6
CDC42EP1-203ENST00000430687 DAND5Q8N907 189 aa11.29□□□□□ -0.6
CDC42EP1-203ENST00000430687 MIEN1Q9BRT3 115 aa11.29□□□□□ -0.6
CDC42EP1-203ENST00000430687 TMEM238C9JI98 176 aa11.28□□□□□ -0.6
CDC42EP1-203ENST00000430687 BOD1L2Q8IYS8 172 aa11.28□□□□□ -0.6
CDC42EP1-203ENST00000430687 SPATA45Q537H7 98 aa11.27□□□□□ -0.61
CDC42EP1-203ENST00000430687 Q6ZVH6 145 aa11.27□□□□□ -0.61
CDC42EP1-203ENST00000430687 COX8AP10176 69 aa11.26□□□□□ -0.61
CDC42EP1-203ENST00000430687 SPANXDQ9BXN6 97 aa11.26□□□□□ -0.61
CDC42EP1-203ENST00000430687 SPANXCQ9NY87 97 aa11.26□□□□□ -0.61
CDC42EP1-203ENST00000430687 PAM16Q9Y3D7 125 aa11.26□□□□□ -0.61
CDC42EP1-203ENST00000430687 DLEU1O43261 78 aa11.25□□□□□ -0.61
CDC42EP1-203ENST00000430687 UBE2BP63146 152 aa11.25□□□□□ -0.61
CDC42EP1-203ENST00000430687 Q8NDZ9 215 aa11.25□□□□□ -0.61
CDC42EP1-203ENST00000430687 NDUFC2O95298 119 aa11.24□□□□□ -0.61
CDC42EP1-203ENST00000430687 KRTAP10-4P60372 401 aaPredicted RBP11.24□□□□□ -0.61
CDC42EP1-203ENST00000430687 LINC00308Q8TCZ7 52 aa11.24□□□□□ -0.61
CDC42EP1-203ENST00000430687 COPS9Q8WXC6 57 aa11.24□□□□□ -0.61
CDC42EP1-203ENST00000430687 LINC00167Q96N53 147 aa11.24□□□□□ -0.61
CDC42EP1-203ENST00000430687 PPDPFQ9H3Y8 114 aa11.24□□□□□ -0.61
CDC42EP1-203ENST00000430687 M0R378 163 aa11.23□□□□□ -0.61
CDC42EP1-203ENST00000430687 PRR3P79522 188 aaKnown RBP11.23□□□□□ -0.61
CDC42EP1-203ENST00000430687 IFITM1P13164 125 aa11.22□□□□□ -0.61
CDC42EP1-203ENST00000430687 SOSTDC1Q6X4U4 206 aa11.22□□□□□ -0.61
CDC42EP1-203ENST00000430687 PSORS1C2Q9UIG4 136 aa11.22□□□□□ -0.61
CDC42EP1-203ENST00000430687 TRBV10-2A0A0K0K1G8 114 aa11.21□□□□□ -0.61
CDC42EP1-203ENST00000430687 SPANXB1Q9NS25 103 aaPredicted RBP11.21□□□□□ -0.61
CDC42EP1-203ENST00000430687 GAGE10A6NGK3 116 aa11.2□□□□□ -0.62
CDC42EP1-203ENST00000430687 NPC2P61916 151 aa11.2□□□□□ -0.62
CDC42EP1-203ENST00000430687 KRTAP11-1Q8IUC1 163 aa11.2□□□□□ -0.62
CDC42EP1-203ENST00000430687 C14orf144Q96I85 54 aa11.2□□□□□ -0.62
CDC42EP1-203ENST00000430687 KRTAP4-5Q9BYR2 181 aa11.2□□□□□ -0.62
CDC42EP1-203ENST00000430687 IGLV1-50A0A075B6I6 118 aa11.19□□□□□ -0.62
CDC42EP1-203ENST00000430687 RPL37AP8A6NKH3 93 aa11.19□□□□□ -0.62
CDC42EP1-203ENST00000430687 EIF4EBP3O60516 100 aaPredicted RBP11.19□□□□□ -0.62
CDC42EP1-203ENST00000430687 S100A12P80511 92 aa11.19□□□□□ -0.62
CDC42EP1-203ENST00000430687 SLC25A34Q6PIV7 304 aa11.19□□□□□ -0.62
CDC42EP1-203ENST00000430687 FAT1Q14517 4588 aa11.18□□□□□ -0.62
CDC42EP1-203ENST00000430687 NCR3O14931 201 aa11.17□□□□□ -0.62
CDC42EP1-203ENST00000430687 SRSF9Q13242 221 aaKnown RBP eCLIP11.17□□□□□ -0.62
CDC42EP1-203ENST00000430687 C1orf137Q5JT78 98 aa11.17□□□□□ -0.62
CDC42EP1-203ENST00000430687 IGKV2-28A0A075B6P5 120 aa11.15□□□□□ -0.62
CDC42EP1-203ENST00000430687 IGKV2D-28P01615 120 aa11.15□□□□□ -0.62
CDC42EP1-203ENST00000430687 MUSTN1Q8IVN3 82 aa11.15□□□□□ -0.62
CDC42EP1-203ENST00000430687 LINC00518Q8N0U6 118 aa11.15□□□□□ -0.62
CDC42EP1-203ENST00000430687 HIGD1BQ9P298 99 aa11.15□□□□□ -0.62
CDC42EP1-203ENST00000430687 PCLOQ9Y6V0 5065 aa11.14□□□□□ -0.63
CDC42EP1-203ENST00000430687 LOC105371267A0A1B0GV96 52 aa11.14□□□□□ -0.63
CDC42EP1-203ENST00000430687 SMIM6P0DI80 62 aa11.14□□□□□ -0.63
CDC42EP1-203ENST00000430687 IGLV7-43P04211 117 aa11.13□□□□□ -0.63
CDC42EP1-203ENST00000430687 INAFM2P0DMQ5 153 aa11.13□□□□□ -0.63
CDC42EP1-203ENST00000430687 VPS13BQ7Z7G8 4022 aa11.12□□□□□ -0.63
CDC42EP1-203ENST00000430687 BCE1O60756 84 aa11.12□□□□□ -0.63
CDC42EP1-203ENST00000430687 S100A7L2Q5SY68 101 aa11.12□□□□□ -0.63
CDC42EP1-203ENST00000430687 TRBV10-3A0A0K0K1G6 114 aa11.11□□□□□ -0.63
CDC42EP1-203ENST00000430687 PRYO14603 147 aa11.11□□□□□ -0.63
CDC42EP1-203ENST00000430687 DDTP30046 118 aa11.11□□□□□ -0.63
CDC42EP1-203ENST00000430687 REG3GQ6UW15 175 aa11.11□□□□□ -0.63
CDC42EP1-203ENST00000430687 HIST1H4GQ99525 98 aa11.11□□□□□ -0.63
CDC42EP1-203ENST00000430687 KCNQ1DNQ9H478 68 aa11.11□□□□□ -0.63
CDC42EP1-203ENST00000430687 CBY1Q9Y3M2 126 aa11.11□□□□□ -0.63
CDC42EP1-203ENST00000430687 IGLV6-57P01721 117 aa11.1□□□□□ -0.63
CDC42EP1-203ENST00000430687 SPINK6Q6UWN8 80 aa11.1□□□□□ -0.63
CDC42EP1-203ENST00000430687 TMEM126AQ9H061 195 aa11.1□□□□□ -0.63
CDC42EP1-203ENST00000430687 SRRM2Q9UQ35 2752 aaKnown RBP11.09□□□□□ -0.63
CDC42EP1-203ENST00000430687 HNRNPA3P51991 378 aaKnown RBP11.09□□□□□ -0.63
CDC42EP1-203ENST00000430687 C2orf91Q6ZV80 131 aa11.09□□□□□ -0.63
CDC42EP1-203ENST00000430687 TAL2Q16559 108 aa11.07□□□□□ -0.64
CDC42EP1-203ENST00000430687 UQCR10Q9UDW1 63 aa11.07□□□□□ -0.64
CDC42EP1-203ENST00000430687 ZNF861PO60384 105 aa11.06□□□□□ -0.64
CDC42EP1-203ENST00000430687 SPRR1AP35321 89 aa11.06□□□□□ -0.64
CDC42EP1-203ENST00000430687 RPL28P46779 137 aaKnown RBP11.06□□□□□ -0.64
CDC42EP1-203ENST00000430687 OR13C6PQ8NH95 151 aa11.06□□□□□ -0.64
CDC42EP1-203ENST00000430687 LINC00337Q8N6G1 96 aa11.05□□□□□ -0.64
CDC42EP1-203ENST00000430687 TRAV13-2A0A0B4J235 113 aa11.04□□□□□ -0.64
CDC42EP1-203ENST00000430687 A4D1N5 150 aa11.04□□□□□ -0.64
CDC42EP1-203ENST00000430687 DIRC1Q969H9 104 aa11.04□□□□□ -0.64
CDC42EP1-203ENST00000430687 TRAV23DV6A0A075B6W5 121 aa11.03□□□□□ -0.64
CDC42EP1-203ENST00000430687 H0Y9J4 135 aa11.03□□□□□ -0.64
CDC42EP1-203ENST00000430687 UBE2AP49459 152 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms