RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 FAM168BA1KXE4 195 aa10.52□□□□□ -0.73
UBE3D-204ENST00000430071 LGALS3P17931 250 aaKnown RBP10.52□□□□□ -0.73
UBE3D-204ENST00000430071 MYMXA0A1B0GTQ4 84 aa10.51□□□□□ -0.73
UBE3D-204ENST00000430071 HERV-K104P63124 156 aa10.51□□□□□ -0.73
UBE3D-204ENST00000430071 ANKRD39Q53RE8 183 aa10.51□□□□□ -0.73
UBE3D-204ENST00000430071 KRTAP7-1Q8IUC3 87 aa10.51□□□□□ -0.73
UBE3D-204ENST00000430071 AKR1D1P51857 326 aa10.5□□□□□ -0.73
UBE3D-204ENST00000430071 COX17Q14061 63 aa10.5□□□□□ -0.73
UBE3D-204ENST00000430071 A0A0U1RRA0 63 aa10.49□□□□□ -0.73
UBE3D-204ENST00000430071 SMIM13P0DJ93 91 aa10.49□□□□□ -0.73
UBE3D-204ENST00000430071 NMUP48645 174 aa10.49□□□□□ -0.73
UBE3D-204ENST00000430071 LINC00158P58513 81 aa10.48□□□□□ -0.73
UBE3D-204ENST00000430071 SERTAD4-AS1Q5TG53 156 aa10.48□□□□□ -0.73
UBE3D-204ENST00000430071 FAM19A5Q7Z5A7 132 aaPredicted RBP10.48□□□□□ -0.73
UBE3D-204ENST00000430071 TTTY13Q9BZ97 58 aa10.48□□□□□ -0.73
UBE3D-204ENST00000430071 SCGB1D1O95968 90 aa10.47□□□□□ -0.73
UBE3D-204ENST00000430071 MEIG1Q5JSS6 88 aa10.47□□□□□ -0.73
UBE3D-204ENST00000430071 SND1-IT1Q9HBX3 110 aa10.47□□□□□ -0.73
UBE3D-204ENST00000430071 A0A0J9YXY3 114 aa10.44□□□□□ -0.74
UBE3D-204ENST00000430071 PHF5AQ7RTV0 110 aaKnown RBP10.44□□□□□ -0.74
UBE3D-204ENST00000430071 SRSF9Q13242 221 aaKnown RBP eCLIP10.43□□□□□ -0.74
UBE3D-204ENST00000430071 MIR7-3HGQ8N6C7 128 aa10.43□□□□□ -0.74
UBE3D-204ENST00000430071 ZNF815PA8K554 130 aa10.42□□□□□ -0.74
UBE3D-204ENST00000430071 LINC00587B1AMM8 73 aa10.42□□□□□ -0.74
UBE3D-204ENST00000430071 M0QXV9 152 aa10.42□□□□□ -0.74
UBE3D-204ENST00000430071 PLA2G2DQ9UNK4 145 aa10.42□□□□□ -0.74
UBE3D-204ENST00000430071 JOSD1Q15040 202 aaPredicted RBP10.41□□□□□ -0.74
UBE3D-204ENST00000430071 KRTAP11-1Q8IUC1 163 aa10.41□□□□□ -0.74
UBE3D-204ENST00000430071 PCP2Q8IVA1 136 aa10.41□□□□□ -0.74
UBE3D-204ENST00000430071 DAND5Q8N907 189 aa10.41□□□□□ -0.74
UBE3D-204ENST00000430071 Q8NDZ9 215 aa10.41□□□□□ -0.74
UBE3D-204ENST00000430071 LINC01600Q96MT4 127 aa10.4□□□□□ -0.74
UBE3D-204ENST00000430071 PSORS1C2Q9UIG4 136 aa10.4□□□□□ -0.74
UBE3D-204ENST00000430071 C22orf24Q9Y442 160 aa10.4□□□□□ -0.74
UBE3D-204ENST00000430071 UBR4Q5T4S7 5183 aa10.4□□□□□ -0.74
UBE3D-204ENST00000430071 HSBP1L1C9JCN9 74 aa10.39□□□□□ -0.75
UBE3D-204ENST00000430071 ADAMTSL4-AS1Q5T5F5 129 aa10.39□□□□□ -0.75
UBE3D-204ENST00000430071 LITAFQ99732 161 aa10.39□□□□□ -0.75
UBE3D-204ENST00000430071 IGLV5-37A0A075B6J1 123 aa10.39□□□□□ -0.75
UBE3D-204ENST00000430071 VPREB1P12018 145 aa10.39□□□□□ -0.75
UBE3D-204ENST00000430071 SPINK6Q6UWN8 80 aa10.38□□□□□ -0.75
UBE3D-204ENST00000430071 PYY3Q5JQD4 70 aa10.37□□□□□ -0.75
UBE3D-204ENST00000430071 TP73-AS1Q9UF72 201 aa10.37□□□□□ -0.75
UBE3D-204ENST00000430071 TIMM17BO60830 172 aa10.36□□□□□ -0.75
UBE3D-204ENST00000430071 KRTAP10-8P60410 259 aa10.36□□□□□ -0.75
UBE3D-204ENST00000430071 MRPL55Q7Z7F7 128 aaKnown RBP10.36□□□□□ -0.75
UBE3D-204ENST00000430071 EIF4EBP3O60516 100 aaPredicted RBP10.35□□□□□ -0.75
UBE3D-204ENST00000430071 BOD1L2Q8IYS8 172 aa10.35□□□□□ -0.75
UBE3D-204ENST00000430071 NKAPP1Q8N9T2 125 aa10.35□□□□□ -0.75
UBE3D-204ENST00000430071 LOC107984156A0A0G2JMH3 177 aa10.34□□□□□ -0.75
UBE3D-204ENST00000430071 GAGE10A6NGK3 116 aa10.34□□□□□ -0.75
UBE3D-204ENST00000430071 RPL24P83731 157 aaKnown RBP10.34□□□□□ -0.75
UBE3D-204ENST00000430071 SOSTDC1Q6X4U4 206 aa10.34□□□□□ -0.75
UBE3D-204ENST00000430071 SCGB1D4Q6XE38 83 aa10.34□□□□□ -0.75
UBE3D-204ENST00000430071 ARL17AQ8IVW1 177 aa10.34□□□□□ -0.75
UBE3D-204ENST00000430071 LINC00167Q96N53 147 aa10.34□□□□□ -0.75
UBE3D-204ENST00000430071 NPC2P61916 151 aa10.33□□□□□ -0.76
UBE3D-204ENST00000430071 UBE2BP63146 152 aa10.33□□□□□ -0.76
UBE3D-204ENST00000430071 LBHQ53QV2 105 aaPredicted RBP10.33□□□□□ -0.76
UBE3D-204ENST00000430071 C1orf137Q5JT78 98 aa10.33□□□□□ -0.76
UBE3D-204ENST00000430071 VAMP8Q9BV40 100 aa10.32□□□□□ -0.76
UBE3D-204ENST00000430071 PAM16Q9Y3D7 125 aa10.32□□□□□ -0.76
UBE3D-204ENST00000430071 RPL37AP8A6NKH3 93 aa10.3□□□□□ -0.76
UBE3D-204ENST00000430071 SPATA45Q537H7 98 aa10.3□□□□□ -0.76
UBE3D-204ENST00000430071 REG3GQ6UW15 175 aa10.3□□□□□ -0.76
UBE3D-204ENST00000430071 LINC00308Q8TCZ7 52 aa10.3□□□□□ -0.76
UBE3D-204ENST00000430071 MIEN1Q9BRT3 115 aa10.3□□□□□ -0.76
UBE3D-204ENST00000430071 COX8AP10176 69 aa10.29□□□□□ -0.76
UBE3D-204ENST00000430071 SPANXDQ9BXN6 97 aa10.29□□□□□ -0.76
UBE3D-204ENST00000430071 SPANXCQ9NY87 97 aa10.29□□□□□ -0.76
UBE3D-204ENST00000430071 LRP2P98164 4655 aa10.29□□□□□ -0.76
UBE3D-204ENST00000430071 TMEM238C9JI98 176 aa10.28□□□□□ -0.76
UBE3D-204ENST00000430071 NCR3O14931 201 aa10.28□□□□□ -0.76
UBE3D-204ENST00000430071 IGKV2-28A0A075B6P5 120 aa10.27□□□□□ -0.76
UBE3D-204ENST00000430071 M0R378 163 aa10.27□□□□□ -0.76
UBE3D-204ENST00000430071 IGKV2D-28P01615 120 aa10.27□□□□□ -0.76
UBE3D-204ENST00000430071 IGLV7-43P04211 117 aa10.27□□□□□ -0.76
UBE3D-204ENST00000430071 C14orf144Q96I85 54 aa10.27□□□□□ -0.76
UBE3D-204ENST00000430071 IGLV1-50A0A075B6I6 118 aa10.26□□□□□ -0.77
UBE3D-204ENST00000430071 NDUFC2O95298 119 aa10.26□□□□□ -0.77
UBE3D-204ENST00000430071 DLEU1O43261 78 aa10.25□□□□□ -0.77
UBE3D-204ENST00000430071 SPANXB1Q9NS25 103 aaPredicted RBP10.24□□□□□ -0.77
UBE3D-204ENST00000430071 TRBV10-2A0A0K0K1G8 114 aa10.23□□□□□ -0.77
UBE3D-204ENST00000430071 Q6ZVH6 145 aa10.23□□□□□ -0.77
UBE3D-204ENST00000430071 TRBV10-3A0A0K0K1G6 114 aa10.22□□□□□ -0.77
UBE3D-204ENST00000430071 IFITM1P13164 125 aa10.22□□□□□ -0.77
UBE3D-204ENST00000430071 MUSTN1Q8IVN3 82 aa10.22□□□□□ -0.77
UBE3D-204ENST00000430071 SLC25A34Q6PIV7 304 aa10.21□□□□□ -0.78
UBE3D-204ENST00000430071 PRR26Q8N8Z3 221 aa10.21□□□□□ -0.78
UBE3D-204ENST00000430071 LOC105371267A0A1B0GV96 52 aa10.2□□□□□ -0.78
UBE3D-204ENST00000430071 H0Y9J4 135 aa10.2□□□□□ -0.78
UBE3D-204ENST00000430071 BCE1O60756 84 aa10.2□□□□□ -0.78
UBE3D-204ENST00000430071 TMEM126AQ9H061 195 aa10.2□□□□□ -0.78
UBE3D-204ENST00000430071 PPDPFQ9H3Y8 114 aa10.2□□□□□ -0.78
UBE3D-204ENST00000430071 C2orf91Q6ZV80 131 aa10.19□□□□□ -0.78
UBE3D-204ENST00000430071 DIRC1Q969H9 104 aa10.19□□□□□ -0.78
UBE3D-204ENST00000430071 IGLV6-57P01721 117 aa10.18□□□□□ -0.78
UBE3D-204ENST00000430071 KRTAP1-4P0C5Y4 121 aa10.18□□□□□ -0.78
UBE3D-204ENST00000430071 DDTP30046 118 aa10.18□□□□□ -0.78
UBE3D-204ENST00000430071 COPS9Q8WXC6 57 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms