RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 MRPL55Q7Z7F7 128 aaKnown RBP5.07□□□□□ -1.6
CNOT4-206ENST00000428680 MRPS36P82909 103 aaKnown RBP5.07□□□□□ -1.6
CNOT4-206ENST00000428680 C11orf21Q9P2W6 132 aa5.07□□□□□ -1.6
CNOT4-206ENST00000428680 IGLV4-60A0A075B6I1 120 aa5.07□□□□□ -1.6
CNOT4-206ENST00000428680 TSHBP01222 138 aa5.07□□□□□ -1.6
CNOT4-206ENST00000428680 ZNF22P17026 224 aaPredicted RBP5.07□□□□□ -1.6
CNOT4-206ENST00000428680 COX17Q14061 63 aa5.07□□□□□ -1.6
CNOT4-206ENST00000428680 CCKP06307 115 aa5.06□□□□□ -1.6
CNOT4-206ENST00000428680 SPACA4Q8TDM5 124 aa5.06□□□□□ -1.6
CNOT4-206ENST00000428680 LINC00588Q9Y4M8 146 aa5.06□□□□□ -1.6
CNOT4-206ENST00000428680 TYMSOSQ8TAI1 123 aa5.06□□□□□ -1.6
CNOT4-206ENST00000428680 KRTAP10-11P60412 298 aa5.06□□□□□ -1.6
CNOT4-206ENST00000428680 Q6ZQY7 126 aa5.06□□□□□ -1.6
CNOT4-206ENST00000428680 A0A1B0GUV1 79 aa5.06□□□□□ -1.6
CNOT4-206ENST00000428680 CRIP1P50238 77 aa5.06□□□□□ -1.6
CNOT4-206ENST00000428680 A0A0J9YXY3 114 aa5.05□□□□□ -1.6
CNOT4-206ENST00000428680 X6R8D5 127 aa5.05□□□□□ -1.6
CNOT4-206ENST00000428680 K7ERJ3 54 aa5.05□□□□□ -1.6
CNOT4-206ENST00000428680 PRYO14603 147 aa5.04□□□□□ -1.6
CNOT4-206ENST00000428680 Q8NAQ8 132 aa5.04□□□□□ -1.6
CNOT4-206ENST00000428680 PPDPFLQ8WWR9 84 aa5.04□□□□□ -1.6
CNOT4-206ENST00000428680 TTTY13Q9BZ97 58 aa5.04□□□□□ -1.6
CNOT4-206ENST00000428680 POLR2KP53803 58 aaKnown RBP5.04□□□□□ -1.6
CNOT4-206ENST00000428680 LINC00308Q8TCZ7 52 aa5.04□□□□□ -1.6
CNOT4-206ENST00000428680 KIF25-AS1Q9Y6Z4 181 aa5.04□□□□□ -1.6
CNOT4-206ENST00000428680 ETDBQ3ZM63 59 aa5.03□□□□□ -1.6
CNOT4-206ENST00000428680 ANAPC13Q9BS18 74 aa5.03□□□□□ -1.6
CNOT4-206ENST00000428680 FLG2Q5D862 2391 aaPredicted RBP5.03□□□□□ -1.6
CNOT4-206ENST00000428680 Q6ZRU5 148 aa5.03□□□□□ -1.6
CNOT4-206ENST00000428680 Q6ZVQ6 151 aa5.03□□□□□ -1.6
CNOT4-206ENST00000428680 TEX49A0A1B0GTD5 131 aa5.03□□□□□ -1.6
CNOT4-206ENST00000428680 LINC00173Q6ZV60 143 aa5.03□□□□□ -1.6
CNOT4-206ENST00000428680 ANKRD39Q53RE8 183 aa5.03□□□□□ -1.6
CNOT4-206ENST00000428680 PRLHP81277 87 aa5.02□□□□□ -1.61
CNOT4-206ENST00000428680 CASC10Q5T4H9 136 aa5.02□□□□□ -1.61
CNOT4-206ENST00000428680 Q6JHZ5 121 aa5.02□□□□□ -1.61
CNOT4-206ENST00000428680 C11orf1Q9H5F2 150 aa5.02□□□□□ -1.61
CNOT4-206ENST00000428680 UTP20O75691 2785 aaKnown RBP5.02□□□□□ -1.61
CNOT4-206ENST00000428680 RNF185Q96GF1 192 aa5.01□□□□□ -1.61
CNOT4-206ENST00000428680 LINC00242Q5T6M2 205 aa5.01□□□□□ -1.61
CNOT4-206ENST00000428680 CLEC2BQ92478 149 aa5.01□□□□□ -1.61
CNOT4-206ENST00000428680 Q9BRP9 147 aa5.01□□□□□ -1.61
CNOT4-206ENST00000428680 TMEM223A0PJW6 202 aa5.01□□□□□ -1.61
CNOT4-206ENST00000428680 MRPL52Q86TS9 123 aaKnown RBP5.01□□□□□ -1.61
CNOT4-206ENST00000428680 C22orf24Q9Y442 160 aa5.01□□□□□ -1.61
CNOT4-206ENST00000428680 TRBV10-3A0A0K0K1G6 114 aa5□□□□□ -1.61
CNOT4-206ENST00000428680 K7ERS5 55 aa5□□□□□ -1.61
CNOT4-206ENST00000428680 LINC00694P0DN24 101 aa5□□□□□ -1.61
CNOT4-206ENST00000428680 LINC00476Q8WZB0 136 aa5□□□□□ -1.61
CNOT4-206ENST00000428680 C9orf118A6NHY6 69 aa5□□□□□ -1.61
CNOT4-206ENST00000428680 A0A1B0GXF2 115 aa5□□□□□ -1.61
CNOT4-206ENST00000428680 FAM19A3Q7Z5A8 133 aa5□□□□□ -1.61
CNOT4-206ENST00000428680 IGKV3D-7A0A0C4DH55 119 aa4.99□□□□□ -1.61
CNOT4-206ENST00000428680 CDPF1Q6NVV7 123 aa4.99□□□□□ -1.61
CNOT4-206ENST00000428680 WFDC13Q8IUB5 93 aa4.99□□□□□ -1.61
CNOT4-206ENST00000428680 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.99□□□□□ -1.61
CNOT4-206ENST00000428680 IGHV6-1A0A0B4J1U7 121 aa4.98□□□□□ -1.61
CNOT4-206ENST00000428680 ACYP1P07311 99 aa4.98□□□□□ -1.61
CNOT4-206ENST00000428680 CRYBG3Q68DQ2 2970 aa4.98□□□□□ -1.61
CNOT4-206ENST00000428680 C5orf47Q569G3 176 aa4.98□□□□□ -1.61
CNOT4-206ENST00000428680 CSDC2Q9Y534 153 aaKnown RBP4.98□□□□□ -1.61
CNOT4-206ENST00000428680 MRPS12O15235 138 aaKnown RBP4.98□□□□□ -1.61
CNOT4-206ENST00000428680 DNAH10OSP0CZ25 163 aa4.98□□□□□ -1.61
CNOT4-206ENST00000428680 SMCR5Q8TEV8 140 aa4.98□□□□□ -1.61
CNOT4-206ENST00000428680 PTH2Q96A98 100 aa4.98□□□□□ -1.61
CNOT4-206ENST00000428680 PYY3Q5JQD4 70 aa4.97□□□□□ -1.61
CNOT4-206ENST00000428680 F8W1H4 67 aa4.97□□□□□ -1.61
CNOT4-206ENST00000428680 MOBPQ13875 183 aa4.97□□□□□ -1.61
CNOT4-206ENST00000428680 NRACQ8N912 160 aa4.97□□□□□ -1.61
CNOT4-206ENST00000428680 C11orf72Q8NBR9 251 aa4.96□□□□□ -1.61
CNOT4-206ENST00000428680 A0A087WYN8 130 aa4.96□□□□□ -1.62
CNOT4-206ENST00000428680 A0A1W2PPM0 123 aa4.96□□□□□ -1.62
CNOT4-206ENST00000428680 SCXQ7RTU7 201 aa4.96□□□□□ -1.62
CNOT4-206ENST00000428680 SPTSSBQ8NFR3 76 aa4.96□□□□□ -1.62
CNOT4-206ENST00000428680 A0A087WTM6 91 aa4.96□□□□□ -1.62
CNOT4-206ENST00000428680 ATP11AUNQ6ZP68 121 aa4.96□□□□□ -1.62
CNOT4-206ENST00000428680 SERP1Q9Y6X1 66 aa4.96□□□□□ -1.62
CNOT4-206ENST00000428680 H3BT86 120 aa4.96□□□□□ -1.62
CNOT4-206ENST00000428680 TMEM258P61165 79 aa4.96□□□□□ -1.62
CNOT4-206ENST00000428680 Q8N9L7 120 aa4.96□□□□□ -1.62
CNOT4-206ENST00000428680 A0A0B4J2C4 111 aa4.95□□□□□ -1.62
CNOT4-206ENST00000428680 NUPR1O60356 82 aa4.95□□□□□ -1.62
CNOT4-206ENST00000428680 CHTF8P0CG12 524 aa4.95□□□□□ -1.62
CNOT4-206ENST00000428680 TIMM17BO60830 172 aa4.95□□□□□ -1.62
CNOT4-206ENST00000428680 NDUFV3P56181 108 aaKnown RBP4.95□□□□□ -1.62
CNOT4-206ENST00000428680 PHF5AQ7RTV0 110 aaKnown RBP4.95□□□□□ -1.62
CNOT4-206ENST00000428680 RETNLBQ9BQ08 111 aa4.95□□□□□ -1.62
CNOT4-206ENST00000428680 SMIM1B2RUZ4 78 aa4.95□□□□□ -1.62
CNOT4-206ENST00000428680 HIGD1BQ9P298 99 aa4.95□□□□□ -1.62
CNOT4-206ENST00000428680 LINC00528Q8N1L1 170 aa4.94□□□□□ -1.62
CNOT4-206ENST00000428680 C3orf22Q8N5N4 141 aa4.94□□□□□ -1.62
CNOT4-206ENST00000428680 MAPKAPK5-AS1Q8N8E1 139 aa4.94□□□□□ -1.62
CNOT4-206ENST00000428680 A0A087WSZ3 146 aa4.94□□□□□ -1.62
CNOT4-206ENST00000428680 FXYD2P54710 66 aa4.94□□□□□ -1.62
CNOT4-206ENST00000428680 COL12A1Q99715 3063 aa4.94□□□□□ -1.62
CNOT4-206ENST00000428680 MAP1AP78559 2803 aaPredicted RBP4.93□□□□□ -1.62
CNOT4-206ENST00000428680 LINC00167Q96N53 147 aa4.93□□□□□ -1.62
CNOT4-206ENST00000428680 CNFNQ9BYD5 112 aa4.93□□□□□ -1.62
CNOT4-206ENST00000428680 PRR3P79522 188 aaKnown RBP4.93□□□□□ -1.62
CNOT4-206ENST00000428680 LINC01561Q8N1V8 128 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms