RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 SDIM1Q6ZPB5 146 aa5.08□□□□□ -1.6
HMGA1P4-201ENST00000428643 C2orf91Q6ZV80 131 aa5.08□□□□□ -1.6
HMGA1P4-201ENST00000428643 KRTAP4-12Q9BQ66 201 aa5.08□□□□□ -1.6
HMGA1P4-201ENST00000428643 DNAH6Q9C0G6 4158 aa5.08□□□□□ -1.6
HMGA1P4-201ENST00000428643 KRTAP10-1P60331 282 aa5.07□□□□□ -1.6
HMGA1P4-201ENST00000428643 HIST1H4GQ99525 98 aa5.07□□□□□ -1.6
HMGA1P4-201ENST00000428643 SPANXDQ9BXN6 97 aa5.07□□□□□ -1.6
HMGA1P4-201ENST00000428643 SPANXB1Q9NS25 103 aaPredicted RBP5.07□□□□□ -1.6
HMGA1P4-201ENST00000428643 SPANXCQ9NY87 97 aa5.07□□□□□ -1.6
HMGA1P4-201ENST00000428643 HIGD1BQ9P298 99 aa5.07□□□□□ -1.6
HMGA1P4-201ENST00000428643 LINC00474Q9P2X8 69 aa5.07□□□□□ -1.6
HMGA1P4-201ENST00000428643 RYR1P21817 5038 aa5.06□□□□□ -1.6
HMGA1P4-201ENST00000428643 C9orf129Q5T035 196 aaKnown RBP5.06□□□□□ -1.6
HMGA1P4-201ENST00000428643 Q6ZVH6 145 aa5.06□□□□□ -1.6
HMGA1P4-201ENST00000428643 FAM19A5Q7Z5A7 132 aaPredicted RBP5.06□□□□□ -1.6
HMGA1P4-201ENST00000428643 LINC00308Q8TCZ7 52 aa5.06□□□□□ -1.6
HMGA1P4-201ENST00000428643 COPS9Q8WXC6 57 aa5.06□□□□□ -1.6
HMGA1P4-201ENST00000428643 DPH3Q96FX2 82 aa5.06□□□□□ -1.6
HMGA1P4-201ENST00000428643 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.06□□□□□ -1.6
HMGA1P4-201ENST00000428643 DNAH17Q9UFH2 4485 aa5.06□□□□□ -1.6
HMGA1P4-201ENST00000428643 IFITM1P13164 125 aa5.05□□□□□ -1.6
HMGA1P4-201ENST00000428643 HSD52Q0P140 79 aa5.05□□□□□ -1.6
HMGA1P4-201ENST00000428643 LBHQ53QV2 105 aaPredicted RBP5.05□□□□□ -1.6
HMGA1P4-201ENST00000428643 SOSTDC1Q6X4U4 206 aa5.05□□□□□ -1.6
HMGA1P4-201ENST00000428643 SPACA4Q8TDM5 124 aa5.05□□□□□ -1.6
HMGA1P4-201ENST00000428643 FAM168BA1KXE4 195 aa5.04□□□□□ -1.6
HMGA1P4-201ENST00000428643 PANO1I0J062 215 aa5.04□□□□□ -1.6
HMGA1P4-201ENST00000428643 EIF4EBP3O60516 100 aaPredicted RBP5.04□□□□□ -1.6
HMGA1P4-201ENST00000428643 DDTP30046 118 aa5.04□□□□□ -1.6
HMGA1P4-201ENST00000428643 MUSTN1Q8IVN3 82 aa5.04□□□□□ -1.6
HMGA1P4-201ENST00000428643 NKAPP1Q8N9T2 125 aa5.04□□□□□ -1.6
HMGA1P4-201ENST00000428643 DNAH2Q9P225 4427 aa5.04□□□□□ -1.6
HMGA1P4-201ENST00000428643 NCR3O14931 201 aa5.03□□□□□ -1.6
HMGA1P4-201ENST00000428643 RPL24P83731 157 aaKnown RBP5.03□□□□□ -1.6
HMGA1P4-201ENST00000428643 TAL2Q16559 108 aa5.03□□□□□ -1.6
HMGA1P4-201ENST00000428643 SERTAD4-AS1Q5TG53 156 aa5.03□□□□□ -1.6
HMGA1P4-201ENST00000428643 KRTAP5-3Q6L8H2 238 aa5.03□□□□□ -1.6
HMGA1P4-201ENST00000428643 FAT2Q9NYQ8 4349 aa5.03□□□□□ -1.6
HMGA1P4-201ENST00000428643 A0A087WYN8 130 aa5.02□□□□□ -1.61
HMGA1P4-201ENST00000428643 PCP4L1A6NKN8 68 aa5.02□□□□□ -1.61
HMGA1P4-201ENST00000428643 M0QXV9 152 aa5.02□□□□□ -1.61
HMGA1P4-201ENST00000428643 VPREB1P12018 145 aa5.02□□□□□ -1.61
HMGA1P4-201ENST00000428643 CTAG1AP78358 180 aa5.02□□□□□ -1.61
HMGA1P4-201ENST00000428643 HAMPP81172 84 aa5.02□□□□□ -1.61
HMGA1P4-201ENST00000428643 Q6ZSA8 131 aa5.02□□□□□ -1.61
HMGA1P4-201ENST00000428643 CEND1Q8N111 149 aa5.02□□□□□ -1.61
HMGA1P4-201ENST00000428643 Q8NDZ9 215 aa5.02□□□□□ -1.61
HMGA1P4-201ENST00000428643 KRTAP4-2Q9BYR5 136 aa5.02□□□□□ -1.61
HMGA1P4-201ENST00000428643 FAM30AQ9NZY2 134 aa5.02□□□□□ -1.61
HMGA1P4-201ENST00000428643 PCLOQ9Y6V0 5065 aa5.02□□□□□ -1.61
HMGA1P4-201ENST00000428643 TMEM238LA0A1B0GVL6 79 aa5.01□□□□□ -1.61
HMGA1P4-201ENST00000428643 A0A1W2PNN7 141 aa5.01□□□□□ -1.61
HMGA1P4-201ENST00000428643 A4D1N5 150 aa5.01□□□□□ -1.61
HMGA1P4-201ENST00000428643 GAGE10A6NGK3 116 aa5.01□□□□□ -1.61
HMGA1P4-201ENST00000428643 A6NJY4 79 aa5.01□□□□□ -1.61
HMGA1P4-201ENST00000428643 M0R143 59 aa5.01□□□□□ -1.61
HMGA1P4-201ENST00000428643 PRR3P79522 188 aaKnown RBP5.01□□□□□ -1.61
HMGA1P4-201ENST00000428643 SCXQ7RTU7 201 aa5.01□□□□□ -1.61
HMGA1P4-201ENST00000428643 PPDPFQ9H3Y8 114 aa5.01□□□□□ -1.61
HMGA1P4-201ENST00000428643 PLA2G2DQ9UNK4 145 aa5.01□□□□□ -1.61
HMGA1P4-201ENST00000428643 DYNC1H1Q14204 4646 aaKnown RBP5□□□□□ -1.61
HMGA1P4-201ENST00000428643 IGLV5-37A0A075B6J1 123 aa5□□□□□ -1.61
HMGA1P4-201ENST00000428643 LOC107984156A0A0G2JMH3 177 aa5□□□□□ -1.61
HMGA1P4-201ENST00000428643 NDUFC2O95298 119 aa5□□□□□ -1.61
HMGA1P4-201ENST00000428643 HINT1P49773 126 aaPredicted RBP5□□□□□ -1.61
HMGA1P4-201ENST00000428643 FXYD2P54710 66 aa5□□□□□ -1.61
HMGA1P4-201ENST00000428643 KRTAP7-1Q8IUC3 87 aa5□□□□□ -1.61
HMGA1P4-201ENST00000428643 ARL17AQ8IVW1 177 aa5□□□□□ -1.61
HMGA1P4-201ENST00000428643 CIRBP-AS1Q8TBR5 109 aa5□□□□□ -1.61
HMGA1P4-201ENST00000428643 PLAC8Q9NZF1 115 aa5□□□□□ -1.61
HMGA1P4-201ENST00000428643 KIAA1109Q2LD37 5005 aa5□□□□□ -1.61
HMGA1P4-201ENST00000428643 M0R378 163 aa4.99□□□□□ -1.61
HMGA1P4-201ENST00000428643 UBE2BP63146 152 aa4.99□□□□□ -1.61
HMGA1P4-201ENST00000428643 BATFQ16520 125 aa4.99□□□□□ -1.61
HMGA1P4-201ENST00000428643 S100A7L2Q5SY68 101 aa4.99□□□□□ -1.61
HMGA1P4-201ENST00000428643 PHF5AQ7RTV0 110 aaKnown RBP4.99□□□□□ -1.61
HMGA1P4-201ENST00000428643 MRPL55Q7Z7F7 128 aaKnown RBP4.99□□□□□ -1.61
HMGA1P4-201ENST00000428643 OR13C6PQ8NH95 151 aa4.99□□□□□ -1.61
HMGA1P4-201ENST00000428643 C7orf33Q8WU49 177 aa4.99□□□□□ -1.61
HMGA1P4-201ENST00000428643 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
HMGA1P4-201ENST00000428643 C22orf24Q9Y442 160 aa4.99□□□□□ -1.61
HMGA1P4-201ENST00000428643 PKD1P98161 4303 aa4.99□□□□□ -1.61
HMGA1P4-201ENST00000428643 IGKV2-28A0A075B6P5 120 aa4.98□□□□□ -1.61
HMGA1P4-201ENST00000428643 TRBV10-2A0A0K0K1G8 114 aa4.98□□□□□ -1.61
HMGA1P4-201ENST00000428643 A6NDN8 102 aa4.98□□□□□ -1.61
HMGA1P4-201ENST00000428643 RPL37AP8A6NKH3 93 aa4.98□□□□□ -1.61
HMGA1P4-201ENST00000428643 IGKV2D-28P01615 120 aa4.98□□□□□ -1.61
HMGA1P4-201ENST00000428643 BVES-AS1Q5T3Y7 98 aa4.98□□□□□ -1.61
HMGA1P4-201ENST00000428643 RAB37Q96AX2 223 aa4.98□□□□□ -1.61
HMGA1P4-201ENST00000428643 NHP2Q9NX24 153 aaKnown RBP4.98□□□□□ -1.61
HMGA1P4-201ENST00000428643 DNAH11Q96DT5 4516 aa4.98□□□□□ -1.61
HMGA1P4-201ENST00000428643 PKHD1P08F94 4074 aa4.97□□□□□ -1.61
HMGA1P4-201ENST00000428643 TRAV13-2A0A0B4J235 113 aa4.97□□□□□ -1.61
HMGA1P4-201ENST00000428643 TRBV10-3A0A0K0K1G6 114 aa4.97□□□□□ -1.61
HMGA1P4-201ENST00000428643 H7C2G1 150 aa4.97□□□□□ -1.61
HMGA1P4-201ENST00000428643 K7ERJ3 54 aa4.97□□□□□ -1.61
HMGA1P4-201ENST00000428643 RPL13AP40429 203 aaKnown RBP4.97□□□□□ -1.61
HMGA1P4-201ENST00000428643 LINC00337Q8N6G1 96 aa4.97□□□□□ -1.61
HMGA1P4-201ENST00000428643 LINC00167Q96N53 147 aa4.97□□□□□ -1.61
HMGA1P4-201ENST00000428643 A0A0B4J2C4 111 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms