RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 HIST1H2BLQ99880 126 aa14.6□□□□□ -0.07
GLI3-202ENST00000428534 SND1-IT1Q9HBX3 110 aa14.6□□□□□ -0.07
GLI3-202ENST00000428534 UBE2BP63146 152 aa14.59□□□□□ -0.07
GLI3-202ENST00000428534 C22orf24Q9Y442 160 aa14.59□□□□□ -0.07
GLI3-202ENST00000428534 SNRPEP62304 92 aaKnown RBP14.58□□□□□ -0.08
GLI3-202ENST00000428534 TSPEAR-AS2P59090 65 aa14.57□□□□□ -0.08
GLI3-202ENST00000428534 SERTAD4-AS1Q5TG53 156 aa14.57□□□□□ -0.08
GLI3-202ENST00000428534 KRTAP7-1Q8IUC3 87 aa14.57□□□□□ -0.08
GLI3-202ENST00000428534 NKAPP1Q8N9T2 125 aa14.57□□□□□ -0.08
GLI3-202ENST00000428534 IGLV5-37A0A075B6J1 123 aa14.56□□□□□ -0.08
GLI3-202ENST00000428534 SMIM13P0DJ93 91 aa14.56□□□□□ -0.08
GLI3-202ENST00000428534 MRPL55Q7Z7F7 128 aaKnown RBP14.56□□□□□ -0.08
GLI3-202ENST00000428534 C5orf52A6NGY3 159 aa14.55□□□□□ -0.08
GLI3-202ENST00000428534 PSORS1C2Q9UIG4 136 aa14.54□□□□□ -0.08
GLI3-202ENST00000428534 A0A0U1RRA0 63 aa14.53□□□□□ -0.08
GLI3-202ENST00000428534 C1orf137Q5JT78 98 aa14.51□□□□□ -0.09
GLI3-202ENST00000428534 MIR7-3HGQ8N6C7 128 aa14.51□□□□□ -0.09
GLI3-202ENST00000428534 SPINK6Q6UWN8 80 aa14.49□□□□□ -0.09
GLI3-202ENST00000428534 VPREB1P12018 145 aa14.48□□□□□ -0.09
GLI3-202ENST00000428534 LINC00167Q96N53 147 aa14.48□□□□□ -0.09
GLI3-202ENST00000428534 A0A0J9YXY3 114 aa14.47□□□□□ -0.09
GLI3-202ENST00000428534 HSBP1L1C9JCN9 74 aa14.47□□□□□ -0.09
GLI3-202ENST00000428534 MIEN1Q9BRT3 115 aa14.47□□□□□ -0.09
GLI3-202ENST00000428534 ZNF815PA8K554 130 aa14.46□□□□□ -0.09
GLI3-202ENST00000428534 LOC107984156A0A0G2JMH3 177 aa14.45□□□□□ -0.1
GLI3-202ENST00000428534 ARL17AQ8IVW1 177 aa14.45□□□□□ -0.1
GLI3-202ENST00000428534 ATOH7Q8N100 152 aa14.45□□□□□ -0.1
GLI3-202ENST00000428534 TIMM17BO60830 172 aa14.44□□□□□ -0.1
GLI3-202ENST00000428534 HNRNPA3P51991 378 aaKnown RBP14.44□□□□□ -0.1
GLI3-202ENST00000428534 BOD1L2Q8IYS8 172 aa14.44□□□□□ -0.1
GLI3-202ENST00000428534 IGKV2D-26A0A0A0MRZ7 120 aa14.43□□□□□ -0.1
GLI3-202ENST00000428534 OXTP01178 125 aa14.43□□□□□ -0.1
GLI3-202ENST00000428534 IGLV7-43P04211 117 aa14.43□□□□□ -0.1
GLI3-202ENST00000428534 LRP1Q07954 4544 aaKnown RBP14.42□□□□□ -0.1
GLI3-202ENST00000428534 J3QL48 77 aa14.42□□□□□ -0.1
GLI3-202ENST00000428534 SRSF9Q13242 221 aaKnown RBP eCLIP14.42□□□□□ -0.1
GLI3-202ENST00000428534 M0R378 163 aa14.41□□□□□ -0.1
GLI3-202ENST00000428534 SCGB1D1O95968 90 aa14.41□□□□□ -0.1
GLI3-202ENST00000428534 KRTAP11-1Q8IUC1 163 aa14.41□□□□□ -0.1
GLI3-202ENST00000428534 GAGE10A6NGK3 116 aa14.4□□□□□ -0.1
GLI3-202ENST00000428534 RPL37AP8A6NKH3 93 aa14.4□□□□□ -0.1
GLI3-202ENST00000428534 KRTAP29-1A8MX34 341 aaPredicted RBP14.4□□□□□ -0.1
GLI3-202ENST00000428534 ANKRD39Q53RE8 183 aa14.4□□□□□ -0.1
GLI3-202ENST00000428534 REG3GQ6UW15 175 aa14.39□□□□□ -0.11
GLI3-202ENST00000428534 SCGB1D4Q6XE38 83 aa14.39□□□□□ -0.11
GLI3-202ENST00000428534 IGLV1-50A0A075B6I6 118 aa14.38□□□□□ -0.11
GLI3-202ENST00000428534 DAND5Q8N907 189 aa14.38□□□□□ -0.11
GLI3-202ENST00000428534 DIRC1Q969H9 104 aa14.37□□□□□ -0.11
GLI3-202ENST00000428534 FAT3Q8TDW7 4589 aa14.37□□□□□ -0.11
GLI3-202ENST00000428534 BCE1O60756 84 aa14.36□□□□□ -0.11
GLI3-202ENST00000428534 NDUFC2O95298 119 aa14.36□□□□□ -0.11
GLI3-202ENST00000428534 S100A12P80511 92 aa14.36□□□□□ -0.11
GLI3-202ENST00000428534 COPS9Q8WXC6 57 aa14.36□□□□□ -0.11
GLI3-202ENST00000428534 IGKV2-28A0A075B6P5 120 aa14.35□□□□□ -0.11
GLI3-202ENST00000428534 TRBV10-2A0A0K0K1G8 114 aa14.35□□□□□ -0.11
GLI3-202ENST00000428534 TMEM238C9JI98 176 aa14.35□□□□□ -0.11
GLI3-202ENST00000428534 IGKV2D-28P01615 120 aa14.35□□□□□ -0.11
GLI3-202ENST00000428534 ADAMTSL4-AS1Q5T5F5 129 aa14.34□□□□□ -0.11
GLI3-202ENST00000428534 Q8NDZ9 215 aa14.34□□□□□ -0.11
GLI3-202ENST00000428534 ZNF861PO60384 105 aa14.33□□□□□ -0.12
GLI3-202ENST00000428534 RPL28P46779 137 aaKnown RBP14.33□□□□□ -0.12
GLI3-202ENST00000428534 TTTY13Q9BZ97 58 aa14.33□□□□□ -0.12
GLI3-202ENST00000428534 HMCN2Q8NDA2 5059 aa14.32□□□□□ -0.12
GLI3-202ENST00000428534 Q6ZVH6 145 aa14.32□□□□□ -0.12
GLI3-202ENST00000428534 LITAFQ99732 161 aa14.32□□□□□ -0.12
GLI3-202ENST00000428534 SPANXB1Q9NS25 103 aaPredicted RBP14.32□□□□□ -0.12
GLI3-202ENST00000428534 PKHD1L1Q86WI1 4243 aa14.31□□□□□ -0.12
GLI3-202ENST00000428534 NCR3O14931 201 aa14.3□□□□□ -0.12
GLI3-202ENST00000428534 LINC00308Q8TCZ7 52 aa14.3□□□□□ -0.12
GLI3-202ENST00000428534 SPANXDQ9BXN6 97 aa14.3□□□□□ -0.12
GLI3-202ENST00000428534 SPANXCQ9NY87 97 aa14.3□□□□□ -0.12
GLI3-202ENST00000428534 PCP2Q8IVA1 136 aa14.29□□□□□ -0.12
GLI3-202ENST00000428534 TMEM126AQ9H061 195 aa14.29□□□□□ -0.12
GLI3-202ENST00000428534 CBY1Q9Y3M2 126 aa14.29□□□□□ -0.12
GLI3-202ENST00000428534 H0Y9J4 135 aa14.28□□□□□ -0.12
GLI3-202ENST00000428534 PRYO14603 147 aa14.28□□□□□ -0.12
GLI3-202ENST00000428534 IFITM1P13164 125 aa14.28□□□□□ -0.12
GLI3-202ENST00000428534 UBE2AP49459 152 aa14.28□□□□□ -0.12
GLI3-202ENST00000428534 NPC2P61916 151 aa14.27□□□□□ -0.13
GLI3-202ENST00000428534 PPDPFQ9H3Y8 114 aa14.27□□□□□ -0.13
GLI3-202ENST00000428534 JOSD1Q15040 202 aaPredicted RBP14.26□□□□□ -0.13
GLI3-202ENST00000428534 SOSTDC1Q6X4U4 206 aa14.26□□□□□ -0.13
GLI3-202ENST00000428534 TMA7Q9Y2S6 64 aaKnown RBP14.26□□□□□ -0.13
GLI3-202ENST00000428534 S100A7L2Q5SY68 101 aa14.25□□□□□ -0.13
GLI3-202ENST00000428534 LINC01600Q96MT4 127 aa14.25□□□□□ -0.13
GLI3-202ENST00000428534 KCNQ1DNQ9H478 68 aa14.25□□□□□ -0.13
GLI3-202ENST00000428534 DDTP30046 118 aa14.24□□□□□ -0.13
GLI3-202ENST00000428534 LINC00518Q8N0U6 118 aa14.24□□□□□ -0.13
GLI3-202ENST00000428534 FAM19A1Q7Z5A9 133 aa14.23□□□□□ -0.13
GLI3-202ENST00000428534 TRBV10-3A0A0K0K1G6 114 aa14.22□□□□□ -0.13
GLI3-202ENST00000428534 UBR4Q5T4S7 5183 aa14.2□□□□□ -0.14
GLI3-202ENST00000428534 LINC00337Q8N6G1 96 aa14.2□□□□□ -0.14
GLI3-202ENST00000428534 VAMP8Q9BV40 100 aa14.2□□□□□ -0.14
GLI3-202ENST00000428534 KRTAP13-1Q8IUC0 172 aa14.19□□□□□ -0.14
GLI3-202ENST00000428534 EIF4EBP3O60516 100 aaPredicted RBP14.18□□□□□ -0.14
GLI3-202ENST00000428534 IGLV6-57P01721 117 aa14.18□□□□□ -0.14
GLI3-202ENST00000428534 COX8AP10176 69 aa14.18□□□□□ -0.14
GLI3-202ENST00000428534 SPRR1AP35321 89 aa14.18□□□□□ -0.14
GLI3-202ENST00000428534 DLEU1O43261 78 aa14.17□□□□□ -0.14
GLI3-202ENST00000428534 ETDCA0A1B0GVM5 59 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms