RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 SMCR5Q8TEV8 140 aa4.74□□□□□ -1.65
LSG1-202ENST00000427461 GEMIN7Q9H840 131 aaKnown RBP4.74□□□□□ -1.65
LSG1-202ENST00000427461 GATCO43716 136 aaKnown RBP4.73□□□□□ -1.65
LSG1-202ENST00000427461 IFI27P40305 119 aaPredicted RBP4.73□□□□□ -1.65
LSG1-202ENST00000427461 KRTAP10-10P60014 251 aa4.73□□□□□ -1.65
LSG1-202ENST00000427461 LINC00483Q53H64 154 aa4.73□□□□□ -1.65
LSG1-202ENST00000427461 GAGE2AQ6NT46 116 aa4.73□□□□□ -1.65
LSG1-202ENST00000427461 LINC01551Q86U37 167 aa4.73□□□□□ -1.65
LSG1-202ENST00000427461 Q8NDZ9 215 aa4.73□□□□□ -1.65
LSG1-202ENST00000427461 BORCS7Q96B45 105 aa4.73□□□□□ -1.65
LSG1-202ENST00000427461 MANBALQ9NQG1 85 aa4.73□□□□□ -1.65
LSG1-202ENST00000427461 A0A1B0GUT8 65 aa4.72□□□□□ -1.65
LSG1-202ENST00000427461 A8MWL6 223 aa4.72□□□□□ -1.65
LSG1-202ENST00000427461 PPP1R17O96001 155 aa4.72□□□□□ -1.65
LSG1-202ENST00000427461 MT-ND4LP03901 98 aa4.72□□□□□ -1.65
LSG1-202ENST00000427461 NPSP0C0P6 89 aa4.72□□□□□ -1.65
LSG1-202ENST00000427461 TEX43Q6ZNM6 134 aa4.72□□□□□ -1.65
LSG1-202ENST00000427461 TMEM141Q96I45 108 aa4.72□□□□□ -1.65
LSG1-202ENST00000427461 TIMM17AQ99595 171 aa4.72□□□□□ -1.65
LSG1-202ENST00000427461 RPS10P5Q9NQ39 176 aa4.72□□□□□ -1.65
LSG1-202ENST00000427461 CDKN2A-AS1Q9UH64 79 aa4.72□□□□□ -1.65
LSG1-202ENST00000427461 TMEM250H0YL14 139 aa4.71□□□□□ -1.66
LSG1-202ENST00000427461 MRPL51Q4U2R6 128 aaKnown RBP4.71□□□□□ -1.66
LSG1-202ENST00000427461 YPEL4Q96NS1 127 aa4.71□□□□□ -1.66
LSG1-202ENST00000427461 HIGD1CA8MV81 97 aa4.7□□□□□ -1.66
LSG1-202ENST00000427461 CXCL5P42830 114 aa4.7□□□□□ -1.66
LSG1-202ENST00000427461 C20orf78Q9BR46 151 aa4.7□□□□□ -1.66
LSG1-202ENST00000427461 SMIM2Q9BVW6 85 aa4.7□□□□□ -1.66
LSG1-202ENST00000427461 PYGO1Q9Y3Y4 419 aa4.7□□□□□ -1.66
LSG1-202ENST00000427461 TRBV24-1A0A075B6N3 115 aa4.69□□□□□ -1.66
LSG1-202ENST00000427461 PDE6DO43924 150 aa4.69□□□□□ -1.66
LSG1-202ENST00000427461 RAB5AP20339 215 aa4.69□□□□□ -1.66
LSG1-202ENST00000427461 CEBPGP53567 150 aa4.69□□□□□ -1.66
LSG1-202ENST00000427461 LCE4AQ5TA78 99 aa4.69□□□□□ -1.66
LSG1-202ENST00000427461 C2orf88Q9BSF0 95 aa4.69□□□□□ -1.66
LSG1-202ENST00000427461 NAT8Q9UHE5 227 aa4.69□□□□□ -1.66
LSG1-202ENST00000427461 PFN2P35080 140 aa4.68□□□□□ -1.66
LSG1-202ENST00000427461 LCE3BQ5TA77 95 aa4.68□□□□□ -1.66
LSG1-202ENST00000427461 FAM19A3Q7Z5A8 133 aa4.68□□□□□ -1.66
LSG1-202ENST00000427461 AMELXQ99217 191 aa4.68□□□□□ -1.66
LSG1-202ENST00000427461 SMIM7Q9BQ49 75 aa4.68□□□□□ -1.66
LSG1-202ENST00000427461 CHTOPQ9Y3Y2 248 aaKnown RBP4.68□□□□□ -1.66
LSG1-202ENST00000427461 ERC2-IT1O76042 136 aa4.67□□□□□ -1.66
LSG1-202ENST00000427461 FAM104BQ5XKR9 115 aa4.67□□□□□ -1.66
LSG1-202ENST00000427461 HRCT1Q6UXD1 115 aa4.67□□□□□ -1.66
LSG1-202ENST00000427461 C2orf66Q6UXQ4 117 aa4.67□□□□□ -1.66
LSG1-202ENST00000427461 COX7B2Q8TF08 81 aa4.67□□□□□ -1.66
LSG1-202ENST00000427461 SND1-IT1Q9HBX3 110 aa4.67□□□□□ -1.66
LSG1-202ENST00000427461 SMIM1B2RUZ4 78 aa4.66□□□□□ -1.66
LSG1-202ENST00000427461 NPYP01303 97 aa4.66□□□□□ -1.66
LSG1-202ENST00000427461 CKS2P33552 79 aa4.66□□□□□ -1.66
LSG1-202ENST00000427461 RPL23P62829 140 aaKnown RBP4.66□□□□□ -1.66
LSG1-202ENST00000427461 RPL24P83731 157 aaKnown RBP4.66□□□□□ -1.66
LSG1-202ENST00000427461 C9orf153Q5TBE3 101 aa4.66□□□□□ -1.66
LSG1-202ENST00000427461 VCX2Q9H322 139 aa4.66□□□□□ -1.66
LSG1-202ENST00000427461 LGALS3P17931 250 aaKnown RBP4.65□□□□□ -1.67
LSG1-202ENST00000427461 PCP4P48539 62 aa4.65□□□□□ -1.67
LSG1-202ENST00000427461 HERVK_113P63121 156 aa4.65□□□□□ -1.67
LSG1-202ENST00000427461 RIGQ13278 110 aa4.65□□□□□ -1.67
LSG1-202ENST00000427461 ADIRFQ15847 76 aa4.65□□□□□ -1.67
LSG1-202ENST00000427461 C5orf52A6NGY3 159 aa4.64□□□□□ -1.67
LSG1-202ENST00000427461 D6R8Y8 96 aa4.64□□□□□ -1.67
LSG1-202ENST00000427461 PRYO14603 147 aa4.64□□□□□ -1.67
LSG1-202ENST00000427461 KIAA1644Q3SXP7 199 aa4.64□□□□□ -1.67
LSG1-202ENST00000427461 KMT2DO14686 5537 aa4.64□□□□□ -1.67
LSG1-202ENST00000427461 C20orf202A1L168 122 aa4.63□□□□□ -1.67
LSG1-202ENST00000427461 LOC389332A0A1B0GUA5 103 aa4.62□□□□□ -1.67
LSG1-202ENST00000427461 S100A6P06703 90 aa4.62□□□□□ -1.67
LSG1-202ENST00000427461 S100PP25815 95 aa4.62□□□□□ -1.67
LSG1-202ENST00000427461 SPRR1AP35321 89 aa4.62□□□□□ -1.67
LSG1-202ENST00000427461 SNRPEP62304 92 aaKnown RBP4.62□□□□□ -1.67
LSG1-202ENST00000427461 PDZD11Q5EBL8 140 aa4.62□□□□□ -1.67
LSG1-202ENST00000427461 LINC00518Q8N0U6 118 aa4.62□□□□□ -1.67
LSG1-202ENST00000427461 LIMD2Q9BT23 127 aa4.62□□□□□ -1.67
LSG1-202ENST00000427461 ETDCA0A1B0GVM5 59 aa4.61□□□□□ -1.67
LSG1-202ENST00000427461 TRGC2P03986 189 aa4.61□□□□□ -1.67
LSG1-202ENST00000427461 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
LSG1-202ENST00000427461 SPINK8P0C7L1 97 aa4.61□□□□□ -1.67
LSG1-202ENST00000427461 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
LSG1-202ENST00000427461 TRAV9-1A0A075B6T8 112 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 HIST1H2BKO60814 126 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 ATP5LO75964 103 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 S100A8P05109 93 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 HIST1H2BJP06899 126 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 HIST1H2BOP23527 126 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 HIST1H2BBP33778 126 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 AKR1D1P51857 326 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 HIST1H2BDP58876 126 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 HIST1H2BCP62807 126 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 SEC11AP67812 179 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 FABP9Q0Z7S8 132 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 HIST2H2BEQ16778 126 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.6□□□□□ -1.67
LSG1-202ENST00000427461 HIST1H2BHQ93079 126 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 HIST1H2BNQ99877 126 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 HIST1H2BMQ99879 126 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 OSTCQ9NRP0 149 aa4.6□□□□□ -1.67
LSG1-202ENST00000427461 IGIPA6NJ69 53 aa4.59□□□□□ -1.67
LSG1-202ENST00000427461 NDUFA6P56556 154 aa4.59□□□□□ -1.67
LSG1-202ENST00000427461 COA6Q5JTJ3 125 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms