RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 IGLV5-37A0A075B6J1 123 aa15.51■□□□□ 0.07
HERPUD2-205ENST00000427455 LINC00587B1AMM8 73 aa15.51■□□□□ 0.07
HERPUD2-205ENST00000427455 E9PLD3 99 aa15.51■□□□□ 0.07
HERPUD2-205ENST00000427455 S100A6P06703 90 aa15.51■□□□□ 0.07
HERPUD2-205ENST00000427455 C1orf137Q5JT78 98 aa15.51■□□□□ 0.07
HERPUD2-205ENST00000427455 MRPL55Q7Z7F7 128 aaKnown RBP15.51■□□□□ 0.07
HERPUD2-205ENST00000427455 HIST3H2BBQ8N257 126 aa15.51■□□□□ 0.07
HERPUD2-205ENST00000427455 C20orf202A1L168 122 aa15.5■□□□□ 0.07
HERPUD2-205ENST00000427455 SMIM13P0DJ93 91 aa15.5■□□□□ 0.07
HERPUD2-205ENST00000427455 DMBT1Q9UGM3 2413 aaPredicted RBP15.5■□□□□ 0.07
HERPUD2-205ENST00000427455 FAT3Q8TDW7 4589 aa15.5■□□□□ 0.07
HERPUD2-205ENST00000427455 LRP1Q07954 4544 aaKnown RBP15.49■□□□□ 0.07
HERPUD2-205ENST00000427455 A0A0U1RRA0 63 aa15.49■□□□□ 0.07
HERPUD2-205ENST00000427455 S100A2P29034 98 aa15.49■□□□□ 0.07
HERPUD2-205ENST00000427455 NKAPP1Q8N9T2 125 aa15.49■□□□□ 0.07
HERPUD2-205ENST00000427455 KRTAP29-1A8MX34 341 aaPredicted RBP15.46■□□□□ 0.07
HERPUD2-205ENST00000427455 HIST1H2BLQ99880 126 aa15.46■□□□□ 0.07
HERPUD2-205ENST00000427455 VPREB1P12018 145 aa15.45■□□□□ 0.06
HERPUD2-205ENST00000427455 RPL24P83731 157 aaKnown RBP15.45■□□□□ 0.06
HERPUD2-205ENST00000427455 SPINK6Q6UWN8 80 aa15.45■□□□□ 0.06
HERPUD2-205ENST00000427455 MIR7-3HGQ8N6C7 128 aa15.45■□□□□ 0.06
HERPUD2-205ENST00000427455 OXTP01178 125 aa15.44■□□□□ 0.06
HERPUD2-205ENST00000427455 SRSF9Q13242 221 aaKnown RBP eCLIP15.44■□□□□ 0.06
HERPUD2-205ENST00000427455 LINC00167Q96N53 147 aa15.44■□□□□ 0.06
HERPUD2-205ENST00000427455 AKR1D1P51857 326 aa15.43■□□□□ 0.06
HERPUD2-205ENST00000427455 IGLV7-43P04211 117 aa15.42■□□□□ 0.06
HERPUD2-205ENST00000427455 GAGE10A6NGK3 116 aa15.41■□□□□ 0.06
HERPUD2-205ENST00000427455 J3QL48 77 aa15.4■□□□□ 0.06
HERPUD2-205ENST00000427455 Q8NDZ9 215 aa15.4■□□□□ 0.06
HERPUD2-205ENST00000427455 SNRPEP62304 92 aaKnown RBP15.39■□□□□ 0.05
HERPUD2-205ENST00000427455 RPL37AP8A6NKH3 93 aa15.38■□□□□ 0.05
HERPUD2-205ENST00000427455 A0A0J9YXY3 114 aa15.37■□□□□ 0.05
HERPUD2-205ENST00000427455 IGKV2D-26A0A0A0MRZ7 120 aa15.36■□□□□ 0.05
HERPUD2-205ENST00000427455 BOD1L2Q8IYS8 172 aa15.36■□□□□ 0.05
HERPUD2-205ENST00000427455 ATOH7Q8N100 152 aa15.36■□□□□ 0.05
HERPUD2-205ENST00000427455 C5orf52A6NGY3 159 aa15.35■□□□□ 0.05
HERPUD2-205ENST00000427455 DAND5Q8N907 189 aa15.35■□□□□ 0.05
HERPUD2-205ENST00000427455 REG3GQ6UW15 175 aa15.34■□□□□ 0.05
HERPUD2-205ENST00000427455 IGKV2-28A0A075B6P5 120 aa15.33■□□□□ 0.04
HERPUD2-205ENST00000427455 ZNF815PA8K554 130 aa15.33■□□□□ 0.04
HERPUD2-205ENST00000427455 IGKV2D-28P01615 120 aa15.33■□□□□ 0.04
HERPUD2-205ENST00000427455 HERC1Q15751 4861 aa15.32■□□□□ 0.04
HERPUD2-205ENST00000427455 LOC107984156A0A0G2JMH3 177 aa15.32■□□□□ 0.04
HERPUD2-205ENST00000427455 ARL17AQ8IVW1 177 aa15.32■□□□□ 0.04
HERPUD2-205ENST00000427455 DIRC1Q969H9 104 aa15.32■□□□□ 0.04
HERPUD2-205ENST00000427455 IGLV1-50A0A075B6I6 118 aa15.31■□□□□ 0.04
HERPUD2-205ENST00000427455 BCE1O60756 84 aa15.31■□□□□ 0.04
HERPUD2-205ENST00000427455 ANKRD39Q53RE8 183 aa15.31■□□□□ 0.04
HERPUD2-205ENST00000427455 MIEN1Q9BRT3 115 aa15.31■□□□□ 0.04
HERPUD2-205ENST00000427455 M0R378 163 aa15.3■□□□□ 0.04
HERPUD2-205ENST00000427455 TTTY13Q9BZ97 58 aa15.3■□□□□ 0.04
HERPUD2-205ENST00000427455 H0Y9J4 135 aa15.28■□□□□ 0.04
HERPUD2-205ENST00000427455 ZNF861PO60384 105 aa15.28■□□□□ 0.04
HERPUD2-205ENST00000427455 TIMM17BO60830 172 aa15.28■□□□□ 0.04
HERPUD2-205ENST00000427455 NCR3O14931 201 aa15.27■□□□□ 0.04
HERPUD2-205ENST00000427455 ADAMTSL4-AS1Q5T5F5 129 aa15.27■□□□□ 0.04
HERPUD2-205ENST00000427455 LINC01600Q96MT4 127 aa15.26■□□□□ 0.03
HERPUD2-205ENST00000427455 LITAFQ99732 161 aa15.26■□□□□ 0.03
HERPUD2-205ENST00000427455 RPL28P46779 137 aaKnown RBP15.25■□□□□ 0.03
HERPUD2-205ENST00000427455 TMEM126AQ9H061 195 aa15.24■□□□□ 0.03
HERPUD2-205ENST00000427455 TMEM238C9JI98 176 aa15.23■□□□□ 0.03
HERPUD2-205ENST00000427455 NDUFC2O95298 119 aa15.22■□□□□ 0.03
HERPUD2-205ENST00000427455 MT1HL1P0DM35 61 aa15.22■□□□□ 0.03
HERPUD2-205ENST00000427455 NPC2P61916 151 aa15.22■□□□□ 0.03
HERPUD2-205ENST00000427455 SOSTDC1Q6X4U4 206 aa15.22■□□□□ 0.03
HERPUD2-205ENST00000427455 TRBV10-2A0A0K0K1G8 114 aa15.21■□□□□ 0.03
HERPUD2-205ENST00000427455 HSBP1L1C9JCN9 74 aa15.21■□□□□ 0.03
HERPUD2-205ENST00000427455 SCGB1D4Q6XE38 83 aa15.21■□□□□ 0.03
HERPUD2-205ENST00000427455 SPANXB1Q9NS25 103 aaPredicted RBP15.21■□□□□ 0.03
HERPUD2-205ENST00000427455 TNXBP22105 4242 aa15.21■□□□□ 0.02
HERPUD2-205ENST00000427455 UBE2AP49459 152 aa15.2■□□□□ 0.02
HERPUD2-205ENST00000427455 KRTAP13-1Q8IUC0 172 aa15.2■□□□□ 0.02
HERPUD2-205ENST00000427455 SCGB1D1O95968 90 aa15.19■□□□□ 0.02
HERPUD2-205ENST00000427455 PCP2Q8IVA1 136 aa15.19■□□□□ 0.02
HERPUD2-205ENST00000427455 PRYO14603 147 aa15.18■□□□□ 0.02
HERPUD2-205ENST00000427455 EIF4EBP3O60516 100 aaPredicted RBP15.18■□□□□ 0.02
HERPUD2-205ENST00000427455 LINC00308Q8TCZ7 52 aa15.18■□□□□ 0.02
HERPUD2-205ENST00000427455 TRBV10-3A0A0K0K1G6 114 aa15.17■□□□□ 0.02
HERPUD2-205ENST00000427455 FAM19A1Q7Z5A9 133 aa15.16■□□□□ 0.02
HERPUD2-205ENST00000427455 SPANXDQ9BXN6 97 aa15.15■□□□□ 0.02
HERPUD2-205ENST00000427455 KCNQ1DNQ9H478 68 aa15.15■□□□□ 0.02
HERPUD2-205ENST00000427455 SPANXCQ9NY87 97 aa15.15■□□□□ 0.02
HERPUD2-205ENST00000427455 S100A12P80511 92 aa15.14■□□□□ 0.01
HERPUD2-205ENST00000427455 PRLHP81277 87 aa15.14■□□□□ 0.01
HERPUD2-205ENST00000427455 KRTAP1-4P0C5Y4 121 aa15.13■□□□□ 0.01
HERPUD2-205ENST00000427455 DDTP30046 118 aa15.13■□□□□ 0.01
HERPUD2-205ENST00000427455 S100A7L2Q5SY68 101 aa15.11■□□□□ 0.01
HERPUD2-205ENST00000427455 IGLV6-57P01721 117 aa15.1■□□□□ 0.01
HERPUD2-205ENST00000427455 SPRR1AP35321 89 aa15.1■□□□□ 0.01
HERPUD2-205ENST00000427455 KRTAP10-8P60410 259 aa15.1■□□□□ 0.01
HERPUD2-205ENST00000427455 COPS9Q8WXC6 57 aa15.1■□□□□ 0.01
HERPUD2-205ENST00000427455 Q6ZVH6 145 aa15.09■□□□□ 0.01
HERPUD2-205ENST00000427455 LINC00337Q8N6G1 96 aa15.09■□□□□ 0.01
HERPUD2-205ENST00000427455 IFITM1P13164 125 aa15.07■□□□□ 0
HERPUD2-205ENST00000427455 PPDPFQ9H3Y8 114 aa15.07■□□□□ 0
HERPUD2-205ENST00000427455 TMA7Q9Y2S6 64 aaKnown RBP15.06■□□□□ 0
HERPUD2-205ENST00000427455 ETDCA0A1B0GVM5 59 aa15.05■□□□□ -0
HERPUD2-205ENST00000427455 KRTAP4-16G5E9R7 235 aaPredicted RBP15.05■□□□□ -0
HERPUD2-205ENST00000427455 PRR26Q8N8Z3 221 aa15.05■□□□□ -0
HERPUD2-205ENST00000427455 TRAV23DV6A0A075B6W5 121 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms