RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 ZNF815PA8K554 130 aa9.88□□□□□ -0.83
COL11A1-204ENST00000427239 J3QR89 54 aa9.88□□□□□ -0.83
COL11A1-204ENST00000427239 KRTAP10-1P60331 282 aa9.88□□□□□ -0.83
COL11A1-204ENST00000427239 RAB37Q96AX2 223 aa9.88□□□□□ -0.83
COL11A1-204ENST00000427239 PFN2P35080 140 aa9.87□□□□□ -0.83
COL11A1-204ENST00000427239 RPL18AQ02543 176 aaKnown RBP9.87□□□□□ -0.83
COL11A1-204ENST00000427239 Q6ZRP5 223 aa9.87□□□□□ -0.83
COL11A1-204ENST00000427239 CIRBPQ14011 172 aaKnown RBP9.87□□□□□ -0.83
COL11A1-204ENST00000427239 MEIG1Q5JSS6 88 aa9.87□□□□□ -0.83
COL11A1-204ENST00000427239 PCP2Q8IVA1 136 aa9.87□□□□□ -0.83
COL11A1-204ENST00000427239 A0A0J9YXY3 114 aa9.86□□□□□ -0.83
COL11A1-204ENST00000427239 LINC00158P58513 81 aa9.86□□□□□ -0.83
COL11A1-204ENST00000427239 GAGE2BQ13066 116 aa9.86□□□□□ -0.83
COL11A1-204ENST00000427239 SIGMAR1Q99720 223 aa9.86□□□□□ -0.83
COL11A1-204ENST00000427239 TTTY13Q9BZ97 58 aa9.86□□□□□ -0.83
COL11A1-204ENST00000427239 A0A096LNI7 61 aa9.85□□□□□ -0.83
COL11A1-204ENST00000427239 NAA38Q9BRA0 125 aaKnown RBP9.85□□□□□ -0.83
COL11A1-204ENST00000427239 EPPK1P58107 5090 aaKnown RBP9.85□□□□□ -0.83
COL11A1-204ENST00000427239 RPL24P83731 157 aaKnown RBP9.85□□□□□ -0.83
COL11A1-204ENST00000427239 GAGE2EQ4V326 116 aa9.85□□□□□ -0.83
COL11A1-204ENST00000427239 Q6ZSA8 131 aa9.85□□□□□ -0.83
COL11A1-204ENST00000427239 DPH3Q96FX2 82 aa9.85□□□□□ -0.83
COL11A1-204ENST00000427239 GAGE2DQ9UEU5 116 aa9.85□□□□□ -0.83
COL11A1-204ENST00000427239 IGKV2-24A0A0C4DH68 120 aa9.84□□□□□ -0.83
COL11A1-204ENST00000427239 A0A1B0GV72 72 aa9.84□□□□□ -0.83
COL11A1-204ENST00000427239 SCGB1D4Q6XE38 83 aa9.84□□□□□ -0.83
COL11A1-204ENST00000427239 F8W1H4 67 aa9.83□□□□□ -0.84
COL11A1-204ENST00000427239 TAL2Q16559 108 aa9.83□□□□□ -0.84
COL11A1-204ENST00000427239 A0A0U1RRA0 63 aa9.82□□□□□ -0.84
COL11A1-204ENST00000427239 TIMM17BO60830 172 aa9.82□□□□□ -0.84
COL11A1-204ENST00000427239 SPACA4Q8TDM5 124 aa9.82□□□□□ -0.84
COL11A1-204ENST00000427239 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.82□□□□□ -0.84
COL11A1-204ENST00000427239 LRP1BQ9NZR2 4599 aa9.82□□□□□ -0.84
COL11A1-204ENST00000427239 FXYD2P54710 66 aa9.82□□□□□ -0.84
COL11A1-204ENST00000427239 FAM30AQ9NZY2 134 aa9.82□□□□□ -0.84
COL11A1-204ENST00000427239 DYNC1H1Q14204 4646 aaKnown RBP9.82□□□□□ -0.84
COL11A1-204ENST00000427239 CHTF8P0CG12 524 aa9.81□□□□□ -0.84
COL11A1-204ENST00000427239 CEND1Q8N111 149 aa9.81□□□□□ -0.84
COL11A1-204ENST00000427239 PANO1I0J062 215 aa9.8□□□□□ -0.84
COL11A1-204ENST00000427239 MIR7-3HGQ8N6C7 128 aa9.8□□□□□ -0.84
COL11A1-204ENST00000427239 SND1-IT1Q9HBX3 110 aa9.8□□□□□ -0.84
COL11A1-204ENST00000427239 XAGE1AQ9HD64 81 aa9.8□□□□□ -0.84
COL11A1-204ENST00000427239 C9orf129Q5T035 196 aaKnown RBP9.79□□□□□ -0.84
COL11A1-204ENST00000427239 ADAMTSL4-AS1Q5T5F5 129 aa9.79□□□□□ -0.84
COL11A1-204ENST00000427239 SVIPQ8NHG7 77 aa9.79□□□□□ -0.84
COL11A1-204ENST00000427239 LITAFQ99732 161 aa9.79□□□□□ -0.84
COL11A1-204ENST00000427239 SPANXB1Q9NS25 103 aaPredicted RBP9.79□□□□□ -0.84
COL11A1-204ENST00000427239 NHP2Q9NX24 153 aaKnown RBP9.78□□□□□ -0.84
COL11A1-204ENST00000427239 A0A087WYN8 130 aa9.77□□□□□ -0.85
COL11A1-204ENST00000427239 LOC107984156A0A0G2JMH3 177 aa9.76□□□□□ -0.85
COL11A1-204ENST00000427239 ARL17AQ8IVW1 177 aa9.76□□□□□ -0.85
COL11A1-204ENST00000427239 DAND5Q8N907 189 aa9.76□□□□□ -0.85
COL11A1-204ENST00000427239 CIRBP-AS1Q8TBR5 109 aa9.76□□□□□ -0.85
COL11A1-204ENST00000427239 PLAC8Q9NZF1 115 aa9.76□□□□□ -0.85
COL11A1-204ENST00000427239 PLA2G2DQ9UNK4 145 aa9.76□□□□□ -0.85
COL11A1-204ENST00000427239 CDK2AP2O75956 126 aa9.76□□□□□ -0.85
COL11A1-204ENST00000427239 DNAH8Q96JB1 4490 aa9.75□□□□□ -0.85
COL11A1-204ENST00000427239 EPM2AB3EWF7 344 aa9.75□□□□□ -0.85
COL11A1-204ENST00000427239 SCXQ7RTU7 201 aa9.75□□□□□ -0.85
COL11A1-204ENST00000427239 COPS9Q8WXC6 57 aa9.75□□□□□ -0.85
COL11A1-204ENST00000427239 SPANXDQ9BXN6 97 aa9.75□□□□□ -0.85
COL11A1-204ENST00000427239 SPANXCQ9NY87 97 aa9.75□□□□□ -0.85
COL11A1-204ENST00000427239 A0A1W2PNN7 141 aa9.74□□□□□ -0.85
COL11A1-204ENST00000427239 K7ERJ3 54 aa9.74□□□□□ -0.85
COL11A1-204ENST00000427239 XGP55808 180 aa9.74□□□□□ -0.85
COL11A1-204ENST00000427239 MTURNQ8N3F0 131 aa9.74□□□□□ -0.85
COL11A1-204ENST00000427239 FAM168BA1KXE4 195 aa9.73□□□□□ -0.85
COL11A1-204ENST00000427239 IFITM1P13164 125 aa9.73□□□□□ -0.85
COL11A1-204ENST00000427239 SRSF9Q13242 221 aaKnown RBP eCLIP9.73□□□□□ -0.85
COL11A1-204ENST00000427239 LINC00308Q8TCZ7 52 aa9.73□□□□□ -0.85
COL11A1-204ENST00000427239 A0A1B0GWB2 263 aa9.72□□□□□ -0.85
COL11A1-204ENST00000427239 FAM19A5Q7Z5A7 132 aaPredicted RBP9.71□□□□□ -0.85
COL11A1-204ENST00000427239 PPDPFQ9H3Y8 114 aa9.71□□□□□ -0.85
COL11A1-204ENST00000427239 SERTAD4-AS1Q5TG53 156 aa9.7□□□□□ -0.86
COL11A1-204ENST00000427239 KRTAP7-1Q8IUC3 87 aa9.7□□□□□ -0.86
COL11A1-204ENST00000427239 HIST1H4GQ99525 98 aa9.7□□□□□ -0.86
COL11A1-204ENST00000427239 IGLV5-37A0A075B6J1 123 aa9.7□□□□□ -0.86
COL11A1-204ENST00000427239 NPC2P61916 151 aa9.7□□□□□ -0.86
COL11A1-204ENST00000427239 PRO0461Q9UI25 63 aa9.7□□□□□ -0.86
COL11A1-204ENST00000427239 C22orf24Q9Y442 160 aa9.7□□□□□ -0.86
COL11A1-204ENST00000427239 H3BMG7 143 aa9.69□□□□□ -0.86
COL11A1-204ENST00000427239 NDUFC2O95298 119 aa9.69□□□□□ -0.86
COL11A1-204ENST00000427239 VPREB1P12018 145 aa9.69□□□□□ -0.86
COL11A1-204ENST00000427239 ETDBQ3ZM63 59 aa9.69□□□□□ -0.86
COL11A1-204ENST00000427239 SOSTDC1Q6X4U4 206 aa9.69□□□□□ -0.86
COL11A1-204ENST00000427239 NKAPP1Q8N9T2 125 aa9.69□□□□□ -0.86
COL11A1-204ENST00000427239 APOBP04114 4563 aaKnown RBP9.69□□□□□ -0.86
COL11A1-204ENST00000427239 TMEM238LA0A1B0GVL6 79 aa9.68□□□□□ -0.86
COL11A1-204ENST00000427239 M0QXV9 152 aa9.68□□□□□ -0.86
COL11A1-204ENST00000427239 EIF4EBP3O60516 100 aaPredicted RBP9.68□□□□□ -0.86
COL11A1-204ENST00000427239 HAMPP81172 84 aa9.68□□□□□ -0.86
COL11A1-204ENST00000427239 LYRM7Q5U5X0 104 aa9.68□□□□□ -0.86
COL11A1-204ENST00000427239 MUSTN1Q8IVN3 82 aa9.68□□□□□ -0.86
COL11A1-204ENST00000427239 A6NJY4 79 aa9.68□□□□□ -0.86
COL11A1-204ENST00000427239 MRPL55Q7Z7F7 128 aaKnown RBP9.67□□□□□ -0.86
COL11A1-204ENST00000427239 Q8NDZ9 215 aa9.66□□□□□ -0.86
COL11A1-204ENST00000427239 M0R378 163 aa9.65□□□□□ -0.86
COL11A1-204ENST00000427239 PHF5AQ7RTV0 110 aaKnown RBP9.65□□□□□ -0.86
COL11A1-204ENST00000427239 C7orf33Q8WU49 177 aa9.65□□□□□ -0.86
COL11A1-204ENST00000427239 TRBV10-2A0A0K0K1G8 114 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms