RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 KRTAP26-1Q6PEX3 210 aa12.89□□□□□ -0.35
SNX17-202ENST00000427123 OBSCN-AS1Q96MR7 158 aa12.89□□□□□ -0.35
SNX17-202ENST00000427123 SLPIP03973 132 aa12.88□□□□□ -0.35
SNX17-202ENST00000427123 Q8N814 137 aa12.88□□□□□ -0.35
SNX17-202ENST00000427123 ZNF561-AS1K7EIQ3 104 aa12.87□□□□□ -0.35
SNX17-202ENST00000427123 LINC01556Q5JQF7 62 aa12.87□□□□□ -0.35
SNX17-202ENST00000427123 C6orf99Q4VX62 202 aa12.86□□□□□ -0.35
SNX17-202ENST00000427123 GAGE2AQ6NT46 116 aa12.86□□□□□ -0.35
SNX17-202ENST00000427123 C9orf129Q5T035 196 aaKnown RBP12.85□□□□□ -0.35
SNX17-202ENST00000427123 SDIM1Q6ZPB5 146 aa12.85□□□□□ -0.35
SNX17-202ENST00000427123 CAMK2N2Q96S95 79 aa12.85□□□□□ -0.35
SNX17-202ENST00000427123 TRBV7-7A0A0K0K1E9 115 aa12.84□□□□□ -0.35
SNX17-202ENST00000427123 IGLV6-57P01721 117 aa12.84□□□□□ -0.35
SNX17-202ENST00000427123 HIGD2BQ4VC39 106 aa12.84□□□□□ -0.35
SNX17-202ENST00000427123 DNAH3Q8TD57 4116 aa12.84□□□□□ -0.35
SNX17-202ENST00000427123 SMCR5Q8TEV8 140 aa12.84□□□□□ -0.35
SNX17-202ENST00000427123 C14orf132Q9NPU4 83 aa12.84□□□□□ -0.35
SNX17-202ENST00000427123 RPL18AQ02543 176 aaKnown RBP12.83□□□□□ -0.36
SNX17-202ENST00000427123 LINC00643Q86TS7 51 aa12.83□□□□□ -0.36
SNX17-202ENST00000427123 C15orf56Q8N910 161 aa12.83□□□□□ -0.36
SNX17-202ENST00000427123 ANAPC13Q9BS18 74 aa12.83□□□□□ -0.36
SNX17-202ENST00000427123 C1orf43Q9BWL3 253 aa12.83□□□□□ -0.36
SNX17-202ENST00000427123 FBN1P35555 2871 aaKnown RBP12.82□□□□□ -0.36
SNX17-202ENST00000427123 C2orf48Q96LS8 159 aa12.82□□□□□ -0.36
SNX17-202ENST00000427123 NDUFV3P56181 108 aaKnown RBP12.81□□□□□ -0.36
SNX17-202ENST00000427123 MAST4O15021 2626 aa12.81□□□□□ -0.36
SNX17-202ENST00000427123 LINC00575Q6W349 94 aa12.81□□□□□ -0.36
SNX17-202ENST00000427123 TMEM256-PLSCR3K7ERE1 68 aa12.8□□□□□ -0.36
SNX17-202ENST00000427123 XAGE1AQ9HD64 81 aa12.8□□□□□ -0.36
SNX17-202ENST00000427123 TRAV10A0A0B4J240 114 aa12.79□□□□□ -0.36
SNX17-202ENST00000427123 F8WDY8 70 aa12.79□□□□□ -0.36
SNX17-202ENST00000427123 Q6ZRU5 148 aa12.79□□□□□ -0.36
SNX17-202ENST00000427123 IMUPQ9GZP8 106 aa12.79□□□□□ -0.36
SNX17-202ENST00000427123 STAB1Q9NY15 2570 aa12.79□□□□□ -0.36
SNX17-202ENST00000427123 DNAH10OSP0CZ25 163 aa12.78□□□□□ -0.36
SNX17-202ENST00000427123 IGKV2D-24A0A075B6R9 120 aa12.78□□□□□ -0.36
SNX17-202ENST00000427123 JMJD7-PLA2G4BH0Y9G9 81 aa12.78□□□□□ -0.36
SNX17-202ENST00000427123 TM2D3Q9BRN9 247 aa12.77□□□□□ -0.37
SNX17-202ENST00000427123 ANK2Q01484 3957 aa12.76□□□□□ -0.37
SNX17-202ENST00000427123 TRBV10-3A0A0K0K1G6 114 aa12.76□□□□□ -0.37
SNX17-202ENST00000427123 TENM3Q9P273 2699 aa12.76□□□□□ -0.37
SNX17-202ENST00000427123 TRAV23DV6A0A075B6W5 121 aa12.76□□□□□ -0.37
SNX17-202ENST00000427123 hADV29S1A0JD25 119 aa12.75□□□□□ -0.37
SNX17-202ENST00000427123 NDUFC2-KCTD14E9PQ53 114 aa12.75□□□□□ -0.37
SNX17-202ENST00000427123 PKD1L1Q8TDX9 2849 aa12.75□□□□□ -0.37
SNX17-202ENST00000427123 VPREB1P12018 145 aa12.74□□□□□ -0.37
SNX17-202ENST00000427123 NHLRC4P0CG21 123 aaPredicted RBP12.74□□□□□ -0.37
SNX17-202ENST00000427123 DIRC1Q969H9 104 aa12.74□□□□□ -0.37
SNX17-202ENST00000427123 PRB2P02812 416 aaPredicted RBP12.72□□□□□ -0.37
SNX17-202ENST00000427123 K7EIL1 84 aa12.71□□□□□ -0.37
SNX17-202ENST00000427123 CCKP06307 115 aa12.71□□□□□ -0.37
SNX17-202ENST00000427123 M0R378 163 aa12.7□□□□□ -0.38
SNX17-202ENST00000427123 SYCNQ0VAF6 134 aa12.7□□□□□ -0.38
SNX17-202ENST00000427123 LINC00588Q9Y4M8 146 aa12.7□□□□□ -0.38
SNX17-202ENST00000427123 ZNF73O43830 326 aaPredicted RBP12.69□□□□□ -0.38
SNX17-202ENST00000427123 LINC00846Q9NV44 126 aa12.69□□□□□ -0.38
SNX17-202ENST00000427123 TRBV7-6A0A0J9YX20 115 aa12.68□□□□□ -0.38
SNX17-202ENST00000427123 H3BQ85 93 aa12.68□□□□□ -0.38
SNX17-202ENST00000427123 COX7BP24311 80 aa12.67□□□□□ -0.38
SNX17-202ENST00000427123 Q6ZRP5 223 aa12.67□□□□□ -0.38
SNX17-202ENST00000427123 MRAPQ8TCY5 172 aa12.67□□□□□ -0.38
SNX17-202ENST00000427123 ELOF1P60002 83 aaKnown RBP12.66□□□□□ -0.38
SNX17-202ENST00000427123 Q6JHZ5 121 aa12.66□□□□□ -0.38
SNX17-202ENST00000427123 FAM236AA0A1B0GUQ0 79 aa12.65□□□□□ -0.38
SNX17-202ENST00000427123 FAM236BA0A1B0GV22 79 aa12.65□□□□□ -0.38
SNX17-202ENST00000427123 Q6ZQY7 126 aa12.65□□□□□ -0.38
SNX17-202ENST00000427123 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.62□□□□□ -0.39
SNX17-202ENST00000427123 RMI2Q96E14 147 aa12.62□□□□□ -0.39
SNX17-202ENST00000427123 RBM3P98179 157 aaKnown RBP12.61□□□□□ -0.39
SNX17-202ENST00000427123 LAMTOR3Q9UHA4 124 aa12.61□□□□□ -0.39
SNX17-202ENST00000427123 TLX1NBP0CAT3 122 aa12.61□□□□□ -0.39
SNX17-202ENST00000427123 UPK3BQ9BT76 320 aa12.61□□□□□ -0.39
SNX17-202ENST00000427123 LOC110117498A0A087WWA1 95 aa12.6□□□□□ -0.39
SNX17-202ENST00000427123 GHRHP01286 108 aa12.6□□□□□ -0.39
SNX17-202ENST00000427123 USP17L23D6RBM5 183 aa12.59□□□□□ -0.39
SNX17-202ENST00000427123 HUWE1Q7Z6Z7 4374 aaKnown RBP12.58□□□□□ -0.4
SNX17-202ENST00000427123 Q6ZQT0 140 aa12.58□□□□□ -0.4
SNX17-202ENST00000427123 NOTCH1P46531 2555 aa12.58□□□□□ -0.4
SNX17-202ENST00000427123 NKAPP1Q8N9T2 125 aa12.57□□□□□ -0.4
SNX17-202ENST00000427123 IGKV3D-7A0A0C4DH55 119 aa12.57□□□□□ -0.4
SNX17-202ENST00000427123 CCDC179H3BU77 68 aa12.57□□□□□ -0.4
SNX17-202ENST00000427123 LINC00528Q8N1L1 170 aa12.57□□□□□ -0.4
SNX17-202ENST00000427123 CASC10Q5T4H9 136 aa12.55□□□□□ -0.4
SNX17-202ENST00000427123 PLA2G2DQ9UNK4 145 aa12.55□□□□□ -0.4
SNX17-202ENST00000427123 SERTAD4-AS1Q5TG53 156 aa12.54□□□□□ -0.4
SNX17-202ENST00000427123 ATP5EP2Q5VTU8 51 aa12.54□□□□□ -0.4
SNX17-202ENST00000427123 DSCR8Q96T75 97 aa12.54□□□□□ -0.4
SNX17-202ENST00000427123 COL6A5A8TX70 2615 aa12.54□□□□□ -0.4
SNX17-202ENST00000427123 PDE6GP18545 87 aa12.54□□□□□ -0.4
SNX17-202ENST00000427123 HIST1H4AP62805 103 aaKnown RBP12.54□□□□□ -0.4
SNX17-202ENST00000427123 KCNQ1DNQ9H478 68 aa12.53□□□□□ -0.4
SNX17-202ENST00000427123 C7orf33Q8WU49 177 aa12.52□□□□□ -0.4
SNX17-202ENST00000427123 UBL5Q9BZL1 73 aa12.51□□□□□ -0.41
SNX17-202ENST00000427123 DNAH1Q9P2D7 4330 aa12.51□□□□□ -0.41
SNX17-202ENST00000427123 IGLV5-37A0A075B6J1 123 aa12.5□□□□□ -0.41
SNX17-202ENST00000427123 B5MCH6 92 aa12.5□□□□□ -0.41
SNX17-202ENST00000427123 NBEAL1Q6ZS30 2694 aa12.48□□□□□ -0.41
SNX17-202ENST00000427123 TRBV7-4A0A0J9YYF1 115 aa12.47□□□□□ -0.41
SNX17-202ENST00000427123 ATOX1O00244 68 aa12.47□□□□□ -0.41
SNX17-202ENST00000427123 PRYO14603 147 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms