RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 LIMD2Q9BT23 127 aa9.41□□□□□ -0.9
RPL28-202ENST00000426763 C16orf90A8MZG2 172 aa9.4□□□□□ -0.9
RPL28-202ENST00000426763 HELZ2Q9BYK8 2649 aaKnown RBP9.4□□□□□ -0.91
RPL28-202ENST00000426763 J3KT08 172 aa9.39□□□□□ -0.91
RPL28-202ENST00000426763 PCNTO95613 3336 aa9.39□□□□□ -0.91
RPL28-202ENST00000426763 IGHV6-1A0A0B4J1U7 121 aa9.39□□□□□ -0.91
RPL28-202ENST00000426763 TM2D3Q9BRN9 247 aa9.39□□□□□ -0.91
RPL28-202ENST00000426763 SERP2Q8N6R1 65 aa9.38□□□□□ -0.91
RPL28-202ENST00000426763 C3orf22Q8N5N4 141 aa9.38□□□□□ -0.91
RPL28-202ENST00000426763 TRBV7-6A0A0J9YX20 115 aa9.37□□□□□ -0.91
RPL28-202ENST00000426763 LINC00612Q8N6U2 182 aa9.37□□□□□ -0.91
RPL28-202ENST00000426763 PHF5AQ7RTV0 110 aaKnown RBP9.37□□□□□ -0.91
RPL28-202ENST00000426763 FAM229AH3BQW9 127 aa9.37□□□□□ -0.91
RPL28-202ENST00000426763 FAM30AQ9NZY2 134 aa9.36□□□□□ -0.91
RPL28-202ENST00000426763 SOSTDC1Q6X4U4 206 aa9.36□□□□□ -0.91
RPL28-202ENST00000426763 XGP55808 180 aa9.35□□□□□ -0.91
RPL28-202ENST00000426763 FAM236DA0A1B0GTK5 79 aa9.35□□□□□ -0.91
RPL28-202ENST00000426763 NDUFC1O43677 76 aa9.35□□□□□ -0.91
RPL28-202ENST00000426763 FAM236CP0DP71 79 aa9.35□□□□□ -0.91
RPL28-202ENST00000426763 KIAA0087Q14695 138 aa9.35□□□□□ -0.91
RPL28-202ENST00000426763 Q6ZRP5 223 aa9.35□□□□□ -0.91
RPL28-202ENST00000426763 FLNAP21333 2647 aaKnown RBP9.35□□□□□ -0.91
RPL28-202ENST00000426763 ELOF1P60002 83 aaKnown RBP9.33□□□□□ -0.92
RPL28-202ENST00000426763 Q8N9L7 120 aa9.33□□□□□ -0.92
RPL28-202ENST00000426763 K7ERS5 55 aa9.33□□□□□ -0.92
RPL28-202ENST00000426763 ZNF292O60281 2723 aa9.31□□□□□ -0.92
RPL28-202ENST00000426763 SNURFQ9Y675 71 aa9.31□□□□□ -0.92
RPL28-202ENST00000426763 Q6ZRX8 168 aa9.31□□□□□ -0.92
RPL28-202ENST00000426763 ITPR3Q14573 2671 aa9.31□□□□□ -0.92
RPL28-202ENST00000426763 MOBPQ13875 183 aa9.3□□□□□ -0.92
RPL28-202ENST00000426763 CHTF8P0CG12 524 aa9.3□□□□□ -0.92
RPL28-202ENST00000426763 LINC01547P58512 204 aaPredicted RBP9.3□□□□□ -0.92
RPL28-202ENST00000426763 PRR34Q9NV39 138 aa9.3□□□□□ -0.92
RPL28-202ENST00000426763 Q6ZVQ6 151 aa9.3□□□□□ -0.92
RPL28-202ENST00000426763 Q6Q795 121 aa9.29□□□□□ -0.92
RPL28-202ENST00000426763 ATP5EP56381 51 aaPredicted RBP9.29□□□□□ -0.92
RPL28-202ENST00000426763 DEFB116Q30KQ4 102 aa9.29□□□□□ -0.92
RPL28-202ENST00000426763 EPM2AB3EWF7 344 aa9.28□□□□□ -0.92
RPL28-202ENST00000426763 COX7CP15954 63 aa9.28□□□□□ -0.92
RPL28-202ENST00000426763 CRYGAP11844 174 aa9.27□□□□□ -0.93
RPL28-202ENST00000426763 BCE1O60756 84 aa9.27□□□□□ -0.93
RPL28-202ENST00000426763 MKI67P46013 3256 aaKnown RBP9.27□□□□□ -0.93
RPL28-202ENST00000426763 TRAV7A0A075B6U4 112 aa9.27□□□□□ -0.93
RPL28-202ENST00000426763 LAMA3Q16787 3333 aa9.26□□□□□ -0.93
RPL28-202ENST00000426763 CFAP46Q8IYW2 2715 aa9.26□□□□□ -0.93
RPL28-202ENST00000426763 A0A087WVE0 104 aa9.26□□□□□ -0.93
RPL28-202ENST00000426763 VPREB1P12018 145 aa9.25□□□□□ -0.93
RPL28-202ENST00000426763 LINC00846Q9NV44 126 aa9.25□□□□□ -0.93
RPL28-202ENST00000426763 LINC00208Q96KT6 92 aa9.25□□□□□ -0.93
RPL28-202ENST00000426763 MGAM2Q2M2H8 2515 aa9.24□□□□□ -0.93
RPL28-202ENST00000426763 Q8NBF4 154 aa9.24□□□□□ -0.93
RPL28-202ENST00000426763 SPACA4Q8TDM5 124 aa9.24□□□□□ -0.93
RPL28-202ENST00000426763 FAM218AQ96MZ4 157 aa9.24□□□□□ -0.93
RPL28-202ENST00000426763 PLA2G1BP04054 148 aaKnown RBP9.23□□□□□ -0.93
RPL28-202ENST00000426763 SPTSSBQ8NFR3 76 aa9.23□□□□□ -0.93
RPL28-202ENST00000426763 PRR4Q16378 134 aa9.23□□□□□ -0.93
RPL28-202ENST00000426763 LITAFQ99732 161 aa9.23□□□□□ -0.93
RPL28-202ENST00000426763 HCG22E2RYF7 251 aa9.23□□□□□ -0.93
RPL28-202ENST00000426763 PRR15LQ9BU68 103 aa9.23□□□□□ -0.93
RPL28-202ENST00000426763 APLNQ9ULZ1 77 aa9.23□□□□□ -0.93
RPL28-202ENST00000426763 C15orf56Q8N910 161 aa9.22□□□□□ -0.93
RPL28-202ENST00000426763 RETNLBQ9BQ08 111 aa9.22□□□□□ -0.93
RPL28-202ENST00000426763 A0A1B0GW54 56 aa9.22□□□□□ -0.93
RPL28-202ENST00000426763 FAM168BA1KXE4 195 aa9.22□□□□□ -0.93
RPL28-202ENST00000426763 TYMSOSQ8TAI1 123 aa9.21□□□□□ -0.93
RPL28-202ENST00000426763 IGLV6-57P01721 117 aa9.21□□□□□ -0.94
RPL28-202ENST00000426763 CXCL6P80162 114 aa9.21□□□□□ -0.94
RPL28-202ENST00000426763 A0A087WTM6 91 aa9.2□□□□□ -0.94
RPL28-202ENST00000426763 RPL37AP61513 92 aaKnown RBP9.2□□□□□ -0.94
RPL28-202ENST00000426763 LINC00476Q8WZB0 136 aa9.2□□□□□ -0.94
RPL28-202ENST00000426763 SERTAD4-AS1Q5TG53 156 aa9.2□□□□□ -0.94
RPL28-202ENST00000426763 USP24Q9UPU5 2620 aa9.2□□□□□ -0.94
RPL28-202ENST00000426763 ST20-AS1Q8NBB2 130 aa9.19□□□□□ -0.94
RPL28-202ENST00000426763 MPLKIPQ8TAP9 179 aa9.19□□□□□ -0.94
RPL28-202ENST00000426763 SERP1Q9Y6X1 66 aa9.19□□□□□ -0.94
RPL28-202ENST00000426763 V9GYY9 64 aa9.18□□□□□ -0.94
RPL28-202ENST00000426763 IGLV1-50A0A075B6I6 118 aa9.18□□□□□ -0.94
RPL28-202ENST00000426763 WIPF1O43516 503 aa9.17□□□□□ -0.94
RPL28-202ENST00000426763 H0Y9P7 68 aa9.17□□□□□ -0.94
RPL28-202ENST00000426763 CR1P17927 2039 aa9.16□□□□□ -0.94
RPL28-202ENST00000426763 KCNQ1DNQ9H478 68 aa9.16□□□□□ -0.94
RPL28-202ENST00000426763 CCDC179H3BU77 68 aa9.15□□□□□ -0.94
RPL28-202ENST00000426763 C9orf163Q8N9P6 203 aa9.15□□□□□ -0.94
RPL28-202ENST00000426763 LINC00336Q6ZUF6 198 aa9.15□□□□□ -0.94
RPL28-202ENST00000426763 ATRQ13535 2644 aa9.14□□□□□ -0.95
RPL28-202ENST00000426763 LOC110117498A0A087WWA1 95 aa9.14□□□□□ -0.95
RPL28-202ENST00000426763 TLX1NBP0CAT3 122 aa9.13□□□□□ -0.95
RPL28-202ENST00000426763 Q6ZQT0 140 aa9.13□□□□□ -0.95
RPL28-202ENST00000426763 PCOTHQ58A44 107 aa9.13□□□□□ -0.95
RPL28-202ENST00000426763 SMCPP49901 116 aaPredicted RBP9.13□□□□□ -0.95
RPL28-202ENST00000426763 CENPEQ02224 2701 aa9.12□□□□□ -0.95
RPL28-202ENST00000426763 BRCA2P51587 3418 aa9.12□□□□□ -0.95
RPL28-202ENST00000426763 MAST4O15021 2626 aa9.11□□□□□ -0.95
RPL28-202ENST00000426763 C9orf129Q5T035 196 aaKnown RBP9.1□□□□□ -0.95
RPL28-202ENST00000426763 ZNF575Q86XF7 245 aa9.1□□□□□ -0.95
RPL28-202ENST00000426763 MGAQ8IWI9 3026 aa9.1□□□□□ -0.95
RPL28-202ENST00000426763 hDV103S1A0JD37 113 aa9.09□□□□□ -0.95
RPL28-202ENST00000426763 PRO0461Q9UI25 63 aa9.09□□□□□ -0.95
RPL28-202ENST00000426763 PLA2G2DQ9UNK4 145 aa9.09□□□□□ -0.95
RPL28-202ENST00000426763 BPTFQ12830 3046 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms