RNA–Protein interactions for RNA: ENST00000426471.6

LINC00993-202, long intergenic non-protein coding RNA 993, humanhuman

TSL 2

Gene LINC00993, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-202ENST00000426471 CKS2P33552 79 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 IFI27P40305 119 aaPredicted RBP1.05□□□□□ -2.24
LINC00993-202ENST00000426471 FOXA3P55318 350 aaPredicted RBP1.05□□□□□ -2.24
LINC00993-202ENST00000426471 KRTAP10-4P60372 401 aaPredicted RBP1.05□□□□□ -2.24
LINC00993-202ENST00000426471 CKS1BP61024 79 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 UBE2BP63146 152 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 SEC11AP67812 179 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 HBBP68871 147 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 RPL18AQ02543 176 aaKnown RBP1.05□□□□□ -2.24
LINC00993-202ENST00000426471 SPAG11BQ08648 103 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 C9orf116Q5BN46 136 aaPredicted RBP1.05□□□□□ -2.24
LINC00993-202ENST00000426471 C1orf137Q5JT78 98 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 KRTAP26-1Q6PEX3 210 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 FAM231DQ6ZW35 169 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 MRPL52Q86TS9 123 aaKnown RBP1.05□□□□□ -2.24
LINC00993-202ENST00000426471 OR10D4PQ8NGN7 298 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 RPL39LQ96EH5 51 aaKnown RBP1.05□□□□□ -2.24
LINC00993-202ENST00000426471 SMIM7Q9BQ49 75 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 C20orf78Q9BR46 151 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 C2orf88Q9BSF0 95 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 TMEM191AQ9H0A3 160 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 RNASE7Q9H1E1 156 aaKnown RBP1.05□□□□□ -2.24
LINC00993-202ENST00000426471 CDC42SE2Q9NRR3 84 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 SPANXA1Q9NS26 97 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 TMEM242Q9NWH2 141 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 NAT8BQ9UHF3 227 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 KMT2AQ03164 3969 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 ABCA13Q86UQ4 5058 aa1.05□□□□□ -2.24
LINC00993-202ENST00000426471 PLECQ15149 4684 aaKnown RBP1.05□□□□□ -2.24
LINC00993-202ENST00000426471 DMBT1Q9UGM3 2413 aaPredicted RBP1.05□□□□□ -2.24
LINC00993-202ENST00000426471 A0A096LNI7 61 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 TRBV30A0A0K0K1B3 111 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 LINC01549A6NIU2 74 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 HIGD1CA8MV81 97 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 K7EMI3 77 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 NUPR1O60356 82 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 MT1HL1P0DM35 61 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 RAB4AP20338 218 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 RPL28P46779 137 aaKnown RBP1.04□□□□□ -2.24
LINC00993-202ENST00000426471 POLR2KP53803 58 aaKnown RBP1.04□□□□□ -2.24
LINC00993-202ENST00000426471 PEA15Q15121 130 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 MRPL55Q7Z7F7 128 aaKnown RBP1.04□□□□□ -2.24
LINC00993-202ENST00000426471 C5orf38Q86SI9 138 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 AKAP14Q86UN6 197 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 TCTE3Q8IZS6 198 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 ORMDL3Q8N138 153 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 NUP35Q8NFH5 326 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 ORAOV1Q8WV07 137 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 TIMM21Q9BVV7 248 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 SMDT1Q9H4I9 107 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 OSTCQ9NRP0 149 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 MRPL35Q9NZE8 188 aaKnown RBP1.04□□□□□ -2.24
LINC00993-202ENST00000426471 NAT8Q9UHE5 227 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 LAMTOR2Q9Y2Q5 125 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 R4GN34 69 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 VPS13DQ5THJ4 4388 aa1.04□□□□□ -2.24
LINC00993-202ENST00000426471 MUC4Q99102 2169 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 DYNC1H1Q14204 4646 aaKnown RBP1.03□□□□□ -2.24
LINC00993-202ENST00000426471 TRBV24-1A0A075B6N3 115 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.03□□□□□ -2.24
LINC00993-202ENST00000426471 K7EN84 100 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 M0QXV9 152 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 MT-ND4LP03901 98 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 CRYGAP11844 174 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 RAB14P61106 215 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 HERVK_113P63121 156 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 S100A12P80511 92 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 MRPS36P82909 103 aaKnown RBP1.03□□□□□ -2.24
LINC00993-202ENST00000426471 ADIRFQ15847 76 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 FAM104BQ5XKR9 115 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 ALKAL2Q6UX46 152 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 ATP5L2Q7Z4Y8 100 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 FAM19A5Q7Z5A7 132 aaPredicted RBP1.03□□□□□ -2.24
LINC00993-202ENST00000426471 AMN1Q8IY45 258 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 LINC00526Q96FQ7 95 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 TMEM141Q96I45 108 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 PRELID3AQ96N28 172 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 SMIM2Q9BVW6 85 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 MAP1LC3AQ9H492 121 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 TOMM7Q9P0U1 55 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 CYSLTR1Q9Y271 337 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 UBE2D4Q9Y2X8 147 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 HECTD4Q9Y4D8 3996 aa1.03□□□□□ -2.24
LINC00993-202ENST00000426471 HSPG2P98160 4391 aa1.02□□□□□ -2.25
LINC00993-202ENST00000426471 IGKV2D-26A0A0A0MRZ7 120 aa1.02□□□□□ -2.25
LINC00993-202ENST00000426471 IGHV3OR16-9A0A0B4J2B5 98 aa1.02□□□□□ -2.25
LINC00993-202ENST00000426471 LOC389332A0A1B0GUA5 103 aa1.02□□□□□ -2.25
LINC00993-202ENST00000426471 A0A1B0GVG6 124 aa1.02□□□□□ -2.25
LINC00993-202ENST00000426471 SMIM27A0A1W2PRY6 76 aa1.02□□□□□ -2.25
LINC00993-202ENST00000426471 D6R8Y8 96 aa1.02□□□□□ -2.25
LINC00993-202ENST00000426471 F8VRH5 84 aa1.02□□□□□ -2.25
LINC00993-202ENST00000426471 H3BRM9 83 aa1.02□□□□□ -2.25
LINC00993-202ENST00000426471 SRP19P09132 144 aaKnown RBP1.02□□□□□ -2.25
LINC00993-202ENST00000426471 S100PP25815 95 aa1.02□□□□□ -2.25
LINC00993-202ENST00000426471 CTAG1AP78358 180 aa1.02□□□□□ -2.25
LINC00993-202ENST00000426471 MRPL51Q4U2R6 128 aaKnown RBP1.02□□□□□ -2.25
LINC00993-202ENST00000426471 MRPL54Q6P161 138 aaKnown RBP1.02□□□□□ -2.25
LINC00993-202ENST00000426471 SFTA2Q6UW10 78 aa1.02□□□□□ -2.25
LINC00993-202ENST00000426471 UNQ6190/PRO20217Q6UXQ8 127 aa1.02□□□□□ -2.25
LINC00993-202ENST00000426471 Q6ZUT4 128 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms