RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 IGKV2D-24A0A075B6R9 120 aa9.19□□□□□ -0.94
USP42-203ENST00000426246 TMEM126AQ9H061 195 aa9.19□□□□□ -0.94
USP42-203ENST00000426246 X6R8D5 127 aa9.18□□□□□ -0.94
USP42-203ENST00000426246 KRTAP24-1Q3LI83 254 aa9.17□□□□□ -0.94
USP42-203ENST00000426246 CAMK2N2Q96S95 79 aa9.17□□□□□ -0.94
USP42-203ENST00000426246 OVOL2Q9BRP0 275 aa9.16□□□□□ -0.94
USP42-203ENST00000426246 PPDPFQ9H3Y8 114 aa9.16□□□□□ -0.94
USP42-203ENST00000426246 WIPF1O43516 503 aa9.16□□□□□ -0.94
USP42-203ENST00000426246 DSCR8Q96T75 97 aa9.15□□□□□ -0.94
USP42-203ENST00000426246 UBL5Q9BZL1 73 aa9.15□□□□□ -0.94
USP42-203ENST00000426246 FAM240AA0A1B0GVK7 77 aa9.15□□□□□ -0.94
USP42-203ENST00000426246 SPART-AS1P0CW21 52 aa9.15□□□□□ -0.94
USP42-203ENST00000426246 CD164L2Q6UWJ8 174 aa9.15□□□□□ -0.94
USP42-203ENST00000426246 C20orf197Q8N268 126 aa9.15□□□□□ -0.94
USP42-203ENST00000426246 C9orf66Q5T8R8 295 aa9.14□□□□□ -0.95
USP42-203ENST00000426246 USP17L23D6RBM5 183 aa9.14□□□□□ -0.95
USP42-203ENST00000426246 C3orf22Q8N5N4 141 aa9.14□□□□□ -0.95
USP42-203ENST00000426246 GHRHP01286 108 aa9.14□□□□□ -0.95
USP42-203ENST00000426246 WFDC10BQ8IUB3 73 aa9.14□□□□□ -0.95
USP42-203ENST00000426246 Q8N814 137 aa9.14□□□□□ -0.95
USP42-203ENST00000426246 Q8NDZ9 215 aa9.14□□□□□ -0.95
USP42-203ENST00000426246 C22orf24Q9Y442 160 aa9.14□□□□□ -0.95
USP42-203ENST00000426246 TRBV10-3A0A0K0K1G6 114 aa9.13□□□□□ -0.95
USP42-203ENST00000426246 M0QXV9 152 aa9.13□□□□□ -0.95
USP42-203ENST00000426246 M0R2N4 97 aa9.13□□□□□ -0.95
USP42-203ENST00000426246 IGHV4-30-4P0DP06 118 aa9.13□□□□□ -0.95
USP42-203ENST00000426246 APOC4P55056 127 aa9.13□□□□□ -0.95
USP42-203ENST00000426246 Q6Q795 121 aa9.12□□□□□ -0.95
USP42-203ENST00000426246 Q8IZM0 81 aa9.12□□□□□ -0.95
USP42-203ENST00000426246 RBM3P98179 157 aaKnown RBP9.12□□□□□ -0.95
USP42-203ENST00000426246 DEFB121Q5J5C9 76 aa9.12□□□□□ -0.95
USP42-203ENST00000426246 TENM2Q9NT68 2774 aa9.12□□□□□ -0.95
USP42-203ENST00000426246 KIR2DL5BQ8NHK3 375 aa9.12□□□□□ -0.95
USP42-203ENST00000426246 Q8N9L7 120 aa9.11□□□□□ -0.95
USP42-203ENST00000426246 SNURFQ9Y675 71 aa9.11□□□□□ -0.95
USP42-203ENST00000426246 TRBV7-7A0A0K0K1E9 115 aa9.11□□□□□ -0.95
USP42-203ENST00000426246 CYSTM1Q9H1C7 97 aa9.11□□□□□ -0.95
USP42-203ENST00000426246 UQCRQO14949 82 aa9.1□□□□□ -0.95
USP42-203ENST00000426246 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.1□□□□□ -0.95
USP42-203ENST00000426246 UPK3BQ9BT76 320 aa9.1□□□□□ -0.95
USP42-203ENST00000426246 STAB2Q8WWQ8 2551 aa9.09□□□□□ -0.95
USP42-203ENST00000426246 C3orf84H3BNL1 204 aa9.09□□□□□ -0.95
USP42-203ENST00000426246 TMEM256-PLSCR3K7ERE1 68 aa9.09□□□□□ -0.95
USP42-203ENST00000426246 RPL37AP8A6NKH3 93 aa9.09□□□□□ -0.95
USP42-203ENST00000426246 Q6ZTC4 211 aa9.09□□□□□ -0.95
USP42-203ENST00000426246 ATOX1O00244 68 aa9.09□□□□□ -0.96
USP42-203ENST00000426246 COX7CP15954 63 aa9.07□□□□□ -0.96
USP42-203ENST00000426246 NANOS2P60321 138 aaKnown RBP9.07□□□□□ -0.96
USP42-203ENST00000426246 KPRPQ5T749 579 aaPredicted RBP9.07□□□□□ -0.96
USP42-203ENST00000426246 LINC01561Q8N1V8 128 aa9.05□□□□□ -0.96
USP42-203ENST00000426246 KIAA0087Q14695 138 aa9.05□□□□□ -0.96
USP42-203ENST00000426246 C1orf43Q9BWL3 253 aa9.05□□□□□ -0.96
USP42-203ENST00000426246 LYRM9A8MSI8 78 aa9.05□□□□□ -0.96
USP42-203ENST00000426246 CCKP06307 115 aa9.05□□□□□ -0.96
USP42-203ENST00000426246 DIRC1Q969H9 104 aa9.04□□□□□ -0.96
USP42-203ENST00000426246 A0A1B0GUV1 79 aa9.04□□□□□ -0.96
USP42-203ENST00000426246 JMJD7-PLA2G4BH0Y9G9 81 aa9.04□□□□□ -0.96
USP42-203ENST00000426246 KRTAP10-11P60412 298 aa9.03□□□□□ -0.96
USP42-203ENST00000426246 LINC00612Q8N6U2 182 aa9.03□□□□□ -0.96
USP42-203ENST00000426246 CSMD3Q7Z407 3707 aa9.03□□□□□ -0.96
USP42-203ENST00000426246 NKAPP1Q8N9T2 125 aa9.02□□□□□ -0.97
USP42-203ENST00000426246 IMUPQ9GZP8 106 aa9.02□□□□□ -0.97
USP42-203ENST00000426246 C6orf48Q9UBA6 75 aa9.02□□□□□ -0.97
USP42-203ENST00000426246 Q6ZRU5 148 aa9.02□□□□□ -0.97
USP42-203ENST00000426246 EGFEM1PQ0D2K5 195 aa9.01□□□□□ -0.97
USP42-203ENST00000426246 LYPD5Q6UWN5 251 aa9.01□□□□□ -0.97
USP42-203ENST00000426246 COX7BP24311 80 aa9□□□□□ -0.97
USP42-203ENST00000426246 LINC00575Q6W349 94 aa9□□□□□ -0.97
USP42-203ENST00000426246 A0A0J9YWU9 116 aa9□□□□□ -0.97
USP42-203ENST00000426246 ZNF73O43830 326 aaPredicted RBP9□□□□□ -0.97
USP42-203ENST00000426246 LELP1Q5T871 98 aa9□□□□□ -0.97
USP42-203ENST00000426246 FAM19A3Q7Z5A8 133 aa9□□□□□ -0.97
USP42-203ENST00000426246 DPH3Q96FX2 82 aa9□□□□□ -0.97
USP42-203ENST00000426246 IGKV2-24A0A0C4DH68 120 aa9□□□□□ -0.97
USP42-203ENST00000426246 SMIM9A6NGZ8 99 aa9□□□□□ -0.97
USP42-203ENST00000426246 SERP2Q8N6R1 65 aa9□□□□□ -0.97
USP42-203ENST00000426246 A0A096LNI7 61 aa8.98□□□□□ -0.97
USP42-203ENST00000426246 Q6JHZ5 121 aa8.98□□□□□ -0.97
USP42-203ENST00000426246 Q8NAQ8 132 aa8.98□□□□□ -0.97
USP42-203ENST00000426246 DEFB131BA0A096LNP1 70 aa8.98□□□□□ -0.97
USP42-203ENST00000426246 A0A0G2JQZ4 141 aa8.97□□□□□ -0.97
USP42-203ENST00000426246 A0A1W2PNN7 141 aa8.97□□□□□ -0.97
USP42-203ENST00000426246 TRAV10A0A0B4J240 114 aa8.97□□□□□ -0.97
USP42-203ENST00000426246 MIFP14174 115 aa8.97□□□□□ -0.97
USP42-203ENST00000426246 FAM19A5Q7Z5A7 132 aaPredicted RBP8.97□□□□□ -0.97
USP42-203ENST00000426246 SRRM2Q9UQ35 2752 aaKnown RBP8.96□□□□□ -0.98
USP42-203ENST00000426246 Q6ZVQ6 151 aa8.95□□□□□ -0.98
USP42-203ENST00000426246 ESRGQ1W209 222 aa8.95□□□□□ -0.98
USP42-203ENST00000426246 DEFB116Q30KQ4 102 aa8.95□□□□□ -0.98
USP42-203ENST00000426246 RMI2Q96E14 147 aa8.95□□□□□ -0.98
USP42-203ENST00000426246 J3KT08 172 aa8.94□□□□□ -0.98
USP42-203ENST00000426246 UBE2BP63146 152 aa8.94□□□□□ -0.98
USP42-203ENST00000426246 HRCT1Q6UXD1 115 aa8.94□□□□□ -0.98
USP42-203ENST00000426246 LINC01547P58512 204 aaPredicted RBP8.94□□□□□ -0.98
USP42-203ENST00000426246 HUWE1Q7Z6Z7 4374 aaKnown RBP8.93□□□□□ -0.98
USP42-203ENST00000426246 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.93□□□□□ -0.98
USP42-203ENST00000426246 C11orf45Q8TAV5 145 aa8.93□□□□□ -0.98
USP42-203ENST00000426246 COX17Q14061 63 aa8.93□□□□□ -0.98
USP42-203ENST00000426246 FAM168BA1KXE4 195 aa8.92□□□□□ -0.98
USP42-203ENST00000426246 PRR4Q16378 134 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 715.2 ms