RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 PHF5AQ7RTV0 110 aaKnown RBP11.67□□□□□ -0.54
MCF2L-214ENST00000423251 PLA2G2DQ9UNK4 145 aa11.67□□□□□ -0.54
MCF2L-214ENST00000423251 LINC00158P58513 81 aa11.66□□□□□ -0.54
MCF2L-214ENST00000423251 SND1-IT1Q9HBX3 110 aa11.66□□□□□ -0.54
MCF2L-214ENST00000423251 SERTAD4-AS1Q5TG53 156 aa11.65□□□□□ -0.54
MCF2L-214ENST00000423251 FAT3Q8TDW7 4589 aa11.65□□□□□ -0.54
MCF2L-214ENST00000423251 M0QXV9 152 aa11.64□□□□□ -0.55
MCF2L-214ENST00000423251 MEIG1Q5JSS6 88 aa11.64□□□□□ -0.55
MCF2L-214ENST00000423251 C22orf24Q9Y442 160 aa11.64□□□□□ -0.55
MCF2L-214ENST00000423251 SMIM13P0DJ93 91 aa11.63□□□□□ -0.55
MCF2L-214ENST00000423251 TP73-AS1Q9UF72 201 aa11.63□□□□□ -0.55
MCF2L-214ENST00000423251 HMCN2Q8NDA2 5059 aa11.63□□□□□ -0.55
MCF2L-214ENST00000423251 PRR3P79522 188 aaKnown RBP11.62□□□□□ -0.55
MCF2L-214ENST00000423251 LBHQ53QV2 105 aaPredicted RBP11.62□□□□□ -0.55
MCF2L-214ENST00000423251 IGLV5-37A0A075B6J1 123 aa11.61□□□□□ -0.55
MCF2L-214ENST00000423251 A0A0U1RRA0 63 aa11.61□□□□□ -0.55
MCF2L-214ENST00000423251 LOC105371267A0A1B0GV96 52 aa11.61□□□□□ -0.55
MCF2L-214ENST00000423251 SCGB1D1O95968 90 aa11.61□□□□□ -0.55
MCF2L-214ENST00000423251 JOSD1Q15040 202 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-214ENST00000423251 RPL24P83731 157 aaKnown RBP11.59□□□□□ -0.55
MCF2L-214ENST00000423251 MIR7-3HGQ8N6C7 128 aa11.59□□□□□ -0.55
MCF2L-214ENST00000423251 PSORS1C2Q9UIG4 136 aa11.59□□□□□ -0.55
MCF2L-214ENST00000423251 IGKV2D-26A0A0A0MRZ7 120 aa11.58□□□□□ -0.56
MCF2L-214ENST00000423251 UBE2BP63146 152 aa11.58□□□□□ -0.56
MCF2L-214ENST00000423251 MRPL55Q7Z7F7 128 aaKnown RBP11.58□□□□□ -0.56
MCF2L-214ENST00000423251 ATOH7Q8N100 152 aa11.58□□□□□ -0.56
MCF2L-214ENST00000423251 PKHD1L1Q86WI1 4243 aa11.58□□□□□ -0.56
MCF2L-214ENST00000423251 A0A0J9YXY3 114 aa11.57□□□□□ -0.56
MCF2L-214ENST00000423251 KRTAP11-1Q8IUC1 163 aa11.57□□□□□ -0.56
MCF2L-214ENST00000423251 NKAPP1Q8N9T2 125 aa11.57□□□□□ -0.56
MCF2L-214ENST00000423251 SMIM6P0DI80 62 aa11.56□□□□□ -0.56
MCF2L-214ENST00000423251 VPREB1P12018 145 aa11.56□□□□□ -0.56
MCF2L-214ENST00000423251 HNRNPA3P51991 378 aaKnown RBP11.55□□□□□ -0.56
MCF2L-214ENST00000423251 ANKRD39Q53RE8 183 aa11.55□□□□□ -0.56
MCF2L-214ENST00000423251 LINC00167Q96N53 147 aa11.55□□□□□ -0.56
MCF2L-214ENST00000423251 LOC107984156A0A0G2JMH3 177 aa11.54□□□□□ -0.56
MCF2L-214ENST00000423251 ZNF815PA8K554 130 aa11.54□□□□□ -0.56
MCF2L-214ENST00000423251 HSBP1L1C9JCN9 74 aa11.54□□□□□ -0.56
MCF2L-214ENST00000423251 ARL17AQ8IVW1 177 aa11.54□□□□□ -0.56
MCF2L-214ENST00000423251 C1orf137Q5JT78 98 aa11.53□□□□□ -0.56
MCF2L-214ENST00000423251 TIMM17BO60830 172 aa11.52□□□□□ -0.57
MCF2L-214ENST00000423251 SRSF9Q13242 221 aaKnown RBP eCLIP11.52□□□□□ -0.57
MCF2L-214ENST00000423251 PYY3Q5JQD4 70 aa11.52□□□□□ -0.57
MCF2L-214ENST00000423251 BOD1L2Q8IYS8 172 aa11.52□□□□□ -0.57
MCF2L-214ENST00000423251 Q8NDZ9 215 aa11.52□□□□□ -0.57
MCF2L-214ENST00000423251 OXTP01178 125 aa11.51□□□□□ -0.57
MCF2L-214ENST00000423251 S100A12P80511 92 aa11.51□□□□□ -0.57
MCF2L-214ENST00000423251 DAND5Q8N907 189 aa11.51□□□□□ -0.57
MCF2L-214ENST00000423251 TTTY13Q9BZ97 58 aa11.51□□□□□ -0.57
MCF2L-214ENST00000423251 GAGE10A6NGK3 116 aa11.5□□□□□ -0.57
MCF2L-214ENST00000423251 RPL37AP8A6NKH3 93 aa11.5□□□□□ -0.57
MCF2L-214ENST00000423251 ADAMTSL4-AS1Q5T5F5 129 aa11.5□□□□□ -0.57
MCF2L-214ENST00000423251 SPINK6Q6UWN8 80 aa11.5□□□□□ -0.57
MCF2L-214ENST00000423251 UBR4Q5T4S7 5183 aa11.5□□□□□ -0.57
MCF2L-214ENST00000423251 IGLV7-43P04211 117 aa11.49□□□□□ -0.57
MCF2L-214ENST00000423251 VAMP8Q9BV40 100 aa11.49□□□□□ -0.57
MCF2L-214ENST00000423251 M0R378 163 aa11.48□□□□□ -0.57
MCF2L-214ENST00000423251 LITAFQ99732 161 aa11.48□□□□□ -0.57
MCF2L-214ENST00000423251 IGLV1-50A0A075B6I6 118 aa11.47□□□□□ -0.57
MCF2L-214ENST00000423251 MIEN1Q9BRT3 115 aa11.47□□□□□ -0.57
MCF2L-214ENST00000423251 PCP2Q8IVA1 136 aa11.46□□□□□ -0.57
MCF2L-214ENST00000423251 SCGB1D4Q6XE38 83 aa11.45□□□□□ -0.58
MCF2L-214ENST00000423251 NDUFC2O95298 119 aa11.44□□□□□ -0.58
MCF2L-214ENST00000423251 IGKV2-28A0A075B6P5 120 aa11.43□□□□□ -0.58
MCF2L-214ENST00000423251 BCE1O60756 84 aa11.43□□□□□ -0.58
MCF2L-214ENST00000423251 IGKV2D-28P01615 120 aa11.43□□□□□ -0.58
MCF2L-214ENST00000423251 SOSTDC1Q6X4U4 206 aa11.43□□□□□ -0.58
MCF2L-214ENST00000423251 TRBV10-2A0A0K0K1G8 114 aa11.42□□□□□ -0.58
MCF2L-214ENST00000423251 TMEM238C9JI98 176 aa11.42□□□□□ -0.58
MCF2L-214ENST00000423251 LINC00308Q8TCZ7 52 aa11.42□□□□□ -0.58
MCF2L-214ENST00000423251 NCR3O14931 201 aa11.41□□□□□ -0.58
MCF2L-214ENST00000423251 EIF4EBP3O60516 100 aaPredicted RBP11.41□□□□□ -0.58
MCF2L-214ENST00000423251 C12orf57Q99622 126 aa11.41□□□□□ -0.58
MCF2L-214ENST00000423251 SPANXDQ9BXN6 97 aa11.41□□□□□ -0.58
MCF2L-214ENST00000423251 SPANXCQ9NY87 97 aa11.41□□□□□ -0.58
MCF2L-214ENST00000423251 PAM16Q9Y3D7 125 aa11.41□□□□□ -0.58
MCF2L-214ENST00000423251 ZNF861PO60384 105 aa11.4□□□□□ -0.58
MCF2L-214ENST00000423251 NPC2P61916 151 aa11.4□□□□□ -0.58
MCF2L-214ENST00000423251 SPATA45Q537H7 98 aa11.4□□□□□ -0.58
MCF2L-214ENST00000423251 Q6ZVH6 145 aa11.4□□□□□ -0.58
MCF2L-214ENST00000423251 DIRC1Q969H9 104 aa11.4□□□□□ -0.58
MCF2L-214ENST00000423251 SPANXB1Q9NS25 103 aaPredicted RBP11.4□□□□□ -0.58
MCF2L-214ENST00000423251 REG3GQ6UW15 175 aa11.39□□□□□ -0.59
MCF2L-214ENST00000423251 TMEM126AQ9H061 195 aa11.39□□□□□ -0.59
MCF2L-214ENST00000423251 IFITM1P13164 125 aa11.37□□□□□ -0.59
MCF2L-214ENST00000423251 RPL28P46779 137 aaKnown RBP11.37□□□□□ -0.59
MCF2L-214ENST00000423251 LINC00518Q8N0U6 118 aa11.37□□□□□ -0.59
MCF2L-214ENST00000423251 COPS9Q8WXC6 57 aa11.37□□□□□ -0.59
MCF2L-214ENST00000423251 PPDPFQ9H3Y8 114 aa11.37□□□□□ -0.59
MCF2L-214ENST00000423251 KCNQ1DNQ9H478 68 aa11.37□□□□□ -0.59
MCF2L-214ENST00000423251 H0Y9J4 135 aa11.36□□□□□ -0.59
MCF2L-214ENST00000423251 TRBV10-3A0A0K0K1G6 114 aa11.35□□□□□ -0.59
MCF2L-214ENST00000423251 PRYO14603 147 aa11.35□□□□□ -0.59
MCF2L-214ENST00000423251 COX8AP10176 69 aa11.35□□□□□ -0.59
MCF2L-214ENST00000423251 MT1HL1P0DM35 61 aa11.34□□□□□ -0.59
MCF2L-214ENST00000423251 DDTP30046 118 aa11.34□□□□□ -0.59
MCF2L-214ENST00000423251 UBE2AP49459 152 aa11.34□□□□□ -0.59
MCF2L-214ENST00000423251 KRTAP13-1Q8IUC0 172 aa11.34□□□□□ -0.59
MCF2L-214ENST00000423251 S100A7L2Q5SY68 101 aa11.33□□□□□ -0.6
MCF2L-214ENST00000423251 FAM19A1Q7Z5A9 133 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms