RNA–Protein interactions for RNA: ENST00000422806.1

NKX1-1-201, Transcript of NK1 homeobox 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX1-1, Length 1,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1-201ENST00000422806 A0A0U1RRA0 63 aa17.21■□□□□ 0.35
NKX1-1-201ENST00000422806 ATP6V1G1O75348 118 aa17.21■□□□□ 0.35
NKX1-1-201ENST00000422806 COLCA2A8K830 154 aa17.19■□□□□ 0.34
NKX1-1-201ENST00000422806 LINC00310P59036 64 aa17.18■□□□□ 0.34
NKX1-1-201ENST00000422806 HSPB8Q9UJY1 196 aa17.18■□□□□ 0.34
NKX1-1-201ENST00000422806 MEIG1Q5JSS6 88 aa17.17■□□□□ 0.34
NKX1-1-201ENST00000422806 FABP4P15090 132 aa17.16■□□□□ 0.34
NKX1-1-201ENST00000422806 SMIM13P0DJ93 91 aa17.15■□□□□ 0.34
NKX1-1-201ENST00000422806 HERV-K104P63124 156 aa17.15■□□□□ 0.34
NKX1-1-201ENST00000422806 NDUFA12Q9UI09 145 aa17.14■□□□□ 0.33
NKX1-1-201ENST00000422806 Q8NDZ9 215 aa17.13■□□□□ 0.33
NKX1-1-201ENST00000422806 MYMXA0A1B0GTQ4 84 aa17.12■□□□□ 0.33
NKX1-1-201ENST00000422806 LINC00587B1AMM8 73 aa17.12■□□□□ 0.33
NKX1-1-201ENST00000422806 TMEM238C9JI98 176 aa17.12■□□□□ 0.33
NKX1-1-201ENST00000422806 PLNP26678 52 aa17.12■□□□□ 0.33
NKX1-1-201ENST00000422806 FAM19A1Q7Z5A9 133 aa17.12■□□□□ 0.33
NKX1-1-201ENST00000422806 KRTAP13-1Q8IUC0 172 aa17.12■□□□□ 0.33
NKX1-1-201ENST00000422806 TMEM126AQ9H061 195 aa17.12■□□□□ 0.33
NKX1-1-201ENST00000422806 CRYGAP11844 174 aa17.1■□□□□ 0.33
NKX1-1-201ENST00000422806 DPM2O94777 84 aa17.08■□□□□ 0.32
NKX1-1-201ENST00000422806 PRLHP81277 87 aa17.08■□□□□ 0.32
NKX1-1-201ENST00000422806 MIR7-3HGQ8N6C7 128 aa17.08■□□□□ 0.32
NKX1-1-201ENST00000422806 M0R378 163 aa17.07■□□□□ 0.32
NKX1-1-201ENST00000422806 LEPROTO15243 131 aa17.07■□□□□ 0.32
NKX1-1-201ENST00000422806 BOD1L2Q8IYS8 172 aa17.07■□□□□ 0.32
NKX1-1-201ENST00000422806 PLEKHB2Q96CS7 222 aa17.07■□□□□ 0.32
NKX1-1-201ENST00000422806 MAP1LC3CQ9BXW4 147 aa17.07■□□□□ 0.32
NKX1-1-201ENST00000422806 LPAP08519 4548 aa17.07■□□□□ 0.32
NKX1-1-201ENST00000422806 A0A087X002 238 aa17.06■□□□□ 0.32
NKX1-1-201ENST00000422806 HERVK_113P61574 105 aa17.06■□□□□ 0.32
NKX1-1-201ENST00000422806 PMCHL2Q9BQD1 86 aa17.06■□□□□ 0.32
NKX1-1-201ENST00000422806 TYMSOSQ8TAI1 123 aa17.05■□□□□ 0.32
NKX1-1-201ENST00000422806 ANAPC11Q9NYG5 84 aa17.05■□□□□ 0.32
NKX1-1-201ENST00000422806 IGKCP01834 107 aa17.03■□□□□ 0.32
NKX1-1-201ENST00000422806 TSPEAR-AS2P59090 65 aa17.02■□□□□ 0.32
NKX1-1-201ENST00000422806 J3QQQ9 107 aa17.01■□□□□ 0.31
NKX1-1-201ENST00000422806 NCR3O14931 201 aa16.99■□□□□ 0.31
NKX1-1-201ENST00000422806 TSPAN13O95857 204 aa16.99■□□□□ 0.31
NKX1-1-201ENST00000422806 LGALS3P17931 250 aaKnown RBP16.98■□□□□ 0.31
NKX1-1-201ENST00000422806 FAM229BQ4G0N7 80 aa16.98■□□□□ 0.31
NKX1-1-201ENST00000422806 IGKV2D-26A0A0A0MRZ7 120 aa16.96■□□□□ 0.31
NKX1-1-201ENST00000422806 HIGD2AQ9BW72 106 aa16.96■□□□□ 0.31
NKX1-1-201ENST00000422806 HIST1H2BKO60814 126 aa16.95■□□□□ 0.3
NKX1-1-201ENST00000422806 HIST1H2BJP06899 126 aa16.95■□□□□ 0.3
NKX1-1-201ENST00000422806 HIST1H2BOP23527 126 aa16.95■□□□□ 0.3
NKX1-1-201ENST00000422806 HIST1H2BBP33778 126 aa16.95■□□□□ 0.3
NKX1-1-201ENST00000422806 NMUP48645 174 aa16.95■□□□□ 0.3
NKX1-1-201ENST00000422806 HIST1H2BDP58876 126 aa16.95■□□□□ 0.3
NKX1-1-201ENST00000422806 HIST1H2BCP62807 126 aa16.95■□□□□ 0.3
NKX1-1-201ENST00000422806 PRR4Q16378 134 aa16.95■□□□□ 0.3
NKX1-1-201ENST00000422806 HIST2H2BEQ16778 126 aa16.95■□□□□ 0.3
NKX1-1-201ENST00000422806 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.95■□□□□ 0.3
NKX1-1-201ENST00000422806 HIST1H2BHQ93079 126 aa16.95■□□□□ 0.3
NKX1-1-201ENST00000422806 HIST1H2BNQ99877 126 aa16.95■□□□□ 0.3
NKX1-1-201ENST00000422806 HIST1H2BMQ99879 126 aa16.95■□□□□ 0.3
NKX1-1-201ENST00000422806 DAND5Q8N907 189 aa16.94■□□□□ 0.3
NKX1-1-201ENST00000422806 PRYO14603 147 aa16.93■□□□□ 0.3
NKX1-1-201ENST00000422806 KRTAP13-2Q52LG2 175 aa16.92■□□□□ 0.3
NKX1-1-201ENST00000422806 S100A12P80511 92 aa16.9■□□□□ 0.3
NKX1-1-201ENST00000422806 MIEN1Q9BRT3 115 aa16.9■□□□□ 0.3
NKX1-1-201ENST00000422806 SYS1-DBNDD2H3BUS1 97 aa16.89■□□□□ 0.29
NKX1-1-201ENST00000422806 KCNQ1DNQ9H478 68 aa16.89■□□□□ 0.29
NKX1-1-201ENST00000422806 TRBV10-3A0A0K0K1G6 114 aa16.88■□□□□ 0.29
NKX1-1-201ENST00000422806 LOC107984156A0A0G2JMH3 177 aa16.87■□□□□ 0.29
NKX1-1-201ENST00000422806 ETDCA0A1B0GVM5 59 aa16.87■□□□□ 0.29
NKX1-1-201ENST00000422806 ARL17AQ8IVW1 177 aa16.87■□□□□ 0.29
NKX1-1-201ENST00000422806 LINC00337Q8N6G1 96 aa16.86■□□□□ 0.29
NKX1-1-201ENST00000422806 E9PLD3 99 aa16.85■□□□□ 0.29
NKX1-1-201ENST00000422806 SPRR1AP35321 89 aa16.83■□□□□ 0.28
NKX1-1-201ENST00000422806 LINC00304Q8N9R0 145 aa16.83■□□□□ 0.28
NKX1-1-201ENST00000422806 TRBV10-2A0A0K0K1G8 114 aa16.82■□□□□ 0.28
NKX1-1-201ENST00000422806 ZNF706Q9Y5V0 76 aaPredicted RBP16.82■□□□□ 0.28
NKX1-1-201ENST00000422806 DDTP30046 118 aa16.81■□□□□ 0.28
NKX1-1-201ENST00000422806 SPRR4Q96PI1 79 aa16.81■□□□□ 0.28
NKX1-1-201ENST00000422806 A0A0J9YXY3 114 aa16.8■□□□□ 0.28
NKX1-1-201ENST00000422806 PET117Q6UWS5 81 aa16.8■□□□□ 0.28
NKX1-1-201ENST00000422806 SPANXB1Q9NS25 103 aaPredicted RBP16.8■□□□□ 0.28
NKX1-1-201ENST00000422806 LINC01545Q5VT33 79 aa16.79■□□□□ 0.28
NKX1-1-201ENST00000422806 SMCR5Q8TEV8 140 aa16.79■□□□□ 0.28
NKX1-1-201ENST00000422806 NPC2P61916 151 aa16.78■□□□□ 0.28
NKX1-1-201ENST00000422806 S100A7L2Q5SY68 101 aa16.78■□□□□ 0.28
NKX1-1-201ENST00000422806 KRTAP4-16G5E9R7 235 aaPredicted RBP16.77■□□□□ 0.28
NKX1-1-201ENST00000422806 NDUFC2O95298 119 aa16.77■□□□□ 0.28
NKX1-1-201ENST00000422806 C3orf22Q8N5N4 141 aa16.77■□□□□ 0.28
NKX1-1-201ENST00000422806 ADAMTSL4-AS1Q5T5F5 129 aa16.76■□□□□ 0.27
NKX1-1-201ENST00000422806 C3orf79P0CE67 100 aa16.73■□□□□ 0.27
NKX1-1-201ENST00000422806 B5MCH6 92 aa16.72■□□□□ 0.27
NKX1-1-201ENST00000422806 SOSTDC1Q6X4U4 206 aa16.72■□□□□ 0.27
NKX1-1-201ENST00000422806 KRTDAPP60985 99 aa16.71■□□□□ 0.27
NKX1-1-201ENST00000422806 COA6Q5JTJ3 125 aaKnown RBP16.71■□□□□ 0.27
NKX1-1-201ENST00000422806 PPDPFQ9H3Y8 114 aa16.71■□□□□ 0.27
NKX1-1-201ENST00000422806 IGLV6-57P01721 117 aa16.69■□□□□ 0.26
NKX1-1-201ENST00000422806 MUC2Q02817 5179 aa16.69■□□□□ 0.26
NKX1-1-201ENST00000422806 EIF4EBP3O60516 100 aaPredicted RBP16.68■□□□□ 0.26
NKX1-1-201ENST00000422806 ZNF815PA8K554 130 aa16.67■□□□□ 0.26
NKX1-1-201ENST00000422806 RETNLBQ9BQ08 111 aa16.67■□□□□ 0.26
NKX1-1-201ENST00000422806 CTAG1AP78358 180 aa16.66■□□□□ 0.26
NKX1-1-201ENST00000422806 TRAV23DV6A0A075B6W5 121 aa16.65■□□□□ 0.26
NKX1-1-201ENST00000422806 TIMM17BO60830 172 aa16.65■□□□□ 0.26
NKX1-1-201ENST00000422806 C4orf48Q5BLP8 95 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms