RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 UQCRQO14949 82 aa10.68□□□□□ -0.7
CDH1-202ENST00000422392 TMEM256-PLSCR3K7ERE1 68 aa10.68□□□□□ -0.7
CDH1-202ENST00000422392 RPL18AQ02543 176 aaKnown RBP10.68□□□□□ -0.7
CDH1-202ENST00000422392 C2orf48Q96LS8 159 aa10.68□□□□□ -0.7
CDH1-202ENST00000422392 WFDC9Q8NEX5 89 aa10.67□□□□□ -0.7
CDH1-202ENST00000422392 A0A1B0GX51 115 aa10.66□□□□□ -0.7
CDH1-202ENST00000422392 SPART-AS1P0CW21 52 aa10.66□□□□□ -0.7
CDH1-202ENST00000422392 COX7CP15954 63 aa10.66□□□□□ -0.7
CDH1-202ENST00000422392 LELP1Q5T871 98 aa10.66□□□□□ -0.7
CDH1-202ENST00000422392 ENHOQ6UWT2 76 aa10.66□□□□□ -0.7
CDH1-202ENST00000422392 JMJD7-PLA2G4BH0Y9G9 81 aa10.65□□□□□ -0.7
CDH1-202ENST00000422392 MIFP14174 115 aa10.65□□□□□ -0.7
CDH1-202ENST00000422392 LINC00575Q6W349 94 aa10.65□□□□□ -0.71
CDH1-202ENST00000422392 XAGE1AQ9HD64 81 aa10.65□□□□□ -0.71
CDH1-202ENST00000422392 ATOX1O00244 68 aa10.64□□□□□ -0.71
CDH1-202ENST00000422392 IGHV4-30-4P0DP06 118 aa10.64□□□□□ -0.71
CDH1-202ENST00000422392 CYSTM1Q9H1C7 97 aa10.64□□□□□ -0.71
CDH1-202ENST00000422392 PRR34Q9NV39 138 aa10.63□□□□□ -0.71
CDH1-202ENST00000422392 TENM3Q9P273 2699 aa10.62□□□□□ -0.71
CDH1-202ENST00000422392 hADV29S1A0JD25 119 aa10.62□□□□□ -0.71
CDH1-202ENST00000422392 C6orf48Q9UBA6 75 aa10.62□□□□□ -0.71
CDH1-202ENST00000422392 A0A0J9YWU9 116 aa10.61□□□□□ -0.71
CDH1-202ENST00000422392 M0R2N4 97 aa10.61□□□□□ -0.71
CDH1-202ENST00000422392 LYPD5Q6UWN5 251 aa10.61□□□□□ -0.71
CDH1-202ENST00000422392 USP17L23D6RBM5 183 aa10.6□□□□□ -0.71
CDH1-202ENST00000422392 TRBV10-3A0A0K0K1G6 114 aa10.6□□□□□ -0.71
CDH1-202ENST00000422392 HIGD2BQ4VC39 106 aa10.6□□□□□ -0.71
CDH1-202ENST00000422392 LAMTOR3Q9UHA4 124 aa10.6□□□□□ -0.71
CDH1-202ENST00000422392 IGLV6-57P01721 117 aa10.59□□□□□ -0.71
CDH1-202ENST00000422392 Q6ZQY7 126 aa10.59□□□□□ -0.71
CDH1-202ENST00000422392 FAM19A1Q7Z5A9 133 aa10.59□□□□□ -0.71
CDH1-202ENST00000422392 WFDC10BQ8IUB3 73 aa10.59□□□□□ -0.71
CDH1-202ENST00000422392 RETNQ9HD89 108 aa10.59□□□□□ -0.71
CDH1-202ENST00000422392 RBM3P98179 157 aaKnown RBP10.57□□□□□ -0.72
CDH1-202ENST00000422392 Q6ZQT0 140 aa10.56□□□□□ -0.72
CDH1-202ENST00000422392 CRYGAP11844 174 aa10.56□□□□□ -0.72
CDH1-202ENST00000422392 TRAV23DV6A0A075B6W5 121 aa10.55□□□□□ -0.72
CDH1-202ENST00000422392 ZNF561-AS1K7EIQ3 104 aa10.55□□□□□ -0.72
CDH1-202ENST00000422392 SERP2Q8N6R1 65 aa10.54□□□□□ -0.72
CDH1-202ENST00000422392 SVIPQ8NHG7 77 aa10.54□□□□□ -0.72
CDH1-202ENST00000422392 UBL5Q9BZL1 73 aa10.54□□□□□ -0.72
CDH1-202ENST00000422392 OXLD1Q5BKU9 147 aa10.53□□□□□ -0.72
CDH1-202ENST00000422392 KPRPQ5T749 579 aaPredicted RBP10.53□□□□□ -0.72
CDH1-202ENST00000422392 GVQW2A0A096LPI5 108 aaPredicted RBP10.52□□□□□ -0.73
CDH1-202ENST00000422392 LOC107984640A0A0U1RRK4 108 aa10.52□□□□□ -0.73
CDH1-202ENST00000422392 CAMK2N2Q96S95 79 aa10.52□□□□□ -0.73
CDH1-202ENST00000422392 DIRC1Q969H9 104 aa10.52□□□□□ -0.73
CDH1-202ENST00000422392 STAB1Q9NY15 2570 aa10.51□□□□□ -0.73
CDH1-202ENST00000422392 Q6ZTC4 211 aa10.51□□□□□ -0.73
CDH1-202ENST00000422392 MUC7Q8TAX7 377 aa10.51□□□□□ -0.73
CDH1-202ENST00000422392 ZNF73O43830 326 aaPredicted RBP10.51□□□□□ -0.73
CDH1-202ENST00000422392 UPK3BQ9BT76 320 aa10.51□□□□□ -0.73
CDH1-202ENST00000422392 Q6ZRU5 148 aa10.5□□□□□ -0.73
CDH1-202ENST00000422392 GHRHP01286 108 aa10.5□□□□□ -0.73
CDH1-202ENST00000422392 DSCR8Q96T75 97 aa10.49□□□□□ -0.73
CDH1-202ENST00000422392 CMYA5Q8N3K9 4069 aa10.49□□□□□ -0.73
CDH1-202ENST00000422392 FLNBO75369 2602 aaKnown RBP10.49□□□□□ -0.73
CDH1-202ENST00000422392 FBN1P35555 2871 aaKnown RBP10.49□□□□□ -0.73
CDH1-202ENST00000422392 ATP5EP2Q5VTU8 51 aa10.49□□□□□ -0.73
CDH1-202ENST00000422392 LOC110117498A0A087WWA1 95 aa10.48□□□□□ -0.73
CDH1-202ENST00000422392 KRTAP26-1Q6PEX3 210 aa10.48□□□□□ -0.73
CDH1-202ENST00000422392 VPREB1P12018 145 aa10.48□□□□□ -0.73
CDH1-202ENST00000422392 HAMPP81172 84 aa10.48□□□□□ -0.73
CDH1-202ENST00000422392 C15orf56Q8N910 161 aa10.48□□□□□ -0.73
CDH1-202ENST00000422392 COX7BP24311 80 aa10.46□□□□□ -0.73
CDH1-202ENST00000422392 KRTAP10-11P60412 298 aa10.46□□□□□ -0.73
CDH1-202ENST00000422392 ESRGQ1W209 222 aa10.46□□□□□ -0.73
CDH1-202ENST00000422392 LINC01547P58512 204 aaPredicted RBP10.46□□□□□ -0.74
CDH1-202ENST00000422392 Q6ZVQ6 151 aa10.46□□□□□ -0.74
CDH1-202ENST00000422392 NOTCH1P46531 2555 aa10.46□□□□□ -0.74
CDH1-202ENST00000422392 ELOF1P60002 83 aaKnown RBP10.45□□□□□ -0.74
CDH1-202ENST00000422392 WIPF1O43516 503 aa10.44□□□□□ -0.74
CDH1-202ENST00000422392 F8P00451 2351 aa10.43□□□□□ -0.74
CDH1-202ENST00000422392 Q6ZRP5 223 aa10.43□□□□□ -0.74
CDH1-202ENST00000422392 SCXQ7RTU7 201 aa10.43□□□□□ -0.74
CDH1-202ENST00000422392 MAST4O15021 2626 aa10.43□□□□□ -0.74
CDH1-202ENST00000422392 IGKV2D-24A0A075B6R9 120 aa10.42□□□□□ -0.74
CDH1-202ENST00000422392 EGFEM1PQ0D2K5 195 aa10.42□□□□□ -0.74
CDH1-202ENST00000422392 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.42□□□□□ -0.74
CDH1-202ENST00000422392 NDUFC2-KCTD14E9PQ53 114 aa10.41□□□□□ -0.74
CDH1-202ENST00000422392 M0R378 163 aa10.4□□□□□ -0.74
CDH1-202ENST00000422392 C1orf43Q9BWL3 253 aa10.4□□□□□ -0.74
CDH1-202ENST00000422392 TRBV7-4A0A0J9YYF1 115 aa10.39□□□□□ -0.75
CDH1-202ENST00000422392 J3KT08 172 aa10.39□□□□□ -0.75
CDH1-202ENST00000422392 C20orf197Q8N268 126 aa10.39□□□□□ -0.75
CDH1-202ENST00000422392 TRAV10A0A0B4J240 114 aa10.38□□□□□ -0.75
CDH1-202ENST00000422392 H3BNG1 76 aa10.38□□□□□ -0.75
CDH1-202ENST00000422392 TMEM258P61165 79 aa10.38□□□□□ -0.75
CDH1-202ENST00000422392 LINC00528Q8N1L1 170 aa10.38□□□□□ -0.75
CDH1-202ENST00000422392 DEFB131BA0A096LNP1 70 aa10.36□□□□□ -0.75
CDH1-202ENST00000422392 DPH3Q96FX2 82 aa10.36□□□□□ -0.75
CDH1-202ENST00000422392 BAHCC1Q9P281 2608 aa10.36□□□□□ -0.75
CDH1-202ENST00000422392 PDE6GP18545 87 aa10.36□□□□□ -0.75
CDH1-202ENST00000422392 TRBV7-6A0A0J9YX20 115 aa10.35□□□□□ -0.75
CDH1-202ENST00000422392 FAM19A5Q7Z5A7 132 aaPredicted RBP10.35□□□□□ -0.75
CDH1-202ENST00000422392 H3BQ85 93 aa10.34□□□□□ -0.75
CDH1-202ENST00000422392 SERTAD4-AS1Q5TG53 156 aa10.34□□□□□ -0.75
CDH1-202ENST00000422392 SYCNQ0VAF6 134 aa10.34□□□□□ -0.75
CDH1-202ENST00000422392 OXTP01178 125 aa10.33□□□□□ -0.76
CDH1-202ENST00000422392 LINC01556Q5JQF7 62 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms