RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 DNAH10OSP0CZ25 163 aa7.43□□□□□ -1.22
PTCH1-206ENST00000421141 PRR3P79522 188 aaKnown RBP7.43□□□□□ -1.22
PTCH1-206ENST00000421141 Q9BRP9 147 aa7.43□□□□□ -1.22
PTCH1-206ENST00000421141 FAM236AA0A1B0GUQ0 79 aa7.43□□□□□ -1.22
PTCH1-206ENST00000421141 FAM236BA0A1B0GV22 79 aa7.43□□□□□ -1.22
PTCH1-206ENST00000421141 KRTAP10-3P60369 221 aa7.42□□□□□ -1.22
PTCH1-206ENST00000421141 KIF25-AS1Q9Y6Z4 181 aa7.42□□□□□ -1.22
PTCH1-206ENST00000421141 LINC00643Q86TS7 51 aa7.42□□□□□ -1.22
PTCH1-206ENST00000421141 C19orf73Q9NVV2 129 aa7.42□□□□□ -1.22
PTCH1-206ENST00000421141 TMEM258P61165 79 aa7.42□□□□□ -1.22
PTCH1-206ENST00000421141 LST1O00453 97 aa7.42□□□□□ -1.22
PTCH1-206ENST00000421141 KRTAP1-1Q07627 177 aa7.41□□□□□ -1.22
PTCH1-206ENST00000421141 Q8N814 137 aa7.41□□□□□ -1.22
PTCH1-206ENST00000421141 C22orf24Q9Y442 160 aa7.41□□□□□ -1.22
PTCH1-206ENST00000421141 XGP55808 180 aa7.4□□□□□ -1.22
PTCH1-206ENST00000421141 LINC00337Q8N6G1 96 aa7.4□□□□□ -1.22
PTCH1-206ENST00000421141 CHD6Q8TD26 2715 aa7.4□□□□□ -1.23
PTCH1-206ENST00000421141 NTM-AS1Q6ZSK4 140 aa7.39□□□□□ -1.23
PTCH1-206ENST00000421141 CSNK1G2-AS1Q8NCQ2 148 aa7.39□□□□□ -1.23
PTCH1-206ENST00000421141 PRLHP81277 87 aa7.39□□□□□ -1.23
PTCH1-206ENST00000421141 SETXQ7Z333 2677 aaKnown RBP7.39□□□□□ -1.23
PTCH1-206ENST00000421141 TM2D3Q9BRN9 247 aa7.39□□□□□ -1.23
PTCH1-206ENST00000421141 EYSQ5T1H1 3165 aa7.39□□□□□ -1.23
PTCH1-206ENST00000421141 SCXQ7RTU7 201 aa7.38□□□□□ -1.23
PTCH1-206ENST00000421141 Q6ZRP5 223 aa7.38□□□□□ -1.23
PTCH1-206ENST00000421141 C2orf91Q6ZV80 131 aa7.38□□□□□ -1.23
PTCH1-206ENST00000421141 IGHV3OR16-9A0A0B4J2B5 98 aa7.37□□□□□ -1.23
PTCH1-206ENST00000421141 ENHOQ6UWT2 76 aa7.37□□□□□ -1.23
PTCH1-206ENST00000421141 SDIM1Q6ZPB5 146 aa7.36□□□□□ -1.23
PTCH1-206ENST00000421141 FRYQ5TBA9 3013 aa7.36□□□□□ -1.23
PTCH1-206ENST00000421141 J3QL48 77 aa7.35□□□□□ -1.23
PTCH1-206ENST00000421141 LINC01546A6NGU7 62 aa7.35□□□□□ -1.23
PTCH1-206ENST00000421141 GCN1Q92616 2671 aaKnown RBP7.35□□□□□ -1.23
PTCH1-206ENST00000421141 TSPEAR-AS2P59090 65 aa7.35□□□□□ -1.23
PTCH1-206ENST00000421141 ADAMTSL4-AS1Q5T5F5 129 aa7.35□□□□□ -1.23
PTCH1-206ENST00000421141 GVQW2A0A096LPI5 108 aaPredicted RBP7.34□□□□□ -1.23
PTCH1-206ENST00000421141 C6orf48Q9UBA6 75 aa7.34□□□□□ -1.23
PTCH1-206ENST00000421141 URB1-AS1Q96HZ7 61 aa7.34□□□□□ -1.23
PTCH1-206ENST00000421141 FAM19A3Q7Z5A8 133 aa7.34□□□□□ -1.24
PTCH1-206ENST00000421141 RPL37AP61513 92 aaKnown RBP7.33□□□□□ -1.24
PTCH1-206ENST00000421141 LINC00336Q6ZUF6 198 aa7.33□□□□□ -1.24
PTCH1-206ENST00000421141 COL6A5A8TX70 2615 aa7.33□□□□□ -1.24
PTCH1-206ENST00000421141 FAM236DA0A1B0GTK5 79 aa7.33□□□□□ -1.24
PTCH1-206ENST00000421141 FAM236CP0DP71 79 aa7.33□□□□□ -1.24
PTCH1-206ENST00000421141 SMCR5Q8TEV8 140 aa7.32□□□□□ -1.24
PTCH1-206ENST00000421141 DMXL2Q8TDJ6 3036 aa7.32□□□□□ -1.24
PTCH1-206ENST00000421141 WFDC13Q8IUB5 93 aa7.32□□□□□ -1.24
PTCH1-206ENST00000421141 B5MCH6 92 aa7.32□□□□□ -1.24
PTCH1-206ENST00000421141 IGLV5-39A0A0G2JS06 123 aa7.31□□□□□ -1.24
PTCH1-206ENST00000421141 BOD1L1Q8NFC6 3051 aa7.31□□□□□ -1.24
PTCH1-206ENST00000421141 IGHV6-1A0A0B4J1U7 121 aa7.31□□□□□ -1.24
PTCH1-206ENST00000421141 LINC00167Q96N53 147 aa7.31□□□□□ -1.24
PTCH1-206ENST00000421141 TYMSOSQ8TAI1 123 aa7.31□□□□□ -1.24
PTCH1-206ENST00000421141 MPLKIPQ8TAP9 179 aa7.31□□□□□ -1.24
PTCH1-206ENST00000421141 A0A087WYN8 130 aa7.31□□□□□ -1.24
PTCH1-206ENST00000421141 Q8N3U1 123 aa7.3□□□□□ -1.24
PTCH1-206ENST00000421141 J3KT08 172 aa7.3□□□□□ -1.24
PTCH1-206ENST00000421141 MOBPQ13875 183 aa7.29□□□□□ -1.24
PTCH1-206ENST00000421141 PHF5AQ7RTV0 110 aaKnown RBP7.29□□□□□ -1.24
PTCH1-206ENST00000421141 CHTF8P0CG12 524 aa7.29□□□□□ -1.24
PTCH1-206ENST00000421141 CRYGAP11844 174 aa7.29□□□□□ -1.24
PTCH1-206ENST00000421141 LINC00575Q6W349 94 aa7.29□□□□□ -1.24
PTCH1-206ENST00000421141 Q6ZVQ6 151 aa7.29□□□□□ -1.24
PTCH1-206ENST00000421141 REV3LO60673 3130 aa7.29□□□□□ -1.24
PTCH1-206ENST00000421141 A8MTW9 85 aa7.29□□□□□ -1.24
PTCH1-206ENST00000421141 SPTSSBQ8NFR3 76 aa7.28□□□□□ -1.24
PTCH1-206ENST00000421141 A0A096LNJ9 63 aa7.28□□□□□ -1.24
PTCH1-206ENST00000421141 LRBAP50851 2863 aa7.28□□□□□ -1.24
PTCH1-206ENST00000421141 IGLV5-45A0A087WSX0 123 aa7.28□□□□□ -1.24
PTCH1-206ENST00000421141 PRR4Q16378 134 aa7.28□□□□□ -1.24
PTCH1-206ENST00000421141 UNC79Q9P2D8 2635 aa7.28□□□□□ -1.24
PTCH1-206ENST00000421141 TRBV7-6A0A0J9YX20 115 aa7.27□□□□□ -1.25
PTCH1-206ENST00000421141 LINC00310P59036 64 aa7.27□□□□□ -1.25
PTCH1-206ENST00000421141 UTP20O75691 2785 aaKnown RBP7.27□□□□□ -1.25
PTCH1-206ENST00000421141 SPACA4Q8TDM5 124 aa7.26□□□□□ -1.25
PTCH1-206ENST00000421141 Q9UF83 564 aa7.26□□□□□ -1.25
PTCH1-206ENST00000421141 DMXL1Q9Y485 3027 aa7.26□□□□□ -1.25
PTCH1-206ENST00000421141 C3orf22Q8N5N4 141 aa7.25□□□□□ -1.25
PTCH1-206ENST00000421141 A0A087WSZ3 146 aa7.25□□□□□ -1.25
PTCH1-206ENST00000421141 BCE1O60756 84 aa7.25□□□□□ -1.25
PTCH1-206ENST00000421141 PRR15LQ9BU68 103 aa7.25□□□□□ -1.25
PTCH1-206ENST00000421141 GIG44P09565 113 aaPredicted RBP7.24□□□□□ -1.25
PTCH1-206ENST00000421141 EPM2AB3EWF7 344 aa7.23□□□□□ -1.25
PTCH1-206ENST00000421141 Q8N9L7 120 aa7.23□□□□□ -1.25
PTCH1-206ENST00000421141 IMUPQ9GZP8 106 aa7.23□□□□□ -1.25
PTCH1-206ENST00000421141 NDUFC1O43677 76 aa7.22□□□□□ -1.25
PTCH1-206ENST00000421141 A0A087WTM6 91 aa7.22□□□□□ -1.25
PTCH1-206ENST00000421141 K7ERS5 55 aa7.22□□□□□ -1.25
PTCH1-206ENST00000421141 FAM30AQ9NZY2 134 aa7.22□□□□□ -1.25
PTCH1-206ENST00000421141 FLNCQ14315 2725 aa7.21□□□□□ -1.26
PTCH1-206ENST00000421141 Q8NBF4 154 aa7.21□□□□□ -1.26
PTCH1-206ENST00000421141 Q6ZRX8 168 aa7.21□□□□□ -1.26
PTCH1-206ENST00000421141 SERP1Q9Y6X1 66 aa7.21□□□□□ -1.26
PTCH1-206ENST00000421141 KIAA0087Q14695 138 aa7.21□□□□□ -1.26
PTCH1-206ENST00000421141 STAB1Q9NY15 2570 aa7.2□□□□□ -1.26
PTCH1-206ENST00000421141 APLNQ9ULZ1 77 aa7.2□□□□□ -1.26
PTCH1-206ENST00000421141 LINC01547P58512 204 aaPredicted RBP7.2□□□□□ -1.26
PTCH1-206ENST00000421141 CASC10Q5T4H9 136 aa7.19□□□□□ -1.26
PTCH1-206ENST00000421141 C20orf197Q8N268 126 aa7.19□□□□□ -1.26
PTCH1-206ENST00000421141 BRK1Q8WUW1 75 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms