RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 TINCRA0A1B0GVN0 87 aa4.12□□□□□ -1.75
RFX3-205ENST00000420720 IGKV2D-28P01615 120 aa4.12□□□□□ -1.75
RFX3-205ENST00000420720 SPINK8P0C7L1 97 aa4.12□□□□□ -1.75
RFX3-205ENST00000420720 LINC00304Q8N9R0 145 aa4.12□□□□□ -1.75
RFX3-205ENST00000420720 IGLV5-45A0A087WSX0 123 aa4.11□□□□□ -1.75
RFX3-205ENST00000420720 IGKV2D-26A0A0A0MRZ7 120 aa4.11□□□□□ -1.75
RFX3-205ENST00000420720 PFN2P35080 140 aa4.11□□□□□ -1.75
RFX3-205ENST00000420720 PRLHP81277 87 aa4.11□□□□□ -1.75
RFX3-205ENST00000420720 FAM229BQ4G0N7 80 aa4.11□□□□□ -1.75
RFX3-205ENST00000420720 FAM19A1Q7Z5A9 133 aa4.11□□□□□ -1.75
RFX3-205ENST00000420720 IGLV7-46A0A075B6I9 117 aa4.1□□□□□ -1.75
RFX3-205ENST00000420720 ATP5LO75964 103 aa4.1□□□□□ -1.75
RFX3-205ENST00000420720 CST9LQ9H4G1 147 aa4.1□□□□□ -1.75
RFX3-205ENST00000420720 TMEM238C9JI98 176 aa4.09□□□□□ -1.75
RFX3-205ENST00000420720 VPREB1P12018 145 aa4.09□□□□□ -1.75
RFX3-205ENST00000420720 PMVKQ15126 192 aa4.09□□□□□ -1.75
RFX3-205ENST00000420720 TPRXLQ17RH7 258 aa4.09□□□□□ -1.75
RFX3-205ENST00000420720 C3orf22Q8N5N4 141 aa4.09□□□□□ -1.75
RFX3-205ENST00000420720 TMEM126AQ9H061 195 aa4.09□□□□□ -1.75
RFX3-205ENST00000420720 LINC01549A6NIU2 74 aa4.08□□□□□ -1.76
RFX3-205ENST00000420720 H3BRM9 83 aa4.08□□□□□ -1.76
RFX3-205ENST00000420720 M0R378 163 aa4.08□□□□□ -1.76
RFX3-205ENST00000420720 PLEKHB2Q96CS7 222 aa4.08□□□□□ -1.76
RFX3-205ENST00000420720 ZNF625Q96I27 306 aaPredicted RBP4.08□□□□□ -1.76
RFX3-205ENST00000420720 PPDPFQ9H3Y8 114 aa4.08□□□□□ -1.76
RFX3-205ENST00000420720 LINC01546A6NGU7 62 aa4.07□□□□□ -1.76
RFX3-205ENST00000420720 NDUFA6P56556 154 aa4.07□□□□□ -1.76
RFX3-205ENST00000420720 RAB14P61106 215 aa4.07□□□□□ -1.76
RFX3-205ENST00000420720 RPL24P83731 157 aaKnown RBP4.07□□□□□ -1.76
RFX3-205ENST00000420720 FA2HQ7L5A8 372 aa4.07□□□□□ -1.76
RFX3-205ENST00000420720 CBLN2Q8IUK8 224 aa4.07□□□□□ -1.76
RFX3-205ENST00000420720 Q8NDZ9 215 aa4.07□□□□□ -1.76
RFX3-205ENST00000420720 HIGD2AQ9BW72 106 aa4.07□□□□□ -1.76
RFX3-205ENST00000420720 SND1-IT1Q9HBX3 110 aa4.07□□□□□ -1.76
RFX3-205ENST00000420720 SMCO4Q9NRQ5 59 aa4.07□□□□□ -1.76
RFX3-205ENST00000420720 ERG28Q9UKR5 140 aa4.07□□□□□ -1.76
RFX3-205ENST00000420720 IGLV5-39A0A0G2JS06 123 aa4.06□□□□□ -1.76
RFX3-205ENST00000420720 IGLC3P0DOY3 106 aa4.06□□□□□ -1.76
RFX3-205ENST00000420720 ZNF22P17026 224 aaPredicted RBP4.06□□□□□ -1.76
RFX3-205ENST00000420720 CTAG1AP78358 180 aa4.06□□□□□ -1.76
RFX3-205ENST00000420720 GNB1LQ9BYB4 327 aa4.06□□□□□ -1.76
RFX3-205ENST00000420720 NEBP20929 6669 aa4.05□□□□□ -1.76
RFX3-205ENST00000420720 TRAV9-1A0A075B6T8 112 aa4.05□□□□□ -1.76
RFX3-205ENST00000420720 S100PP25815 95 aa4.05□□□□□ -1.76
RFX3-205ENST00000420720 LINC01547P58512 204 aaPredicted RBP4.05□□□□□ -1.76
RFX3-205ENST00000420720 FABP9Q0Z7S8 132 aa4.05□□□□□ -1.76
RFX3-205ENST00000420720 SPAG11AQ6PDA7 123 aa4.05□□□□□ -1.76
RFX3-205ENST00000420720 A0A0U1RRA0 63 aa4.04□□□□□ -1.76
RFX3-205ENST00000420720 LINC00158P58513 81 aa4.04□□□□□ -1.76
RFX3-205ENST00000420720 COX17Q14061 63 aa4.04□□□□□ -1.76
RFX3-205ENST00000420720 DAND5Q8N907 189 aa4.04□□□□□ -1.76
RFX3-205ENST00000420720 SPRR4Q96PI1 79 aa4.04□□□□□ -1.76
RFX3-205ENST00000420720 A0A096LNJ9 63 aa4.03□□□□□ -1.76
RFX3-205ENST00000420720 TMEM218A2RU14 115 aa4.03□□□□□ -1.76
RFX3-205ENST00000420720 C11orf86A6NJI1 115 aa4.03□□□□□ -1.76
RFX3-205ENST00000420720 COX19Q49B96 90 aa4.03□□□□□ -1.76
RFX3-205ENST00000420720 CLLU1Q5K131 121 aa4.03□□□□□ -1.76
RFX3-205ENST00000420720 TMEM170BQ5T4T1 132 aa4.03□□□□□ -1.76
RFX3-205ENST00000420720 BAGE3Q86Y29 109 aa4.03□□□□□ -1.76
RFX3-205ENST00000420720 LINC00337Q8N6G1 96 aa4.03□□□□□ -1.76
RFX3-205ENST00000420720 URB1-AS1Q96HZ7 61 aa4.03□□□□□ -1.76
RFX3-205ENST00000420720 PMCHL1Q16048 86 aa4.02□□□□□ -1.77
RFX3-205ENST00000420720 FP248Q71RG6 208 aaPredicted RBP4.02□□□□□ -1.77
RFX3-205ENST00000420720 Q8NBF4 154 aa4.02□□□□□ -1.77
RFX3-205ENST00000420720 SMCR5Q8TEV8 140 aa4.02□□□□□ -1.77
RFX3-205ENST00000420720 HBDP02042 147 aa4.01□□□□□ -1.77
RFX3-205ENST00000420720 LINC00614P0C842 121 aa4.01□□□□□ -1.77
RFX3-205ENST00000420720 KRTAP13-3Q3SY46 172 aa4.01□□□□□ -1.77
RFX3-205ENST00000420720 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
RFX3-205ENST00000420720 UQCC3Q6UW78 93 aa4.01□□□□□ -1.77
RFX3-205ENST00000420720 KRTAP4-1Q9BYQ7 146 aa4.01□□□□□ -1.77
RFX3-205ENST00000420720 ZNF706Q9Y5V0 76 aaPredicted RBP4.01□□□□□ -1.77
RFX3-205ENST00000420720 PRYO14603 147 aa4□□□□□ -1.77
RFX3-205ENST00000420720 NCR3O14931 201 aa4□□□□□ -1.77
RFX3-205ENST00000420720 SMIM13P0DJ93 91 aa4□□□□□ -1.77
RFX3-205ENST00000420720 ASB16-AS1Q495Z4 193 aa4□□□□□ -1.77
RFX3-205ENST00000420720 MEIG1Q5JSS6 88 aa4□□□□□ -1.77
RFX3-205ENST00000420720 SFTA2Q6UW10 78 aa4□□□□□ -1.77
RFX3-205ENST00000420720 C18orf32Q8TCD1 76 aa4□□□□□ -1.77
RFX3-205ENST00000420720 SEC11CQ9BY50 192 aa4□□□□□ -1.77
RFX3-205ENST00000420720 CHTOPQ9Y3Y2 248 aaKnown RBP4□□□□□ -1.77
RFX3-205ENST00000420720 ETDCA0A1B0GVM5 59 aa3.99□□□□□ -1.77
RFX3-205ENST00000420720 ATP6V1G1O75348 118 aa3.99□□□□□ -1.77
RFX3-205ENST00000420720 SPINK1P00995 79 aa3.99□□□□□ -1.77
RFX3-205ENST00000420720 SPRR1AP35321 89 aa3.99□□□□□ -1.77
RFX3-205ENST00000420720 BOD1L2Q8IYS8 172 aa3.99□□□□□ -1.77
RFX3-205ENST00000420720 MIR7-3HGQ8N6C7 128 aa3.99□□□□□ -1.77
RFX3-205ENST00000420720 RPS10P5Q9NQ39 176 aa3.99□□□□□ -1.77
RFX3-205ENST00000420720 TRAPPC1Q9Y5R8 145 aa3.99□□□□□ -1.77
RFX3-205ENST00000420720 IGLV9-49A0A0B4J1Y8 123 aa3.98□□□□□ -1.77
RFX3-205ENST00000420720 TMEM223A0PJW6 202 aa3.98□□□□□ -1.77
RFX3-205ENST00000420720 B5MCH6 92 aa3.98□□□□□ -1.77
RFX3-205ENST00000420720 SEC61BP60468 96 aaKnown RBP3.98□□□□□ -1.77
RFX3-205ENST00000420720 GAGE2AQ6NT46 116 aa3.98□□□□□ -1.77
RFX3-205ENST00000420720 KCNQ1DNQ9H478 68 aa3.98□□□□□ -1.77
RFX3-205ENST00000420720 TRBV10-3A0A0K0K1G6 114 aa3.97□□□□□ -1.77
RFX3-205ENST00000420720 KRTAP4-16G5E9R7 235 aaPredicted RBP3.97□□□□□ -1.77
RFX3-205ENST00000420720 IFITM2Q01629 132 aa3.97□□□□□ -1.77
RFX3-205ENST00000420720 MOBPQ13875 183 aa3.97□□□□□ -1.77
RFX3-205ENST00000420720 ERC2-IT1O76042 136 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms