RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 NCR3O14931 201 aa5.9□□□□□ -1.46
SNCA-206ENST00000420646 TRAV13-2A0A0B4J235 113 aa5.9□□□□□ -1.47
SNCA-206ENST00000420646 SLPIP03973 132 aa5.9□□□□□ -1.47
SNCA-206ENST00000420646 SNCGO76070 127 aa5.89□□□□□ -1.47
SNCA-206ENST00000420646 NDUFV3P56181 108 aaKnown RBP5.89□□□□□ -1.47
SNCA-206ENST00000420646 GAGE2BQ13066 116 aa5.89□□□□□ -1.47
SNCA-206ENST00000420646 GAGE2EQ4V326 116 aa5.89□□□□□ -1.47
SNCA-206ENST00000420646 GAGE2DQ9UEU5 116 aa5.89□□□□□ -1.47
SNCA-206ENST00000420646 DNAH9Q9NYC9 4486 aa5.88□□□□□ -1.47
SNCA-206ENST00000420646 IGKV2D-24A0A075B6R9 120 aa5.88□□□□□ -1.47
SNCA-206ENST00000420646 M0QXV9 152 aa5.88□□□□□ -1.47
SNCA-206ENST00000420646 RPL28P46779 137 aaKnown RBP5.88□□□□□ -1.47
SNCA-206ENST00000420646 C9orf129Q5T035 196 aaKnown RBP5.88□□□□□ -1.47
SNCA-206ENST00000420646 C6orf48Q9UBA6 75 aa5.88□□□□□ -1.47
SNCA-206ENST00000420646 KLK5Q9Y337 293 aaPredicted RBP5.88□□□□□ -1.47
SNCA-206ENST00000420646 TTC32Q5I0X7 151 aa5.87□□□□□ -1.47
SNCA-206ENST00000420646 KRTAP26-1Q6PEX3 210 aa5.87□□□□□ -1.47
SNCA-206ENST00000420646 BAALC-AS2P0C853 105 aa5.86□□□□□ -1.47
SNCA-206ENST00000420646 C22orf24Q9Y442 160 aa5.86□□□□□ -1.47
SNCA-206ENST00000420646 H3BNG1 76 aa5.86□□□□□ -1.47
SNCA-206ENST00000420646 LECT2O14960 151 aa5.86□□□□□ -1.47
SNCA-206ENST00000420646 CASC10Q5T4H9 136 aa5.86□□□□□ -1.47
SNCA-206ENST00000420646 RPL18AQ02543 176 aaKnown RBP5.85□□□□□ -1.47
SNCA-206ENST00000420646 TM2D3Q9BRN9 247 aa5.85□□□□□ -1.47
SNCA-206ENST00000420646 LINC00588Q9Y4M8 146 aa5.85□□□□□ -1.47
SNCA-206ENST00000420646 ZNF561-AS1K7EIQ3 104 aa5.85□□□□□ -1.47
SNCA-206ENST00000420646 LINC01561Q8N1V8 128 aa5.85□□□□□ -1.47
SNCA-206ENST00000420646 C15orf56Q8N910 161 aa5.85□□□□□ -1.47
SNCA-206ENST00000420646 CXCL5P42830 114 aa5.85□□□□□ -1.47
SNCA-206ENST00000420646 Q6Q795 121 aa5.85□□□□□ -1.47
SNCA-206ENST00000420646 Q6ZRU5 148 aa5.85□□□□□ -1.47
SNCA-206ENST00000420646 PRKDCP78527 4128 aaKnown RBP5.84□□□□□ -1.47
SNCA-206ENST00000420646 H3BT86 120 aa5.84□□□□□ -1.47
SNCA-206ENST00000420646 CAMK2N2Q96S95 79 aa5.84□□□□□ -1.47
SNCA-206ENST00000420646 C1orf43Q9BWL3 253 aa5.84□□□□□ -1.47
SNCA-206ENST00000420646 COX17Q14061 63 aa5.84□□□□□ -1.47
SNCA-206ENST00000420646 PLECQ15149 4684 aaKnown RBP5.84□□□□□ -1.48
SNCA-206ENST00000420646 C6orf99Q4VX62 202 aa5.83□□□□□ -1.48
SNCA-206ENST00000420646 DNAH1Q9P2D7 4330 aa5.83□□□□□ -1.48
SNCA-206ENST00000420646 TRAV10A0A0B4J240 114 aa5.83□□□□□ -1.48
SNCA-206ENST00000420646 LOC107984640A0A0U1RRK4 108 aa5.83□□□□□ -1.48
SNCA-206ENST00000420646 LINC01556Q5JQF7 62 aa5.83□□□□□ -1.48
SNCA-206ENST00000420646 S100A7L2Q5SY68 101 aa5.83□□□□□ -1.48
SNCA-206ENST00000420646 TRACP01848 142 aa5.82□□□□□ -1.48
SNCA-206ENST00000420646 DNAL4O96015 105 aa5.82□□□□□ -1.48
SNCA-206ENST00000420646 C15orf53Q8NAA6 179 aa5.82□□□□□ -1.48
SNCA-206ENST00000420646 TMEM126AQ9H061 195 aa5.81□□□□□ -1.48
SNCA-206ENST00000420646 Q6ZRP5 223 aa5.8□□□□□ -1.48
SNCA-206ENST00000420646 SRRM2Q9UQ35 2752 aaKnown RBP5.8□□□□□ -1.48
SNCA-206ENST00000420646 TRBV10-3A0A0K0K1G6 114 aa5.8□□□□□ -1.48
SNCA-206ENST00000420646 LINC01600Q96MT4 127 aa5.8□□□□□ -1.48
SNCA-206ENST00000420646 C14orf132Q9NPU4 83 aa5.8□□□□□ -1.48
SNCA-206ENST00000420646 NDUFC2O95298 119 aa5.79□□□□□ -1.48
SNCA-206ENST00000420646 DNAH10OSP0CZ25 163 aa5.79□□□□□ -1.48
SNCA-206ENST00000420646 H0YGX0 51 aa5.79□□□□□ -1.48
SNCA-206ENST00000420646 STARD9Q9P2P6 4700 aa5.78□□□□□ -1.48
SNCA-206ENST00000420646 KRTAP1-5Q9BYS1 174 aa5.78□□□□□ -1.48
SNCA-206ENST00000420646 GAGE2AQ6NT46 116 aa5.77□□□□□ -1.49
SNCA-206ENST00000420646 Q8N814 137 aa5.77□□□□□ -1.49
SNCA-206ENST00000420646 GVQW2A0A096LPI5 108 aaPredicted RBP5.77□□□□□ -1.49
SNCA-206ENST00000420646 USP17L23D6RBM5 183 aa5.77□□□□□ -1.49
SNCA-206ENST00000420646 SYCNQ0VAF6 134 aa5.77□□□□□ -1.49
SNCA-206ENST00000420646 FAM168BA1KXE4 195 aa5.76□□□□□ -1.49
SNCA-206ENST00000420646 NDUFC2-KCTD14E9PQ53 114 aa5.76□□□□□ -1.49
SNCA-206ENST00000420646 IGLV6-57P01721 117 aa5.76□□□□□ -1.49
SNCA-206ENST00000420646 SMCR5Q8TEV8 140 aa5.76□□□□□ -1.49
SNCA-206ENST00000420646 FAM240AA0A1B0GVK7 77 aa5.75□□□□□ -1.49
SNCA-206ENST00000420646 VPREB1P12018 145 aa5.75□□□□□ -1.49
SNCA-206ENST00000420646 SERTAD4-AS1Q5TG53 156 aa5.75□□□□□ -1.49
SNCA-206ENST00000420646 ORMDL1Q9P0S3 153 aa5.75□□□□□ -1.49
SNCA-206ENST00000420646 TRBV7-7A0A0K0K1E9 115 aa5.74□□□□□ -1.49
SNCA-206ENST00000420646 TRAV23DV6A0A075B6W5 121 aa5.74□□□□□ -1.49
SNCA-206ENST00000420646 LINC00575Q6W349 94 aa5.74□□□□□ -1.49
SNCA-206ENST00000420646 RPL37AP8A6NKH3 93 aa5.73□□□□□ -1.49
SNCA-206ENST00000420646 C2orf48Q96LS8 159 aa5.73□□□□□ -1.49
SNCA-206ENST00000420646 C5orf47Q569G3 176 aa5.73□□□□□ -1.49
SNCA-206ENST00000420646 Q6ZQY7 126 aa5.73□□□□□ -1.49
SNCA-206ENST00000420646 KMT2AQ03164 3969 aa5.73□□□□□ -1.49
SNCA-206ENST00000420646 hADV29S1A0JD25 119 aa5.72□□□□□ -1.49
SNCA-206ENST00000420646 ZNF73O43830 326 aaPredicted RBP5.72□□□□□ -1.49
SNCA-206ENST00000420646 FAM19A5Q7Z5A7 132 aaPredicted RBP5.72□□□□□ -1.49
SNCA-206ENST00000420646 FAM236AA0A1B0GUQ0 79 aa5.72□□□□□ -1.49
SNCA-206ENST00000420646 FAM236BA0A1B0GV22 79 aa5.72□□□□□ -1.49
SNCA-206ENST00000420646 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.71□□□□□ -1.5
SNCA-206ENST00000420646 C9orf153Q5TBE3 101 aa5.71□□□□□ -1.5
SNCA-206ENST00000420646 UBE2DNLQ8IWF7 75 aa5.71□□□□□ -1.5
SNCA-206ENST00000420646 KRTAP7-1Q8IUC3 87 aa5.7□□□□□ -1.5
SNCA-206ENST00000420646 DIRC1Q969H9 104 aa5.7□□□□□ -1.5
SNCA-206ENST00000420646 IMUPQ9GZP8 106 aa5.7□□□□□ -1.5
SNCA-206ENST00000420646 LINC00846Q9NV44 126 aa5.7□□□□□ -1.5
SNCA-206ENST00000420646 M0R378 163 aa5.7□□□□□ -1.5
SNCA-206ENST00000420646 INAFM2P0DMQ5 153 aa5.7□□□□□ -1.5
SNCA-206ENST00000420646 LINC00167Q96N53 147 aa5.7□□□□□ -1.5
SNCA-206ENST00000420646 B9D2Q9BPU9 175 aa5.7□□□□□ -1.5
SNCA-206ENST00000420646 APLNQ9ULZ1 77 aa5.7□□□□□ -1.5
SNCA-206ENST00000420646 KMT2CQ8NEZ4 4911 aaKnown RBP5.69□□□□□ -1.5
SNCA-206ENST00000420646 M0R2N4 97 aa5.69□□□□□ -1.5
SNCA-206ENST00000420646 C7orf33Q8WU49 177 aa5.69□□□□□ -1.5
SNCA-206ENST00000420646 OBSCN-AS1Q96MR7 158 aa5.69□□□□□ -1.5
SNCA-206ENST00000420646 IGKV2-24A0A0C4DH68 120 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 494.8 ms